Protein–RNA interactions for Protein: P42574

CASP3, Caspase-3, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3P42574 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.72□□□□□ -2.29
CASP3P42574 AC004941.2-201ENST00000427009 228 ntBASIC0.72□□□□□ -2.29
CASP3P42574 AL160004.2-201ENST00000432935 350 ntBASIC0.72□□□□□ -2.29
CASP3P42574 RNU7-115P-201ENST00000516433 55 ntBASIC0.72□□□□□ -2.29
CASP3P42574 RNU6-1110P-201ENST00000516462 101 ntBASIC0.72□□□□□ -2.29
CASP3P42574 AC127455.1-201ENST00000565496 145 ntBASIC0.72□□□□□ -2.29
CASP3P42574 MIR5188-201ENST00000583467 113 ntBASIC0.72□□□□□ -2.29
CASP3P42574 RNU6-94P-201ENST00000607728 107 ntBASIC0.72□□□□□ -2.29
CASP3P42574 AL132765.2-201ENST00000610812 351 ntBASIC0.72□□□□□ -2.29
CASP3P42574 AC108706.1-201ENST00000611053 297 ntBASIC0.72□□□□□ -2.29
CASP3P42574 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.72□□□□□ -2.29
CASP3P42574 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CASP3P42574 Y_RNA.70-201ENST00000362886 110 ntBASIC0.71□□□□□ -2.3
CASP3P42574 U8.7-201ENST00000364940 136 ntBASIC0.71□□□□□ -2.3
CASP3P42574 Y_RNA.370-201ENST00000365589 108 ntBASIC0.71□□□□□ -2.3
CASP3P42574 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.71□□□□□ -2.3
CASP3P42574 SNORD99-201ENST00000408612 74 ntBASIC0.71□□□□□ -2.3
CASP3P42574 MIR548J-201ENST00000408833 112 ntBASIC0.71□□□□□ -2.3
CASP3P42574 AC236972.2-201ENST00000434979 310 ntBASIC0.71□□□□□ -2.3
CASP3P42574 AL355375.2-201ENST00000574825 175 ntBASIC0.71□□□□□ -2.3
CASP3P42574 MIR548AR-201ENST00000582191 57 ntBASIC0.71□□□□□ -2.3
CASP3P42574 AC122108.2-201ENST00000611946 526 ntBASIC0.71□□□□□ -2.3
CASP3P42574 Pinc.1-201ENST00000616452 154 ntBASIC0.71□□□□□ -2.3
CASP3P42574 MIR6788-201ENST00000618842 66 ntBASIC0.71□□□□□ -2.3
CASP3P42574 AC091925.1-201ENST00000623204 462 ntBASIC0.71□□□□□ -2.3
CASP3P42574 Y_RNA.116-201ENST00000363292 103 ntBASIC0.7□□□□□ -2.3
CASP3P42574 RNU6-1209P-201ENST00000363655 107 ntBASIC0.7□□□□□ -2.3
CASP3P42574 Y_RNA.242-201ENST00000364473 110 ntBASIC0.7□□□□□ -2.3
CASP3P42574 SNORD113.3-201ENST00000364630 78 ntBASIC0.7□□□□□ -2.3
CASP3P42574 RNU6-1335P-201ENST00000365426 107 ntBASIC0.7□□□□□ -2.3
CASP3P42574 Y_RNA.458-201ENST00000384240 102 ntBASIC0.7□□□□□ -2.3
CASP3P42574 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.7□□□□□ -2.3
CASP3P42574 Y_RNA.632-201ENST00000459189 102 ntBASIC0.7□□□□□ -2.3
CASP3P42574 AC036111.3-201ENST00000526389 112 ntBASIC0.7□□□□□ -2.3
CASP3P42574 CYP3A137P-201ENST00000562436 69 ntBASIC0.7□□□□□ -2.3
CASP3P42574 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
CASP3P42574 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.69□□□□□ -2.3
CASP3P42574 SNORA72.1-201ENST00000363485 129 ntBASIC0.69□□□□□ -2.3
CASP3P42574 SNORA2B-201ENST00000384583 137 ntBASIC0.69□□□□□ -2.3
CASP3P42574 RNU6-1248P-201ENST00000391096 64 ntBASIC0.69□□□□□ -2.3
CASP3P42574 RBMX2P4-201ENST00000441256 376 ntBASIC0.69□□□□□ -2.3
CASP3P42574 U8.20-201ENST00000459445 131 ntBASIC0.69□□□□□ -2.3
CASP3P42574 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.69□□□□□ -2.3
CASP3P42574 SNORA40.14-201ENST00000516543 86 ntBASIC0.69□□□□□ -2.3
CASP3P42574 MIR3145-201ENST00000580727 82 ntBASIC0.69□□□□□ -2.3
CASP3P42574 MIR4300-201ENST00000581016 96 ntBASIC0.69□□□□□ -2.3
CASP3P42574 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.69□□□□□ -2.3
CASP3P42574 RNY3-201ENST00000365484 102 ntBASIC0.68□□□□□ -2.3
CASP3P42574 Y_RNA.390-201ENST00000383932 102 ntBASIC0.68□□□□□ -2.3
CASP3P42574 Y_RNA.551-201ENST00000384661 102 ntBASIC0.68□□□□□ -2.3
CASP3P42574 SNORD28B-201ENST00000390993 75 ntBASIC0.68□□□□□ -2.3
CASP3P42574 RNU4-30P-201ENST00000410245 143 ntBASIC0.68□□□□□ -2.3
CASP3P42574 AF228730.4-201ENST00000421457 183 ntBASIC0.68□□□□□ -2.3
CASP3P42574 MTND1P14-201ENST00000427400 950 ntBASIC0.68□□□□□ -2.3
CASP3P42574 HMGN1P10-201ENST00000474557 553 ntBASIC0.68□□□□□ -2.3
CASP3P42574 COX6CP6-201ENST00000490840 228 ntBASIC0.68□□□□□ -2.3
CASP3P42574 AC082651.2-201ENST00000496833 166 ntBASIC0.68□□□□□ -2.3
CASP3P42574 MIR2115-201ENST00000516657 100 ntBASIC0.68□□□□□ -2.3
CASP3P42574 MIR151B-201ENST00000584249 96 ntBASIC0.68□□□□□ -2.3
CASP3P42574 AL606534.2-204ENST00000635008 178 ntBASIC0.68□□□□□ -2.3
CASP3P42574 RNU6-1115P-201ENST00000362490 106 ntBASIC0.67□□□□□ -2.3
CASP3P42574 SNORD81.1-201ENST00000363064 77 ntBASIC0.67□□□□□ -2.3
CASP3P42574 Y_RNA.796-201ENST00000364268 102 ntBASIC0.67□□□□□ -2.3
CASP3P42574 Y_RNA.799-201ENST00000364992 102 ntBASIC0.67□□□□□ -2.3
CASP3P42574 SNORA1.2-201ENST00000365189 134 ntBASIC0.67□□□□□ -2.3
CASP3P42574 RNU1-115P-201ENST00000365329 160 ntBASIC0.67□□□□□ -2.3
CASP3P42574 SNORD63-201ENST00000384262 68 ntBASIC0.67□□□□□ -2.3
CASP3P42574 RNU6-937P-201ENST00000384325 106 ntBASIC0.67□□□□□ -2.3
CASP3P42574 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
CASP3P42574 U8.17-201ENST00000391292 132 ntBASIC0.67□□□□□ -2.3
CASP3P42574 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.67□□□□□ -2.3
CASP3P42574 MTND5P15-201ENST00000434246 349 ntBASIC0.67□□□□□ -2.3
CASP3P42574 POLR2KP2-201ENST00000438155 177 ntBASIC0.67□□□□□ -2.3
CASP3P42574 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.67□□□□□ -2.3
CASP3P42574 RNU7-152P-201ENST00000458982 64 ntBASIC0.67□□□□□ -2.3
CASP3P42574 RNU6-437P-201ENST00000459408 95 ntBASIC0.67□□□□□ -2.3
CASP3P42574 SNORD19B-201ENST00000459623 84 ntBASIC0.67□□□□□ -2.3
CASP3P42574 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.67□□□□□ -2.3
CASP3P42574 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.67□□□□□ -2.3
CASP3P42574 AC012433.1-201ENST00000588916 398 ntBASIC0.67□□□□□ -2.3
CASP3P42574 AL078603.1-201ENST00000603824 313 ntBASIC0.67□□□□□ -2.3
CASP3P42574 MIR6835-201ENST00000621552 64 ntBASIC0.67□□□□□ -2.3
CASP3P42574 MIR6516-201ENST00000630554 81 ntBASIC0.67□□□□□ -2.3
CASP3P42574 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CASP3P42574 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.67□□□□□ -2.3
CASP3P42574 MIR1-1-201ENST00000362147 71 ntBASIC0.66□□□□□ -2.3
CASP3P42574 Y_RNA.143-201ENST00000363520 106 ntBASIC0.66□□□□□ -2.3
CASP3P42574 RNU6-654P-201ENST00000364373 107 ntBASIC0.66□□□□□ -2.3
CASP3P42574 RNU6-396P-201ENST00000365369 105 ntBASIC0.66□□□□□ -2.3
CASP3P42574 SNORA51.10-201ENST00000384418 136 ntBASIC0.66□□□□□ -2.3
CASP3P42574 MIR518E-201ENST00000385252 88 ntBASIC0.66□□□□□ -2.3
CASP3P42574 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.66□□□□□ -2.3
CASP3P42574 SNORA36B-201ENST00000410438 131 ntBASIC0.66□□□□□ -2.3
CASP3P42574 AL392103.1-201ENST00000447000 198 ntBASIC0.66□□□□□ -2.3
CASP3P42574 SCARNA8-201ENST00000515924 131 ntBASIC0.66□□□□□ -2.3
CASP3P42574 RNU6-976P-201ENST00000516086 111 ntBASIC0.66□□□□□ -2.3
CASP3P42574 RNA5SP220-201ENST00000516298 104 ntBASIC0.66□□□□□ -2.3
CASP3P42574 RNU6-830P-201ENST00000516353 107 ntBASIC0.66□□□□□ -2.3
CASP3P42574 RNU4-77P-201ENST00000516692 156 ntBASIC0.66□□□□□ -2.3
CASP3P42574 DEFB108E-201ENST00000524692 240 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms