Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 SNORA25.9-201ENST00000365087 128 ntBASIC1.28□□□□□ -2.2
HADHAP40939 RNU6-290P-201ENST00000365212 101 ntBASIC1.28□□□□□ -2.2
HADHAP40939 RNU6-144P-201ENST00000383951 107 ntBASIC1.28□□□□□ -2.2
HADHAP40939 SNORA25-201ENST00000384384 134 ntBASIC1.28□□□□□ -2.2
HADHAP40939 MIR499A-201ENST00000384903 122 ntBASIC1.28□□□□□ -2.2
HADHAP40939 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
HADHAP40939 SNORD12-201ENST00000391002 90 ntBASIC1.28□□□□□ -2.2
HADHAP40939 SNORA53-201ENST00000391141 249 ntBASIC1.28□□□□□ -2.2
HADHAP40939 SNORA40.6-201ENST00000391153 128 ntBASIC1.28□□□□□ -2.2
HADHAP40939 Y_RNA.602-201ENST00000410535 92 ntBASIC1.28□□□□□ -2.2
HADHAP40939 AC245047.7-201ENST00000440265 293 ntBASIC1.28□□□□□ -2.2
HADHAP40939 AC113195.1-201ENST00000579952 141 ntBASIC1.28□□□□□ -2.2
HADHAP40939 MIR3660-201ENST00000584845 100 ntBASIC1.28□□□□□ -2.2
HADHAP40939 AC044792.1-201ENST00000593294 196 ntBASIC1.28□□□□□ -2.2
HADHAP40939 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.28□□□□□ -2.2
HADHAP40939 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
HADHAP40939 SNORD14E-201ENST00000364009 85 ntBASIC1.27□□□□□ -2.21
HADHAP40939 Y_RNA.418-201ENST00000384029 102 ntBASIC1.27□□□□□ -2.21
HADHAP40939 MIR1287-201ENST00000408492 90 ntBASIC1.27□□□□□ -2.21
HADHAP40939 SNORA36B-201ENST00000410438 131 ntBASIC1.27□□□□□ -2.21
HADHAP40939 RNU7-141P-201ENST00000459304 62 ntBASIC1.27□□□□□ -2.21
HADHAP40939 AC004223.1-201ENST00000479840 271 ntBASIC1.27□□□□□ -2.21
HADHAP40939 SNORA31.2-201ENST00000516019 134 ntBASIC1.27□□□□□ -2.21
HADHAP40939 RN7SKP179-201ENST00000516126 217 ntBASIC1.27□□□□□ -2.21
HADHAP40939 Y_RNA.701-201ENST00000516812 110 ntBASIC1.27□□□□□ -2.21
HADHAP40939 SNORA70.22-201ENST00000517160 124 ntBASIC1.27□□□□□ -2.21
HADHAP40939 MIR4680-201ENST00000580906 66 ntBASIC1.27□□□□□ -2.21
HADHAP40939 AL022345.2-201ENST00000606307 135 ntBASIC1.27□□□□□ -2.21
HADHAP40939 MIR6078-201ENST00000611069 100 ntBASIC1.27□□□□□ -2.21
HADHAP40939 RNU6-801P-201ENST00000364087 105 ntBASIC1.26□□□□□ -2.21
HADHAP40939 RNU6-326P-201ENST00000365480 107 ntBASIC1.26□□□□□ -2.21
HADHAP40939 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.26□□□□□ -2.21
HADHAP40939 MTCYBP6-201ENST00000441810 138 ntBASIC1.26□□□□□ -2.21
HADHAP40939 RPS29P29-201ENST00000456396 171 ntBASIC1.26□□□□□ -2.21
HADHAP40939 SNORD116-28-201ENST00000516123 91 ntBASIC1.26□□□□□ -2.21
HADHAP40939 RNU7-40P-201ENST00000516397 64 ntBASIC1.26□□□□□ -2.21
HADHAP40939 SNORD111.1-201ENST00000516421 86 ntBASIC1.26□□□□□ -2.21
HADHAP40939 AC131281.1-201ENST00000522984 164 ntBASIC1.26□□□□□ -2.21
HADHAP40939 AL356055.1-201ENST00000602528 446 ntBASIC1.26□□□□□ -2.21
HADHAP40939 AC027335.2-201ENST00000624030 375 ntBASIC1.26□□□□□ -2.21
HADHAP40939 AL442644.1-201ENST00000454390 3105 ntBASIC1.26□□□□□ -2.21
HADHAP40939 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HADHAP40939 SNORD50B-201ENST00000364995 70 ntBASIC1.25□□□□□ -2.21
HADHAP40939 AC005534.2-201ENST00000431047 433 ntBASIC1.25□□□□□ -2.21
HADHAP40939 RNU6-947P-201ENST00000516264 106 ntBASIC1.25□□□□□ -2.21
HADHAP40939 RNU6-764P-201ENST00000516396 105 ntBASIC1.25□□□□□ -2.21
HADHAP40939 RNU2-31P-201ENST00000516954 155 ntBASIC1.25□□□□□ -2.21
HADHAP40939 SNORA74.3-201ENST00000517108 154 ntBASIC1.25□□□□□ -2.21
HADHAP40939 AL512605.2-201ENST00000592972 256 ntBASIC1.25□□□□□ -2.21
HADHAP40939 BX284668.6-201ENST00000606899 438 ntBASIC1.25□□□□□ -2.21
HADHAP40939 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
HADHAP40939 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.24□□□□□ -2.21
HADHAP40939 RNU6-1209P-201ENST00000363655 107 ntBASIC1.24□□□□□ -2.21
HADHAP40939 RNU1-124P-201ENST00000363861 145 ntBASIC1.24□□□□□ -2.21
HADHAP40939 Y_RNA.796-201ENST00000364268 102 ntBASIC1.24□□□□□ -2.21
HADHAP40939 Y_RNA.799-201ENST00000364992 102 ntBASIC1.24□□□□□ -2.21
HADHAP40939 SNORA33.2-201ENST00000365413 134 ntBASIC1.24□□□□□ -2.21
HADHAP40939 RNU6-442P-201ENST00000383968 104 ntBASIC1.24□□□□□ -2.21
HADHAP40939 RNU6-1227P-201ENST00000383981 107 ntBASIC1.24□□□□□ -2.21
HADHAP40939 RNU6-639P-201ENST00000384074 107 ntBASIC1.24□□□□□ -2.21
HADHAP40939 RNU6-514P-201ENST00000384208 107 ntBASIC1.24□□□□□ -2.21
HADHAP40939 SNORD38C-201ENST00000384381 69 ntBASIC1.24□□□□□ -2.21
HADHAP40939 RNU6-102P-201ENST00000384485 104 ntBASIC1.24□□□□□ -2.21
HADHAP40939 MIR802-201ENST00000390235 94 ntBASIC1.24□□□□□ -2.21
HADHAP40939 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
HADHAP40939 MTCO1P5-201ENST00000433573 344 ntBASIC1.24□□□□□ -2.21
HADHAP40939 RPS23P4-201ENST00000487908 423 ntBASIC1.24□□□□□ -2.21
HADHAP40939 AL133373.1-201ENST00000497098 94 ntBASIC1.24□□□□□ -2.21
HADHAP40939 Y_RNA.673-201ENST00000516306 88 ntBASIC1.24□□□□□ -2.21
HADHAP40939 RNU7-43P-201ENST00000516554 64 ntBASIC1.24□□□□□ -2.21
HADHAP40939 AC090142.3-201ENST00000519012 385 ntBASIC1.24□□□□□ -2.21
HADHAP40939 Y_RNA.214-201ENST00000364201 112 ntBASIC1.23□□□□□ -2.21
HADHAP40939 Y_RNA.527-201ENST00000384573 102 ntBASIC1.23□□□□□ -2.21
HADHAP40939 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.23□□□□□ -2.21
HADHAP40939 ELOCP20-201ENST00000422460 345 ntBASIC1.23□□□□□ -2.21
HADHAP40939 AC048334.1-201ENST00000477975 159 ntBASIC1.23□□□□□ -2.21
HADHAP40939 RNY3P15-201ENST00000516297 97 ntBASIC1.23□□□□□ -2.21
HADHAP40939 RNA5SP404-201ENST00000517118 132 ntBASIC1.23□□□□□ -2.21
HADHAP40939 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.23□□□□□ -2.21
HADHAP40939 AC005357.1-201ENST00000588399 301 ntBASIC1.23□□□□□ -2.21
HADHAP40939 SNORA25.1-201ENST00000362326 128 ntBASIC1.22□□□□□ -2.21
HADHAP40939 Y_RNA.19-201ENST00000362462 99 ntBASIC1.22□□□□□ -2.21
HADHAP40939 Y_RNA.210-201ENST00000364161 110 ntBASIC1.22□□□□□ -2.21
HADHAP40939 Y_RNA.422-201ENST00000384054 114 ntBASIC1.22□□□□□ -2.21
HADHAP40939 SNORA80D-201ENST00000384488 135 ntBASIC1.22□□□□□ -2.21
HADHAP40939 MIR222-201ENST00000384992 110 ntBASIC1.22□□□□□ -2.21
HADHAP40939 RNU6-910P-201ENST00000390844 107 ntBASIC1.22□□□□□ -2.21
HADHAP40939 SNORA26.5-201ENST00000391215 123 ntBASIC1.22□□□□□ -2.21
HADHAP40939 MIR1276-201ENST00000408707 83 ntBASIC1.22□□□□□ -2.21
HADHAP40939 RNU6-985P-201ENST00000410182 104 ntBASIC1.22□□□□□ -2.21
HADHAP40939 RNU6-121P-201ENST00000410525 99 ntBASIC1.22□□□□□ -2.21
HADHAP40939 AL731563.1-201ENST00000442202 214 ntBASIC1.22□□□□□ -2.21
HADHAP40939 AC023449.1-201ENST00000454464 154 ntBASIC1.22□□□□□ -2.21
HADHAP40939 AC090821.2-201ENST00000523552 176 ntBASIC1.22□□□□□ -2.21
HADHAP40939 MIR516B2-201ENST00000385190 85 ntBASIC1.21□□□□□ -2.22
HADHAP40939 RNU2-14P-201ENST00000411053 191 ntBASIC1.21□□□□□ -2.22
HADHAP40939 AC245047.8-201ENST00000456455 284 ntBASIC1.21□□□□□ -2.22
HADHAP40939 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.21□□□□□ -2.22
HADHAP40939 RNU6-830P-201ENST00000516353 107 ntBASIC1.21□□□□□ -2.22
HADHAP40939 HSPE1P19-201ENST00000603327 295 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms