Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 MIR548AO-201ENST00000579992 96 ntBASIC0.24□□□□□ -2.37
SLC6A1P30531 RBM11P1-201ENST00000604951 799 ntBASIC0.24□□□□□ -2.37
SLC6A1P30531 AL669831.3-213ENST00000636676 183 ntBASIC0.24□□□□□ -2.37
SLC6A1P30531 Y_RNA.72-201ENST00000362894 103 ntBASIC0.23□□□□□ -2.37
SLC6A1P30531 RNA5SP457-201ENST00000363657 124 ntBASIC0.23□□□□□ -2.37
SLC6A1P30531 SNORD45.3-201ENST00000363836 72 ntBASIC0.23□□□□□ -2.37
SLC6A1P30531 SNORD38C-201ENST00000384381 69 ntBASIC0.23□□□□□ -2.37
SLC6A1P30531 RNY3P4-201ENST00000384428 101 ntBASIC0.23□□□□□ -2.37
SLC6A1P30531 MIR625-201ENST00000385047 85 ntBASIC0.23□□□□□ -2.37
SLC6A1P30531 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.23□□□□□ -2.37
SLC6A1P30531 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.23□□□□□ -2.37
SLC6A1P30531 AC023932.2-201ENST00000603176 175 ntBASIC0.23□□□□□ -2.37
SLC6A1P30531 AC080013.6-201ENST00000606185 215 ntBASIC0.23□□□□□ -2.37
SLC6A1P30531 AC011476.5-201ENST00000615594 130 ntBASIC0.23□□□□□ -2.37
SLC6A1P30531 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.23□□□□□ -2.37
SLC6A1P30531 RNU6-626P-201ENST00000363354 107 ntBASIC0.22□□□□□ -2.37
SLC6A1P30531 Y_RNA.205-201ENST00000364128 113 ntBASIC0.22□□□□□ -2.37
SLC6A1P30531 RNU6-396P-201ENST00000365369 105 ntBASIC0.22□□□□□ -2.37
SLC6A1P30531 Y_RNA.577-201ENST00000384794 101 ntBASIC0.22□□□□□ -2.37
SLC6A1P30531 MIR520H-201ENST00000385126 88 ntBASIC0.22□□□□□ -2.37
SLC6A1P30531 SNORD78.2-201ENST00000391076 69 ntBASIC0.22□□□□□ -2.37
SLC6A1P30531 RNU6-1156P-201ENST00000410365 100 ntBASIC0.22□□□□□ -2.37
SLC6A1P30531 RNU6-855P-201ENST00000410395 104 ntBASIC0.22□□□□□ -2.37
SLC6A1P30531 RNU4-14P-201ENST00000410858 122 ntBASIC0.22□□□□□ -2.37
SLC6A1P30531 AC015818.7-201ENST00000428754 109 ntBASIC0.22□□□□□ -2.37
SLC6A1P30531 AC087499.7-201ENST00000441958 109 ntBASIC0.22□□□□□ -2.37
SLC6A1P30531 MTCO3P10-201ENST00000455912 772 ntBASIC0.22□□□□□ -2.37
SLC6A1P30531 HMGN1P10-201ENST00000474557 553 ntBASIC0.22□□□□□ -2.37
SLC6A1P30531 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
SLC6A1P30531 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
SLC6A1P30531 MIR8087-201ENST00000612745 78 ntBASIC0.22□□□□□ -2.37
SLC6A1P30531 MIR377-201ENST00000362145 69 ntBASIC0.21□□□□□ -2.38
SLC6A1P30531 MIR18A-201ENST00000362310 71 ntBASIC0.21□□□□□ -2.38
SLC6A1P30531 RNY3P11-201ENST00000364153 102 ntBASIC0.21□□□□□ -2.38
SLC6A1P30531 RNU6-580P-201ENST00000365159 107 ntBASIC0.21□□□□□ -2.38
SLC6A1P30531 Y_RNA.329-201ENST00000365209 107 ntBASIC0.21□□□□□ -2.38
SLC6A1P30531 RNU6-1323P-201ENST00000384025 107 ntBASIC0.21□□□□□ -2.38
SLC6A1P30531 SNORA51.10-201ENST00000384418 136 ntBASIC0.21□□□□□ -2.38
SLC6A1P30531 MIR520F-201ENST00000384824 87 ntBASIC0.21□□□□□ -2.38
SLC6A1P30531 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
SLC6A1P30531 MIR1277-201ENST00000408536 78 ntBASIC0.21□□□□□ -2.38
SLC6A1P30531 NDUFA4P2-201ENST00000489989 244 ntBASIC0.21□□□□□ -2.38
SLC6A1P30531 RNU6-718P-201ENST00000516166 105 ntBASIC0.21□□□□□ -2.38
SLC6A1P30531 RNU6-830P-201ENST00000516353 107 ntBASIC0.21□□□□□ -2.38
SLC6A1P30531 Pinc.1-201ENST00000616452 154 ntBASIC0.21□□□□□ -2.38
SLC6A1P30531 Y_RNA.203-201ENST00000364106 102 ntBASIC0.2□□□□□ -2.38
SLC6A1P30531 Y_RNA.376-201ENST00000365638 108 ntBASIC0.2□□□□□ -2.38
SLC6A1P30531 RNU6-442P-201ENST00000383968 104 ntBASIC0.2□□□□□ -2.38
SLC6A1P30531 MT-TN-201ENST00000387400 73 ntBASIC0.2□□□□□ -2.38
SLC6A1P30531 U8.17-201ENST00000391292 132 ntBASIC0.2□□□□□ -2.38
SLC6A1P30531 AL590004.1-201ENST00000405321 300 ntBASIC0.2□□□□□ -2.38
SLC6A1P30531 SNORD83.1-201ENST00000411362 77 ntBASIC0.2□□□□□ -2.38
SLC6A1P30531 MCFD2P1-201ENST00000417812 300 ntBASIC0.2□□□□□ -2.38
SLC6A1P30531 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.2□□□□□ -2.38
SLC6A1P30531 MTND4P17-201ENST00000470444 350 ntBASIC0.2□□□□□ -2.38
SLC6A1P30531 AC069439.1-201ENST00000494739 167 ntBASIC0.2□□□□□ -2.38
SLC6A1P30531 RNU7-181P-201ENST00000517234 74 ntBASIC0.2□□□□□ -2.38
SLC6A1P30531 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.2□□□□□ -2.38
SLC6A1P30531 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.2□□□□□ -2.38
SLC6A1P30531 MIR3612-201ENST00000579753 87 ntBASIC0.2□□□□□ -2.38
SLC6A1P30531 AC087685.1-201ENST00000587507 141 ntBASIC0.2□□□□□ -2.38
SLC6A1P30531 AC022441.3-201ENST00000605737 136 ntBASIC0.2□□□□□ -2.38
SLC6A1P30531 AC015726.2-201ENST00000620112 122 ntBASIC0.2□□□□□ -2.38
SLC6A1P30531 MTND1P7-201ENST00000632801 297 ntBASIC0.2□□□□□ -2.38
SLC6A1P30531 AC090625.1-201ENST00000357130 210 ntBASIC0.19□□□□□ -2.38
SLC6A1P30531 RNU6-623P-201ENST00000363143 105 ntBASIC0.19□□□□□ -2.38
SLC6A1P30531 RNU6-268P-201ENST00000364174 107 ntBASIC0.19□□□□□ -2.38
SLC6A1P30531 Y_RNA.230-201ENST00000364348 109 ntBASIC0.19□□□□□ -2.38
SLC6A1P30531 Y_RNA.310-201ENST00000365063 113 ntBASIC0.19□□□□□ -2.38
SLC6A1P30531 Y_RNA.537-201ENST00000384626 109 ntBASIC0.19□□□□□ -2.38
SLC6A1P30531 RNU6-205P-201ENST00000390858 107 ntBASIC0.19□□□□□ -2.38
SLC6A1P30531 MTCO2P33-201ENST00000402100 465 ntBASIC0.19□□□□□ -2.38
SLC6A1P30531 Y_RNA.599-201ENST00000410489 109 ntBASIC0.19□□□□□ -2.38
SLC6A1P30531 Y_RNA.646-201ENST00000410980 101 ntBASIC0.19□□□□□ -2.38
SLC6A1P30531 MTND1P2-201ENST00000430604 821 ntBASIC0.19□□□□□ -2.38
SLC6A1P30531 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.19□□□□□ -2.38
SLC6A1P30531 RNU7-169P-201ENST00000459456 61 ntBASIC0.19□□□□□ -2.38
SLC6A1P30531 AC108740.1-201ENST00000498629 225 ntBASIC0.19□□□□□ -2.38
SLC6A1P30531 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.19□□□□□ -2.38
SLC6A1P30531 RNU7-116P-201ENST00000516940 62 ntBASIC0.19□□□□□ -2.38
SLC6A1P30531 AC024405.2-202ENST00000532731 184 ntBASIC0.19□□□□□ -2.38
SLC6A1P30531 MIR4659A-201ENST00000580269 81 ntBASIC0.19□□□□□ -2.38
SLC6A1P30531 POLR3GP1-201ENST00000594073 261 ntBASIC0.19□□□□□ -2.38
SLC6A1P30531 MIR4791-201ENST00000607666 84 ntBASIC0.19□□□□□ -2.38
SLC6A1P30531 JPX_2.1-201ENST00000614161 69 ntBASIC0.19□□□□□ -2.38
SLC6A1P30531 AC002553.4-201ENST00000616896 331 ntBASIC0.19□□□□□ -2.38
SLC6A1P30531 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.18□□□□□ -2.38
SLC6A1P30531 RNU6-1209P-201ENST00000363655 107 ntBASIC0.18□□□□□ -2.38
SLC6A1P30531 Y_RNA.341-201ENST00000365341 102 ntBASIC0.18□□□□□ -2.38
SLC6A1P30531 RNU6-125P-201ENST00000384505 107 ntBASIC0.18□□□□□ -2.38
SLC6A1P30531 SNORA75.6-201ENST00000391318 127 ntBASIC0.18□□□□□ -2.38
SLC6A1P30531 RNU6-710P-201ENST00000410424 105 ntBASIC0.18□□□□□ -2.38
SLC6A1P30531 AF228730.4-201ENST00000421457 183 ntBASIC0.18□□□□□ -2.38
SLC6A1P30531 PRDX4P1-201ENST00000507189 574 ntBASIC0.18□□□□□ -2.38
SLC6A1P30531 RNU6-470P-201ENST00000515954 104 ntBASIC0.18□□□□□ -2.38
SLC6A1P30531 RNU6-977P-201ENST00000516411 103 ntBASIC0.18□□□□□ -2.38
SLC6A1P30531 AP003327.1-201ENST00000529684 127 ntBASIC0.18□□□□□ -2.38
SLC6A1P30531 MIR4771-2-201ENST00000577758 74 ntBASIC0.18□□□□□ -2.38
SLC6A1P30531 MIR4771-1-201ENST00000582617 74 ntBASIC0.18□□□□□ -2.38
SLC6A1P30531 AC008507.4-201ENST00000585464 127 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms