Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MIR4764-201ENST00000580680 88 ntBASIC0.78□□□□□ -2.28
XRCC1P18887 MIR2681-201ENST00000581814 105 ntBASIC0.78□□□□□ -2.28
XRCC1P18887 MIR4801-201ENST00000582704 82 ntBASIC0.78□□□□□ -2.28
XRCC1P18887 MIR4653-201ENST00000585107 83 ntBASIC0.78□□□□□ -2.28
XRCC1P18887 RMST_2.1-201ENST00000617263 136 ntBASIC0.78□□□□□ -2.28
XRCC1P18887 SNORD81.1-201ENST00000363064 77 ntBASIC0.77□□□□□ -2.29
XRCC1P18887 RNU6-21P-201ENST00000384710 107 ntBASIC0.77□□□□□ -2.29
XRCC1P18887 MIR942-201ENST00000401111 86 ntBASIC0.77□□□□□ -2.29
XRCC1P18887 snoU13.25-201ENST00000458945 104 ntBASIC0.77□□□□□ -2.29
XRCC1P18887 RNU7-115P-201ENST00000516433 55 ntBASIC0.77□□□□□ -2.29
XRCC1P18887 RNU6-1007P-201ENST00000516586 107 ntBASIC0.77□□□□□ -2.29
XRCC1P18887 RNU11-2P-201ENST00000516898 142 ntBASIC0.77□□□□□ -2.29
XRCC1P18887 SNORA18.7-201ENST00000516910 131 ntBASIC0.77□□□□□ -2.29
XRCC1P18887 AC127455.1-201ENST00000565496 145 ntBASIC0.77□□□□□ -2.29
XRCC1P18887 MIR548S-201ENST00000581352 82 ntBASIC0.77□□□□□ -2.29
XRCC1P18887 DEFB117-201ENST00000602356 141 ntBASIC0.77□□□□□ -2.29
XRCC1P18887 JPX_2.1-201ENST00000614161 69 ntBASIC0.77□□□□□ -2.29
XRCC1P18887 AC104985.2-201ENST00000620598 500 ntBASIC0.77□□□□□ -2.29
XRCC1P18887 AL442644.1-201ENST00000454390 3105 ntBASIC0.76□□□□□ -2.29
XRCC1P18887 MIR103A2-201ENST00000362154 78 ntBASIC0.76□□□□□ -2.29
XRCC1P18887 Y_RNA.242-201ENST00000364473 110 ntBASIC0.76□□□□□ -2.29
XRCC1P18887 Y_RNA.315-201ENST00000365117 102 ntBASIC0.76□□□□□ -2.29
XRCC1P18887 SNORD38C-201ENST00000384381 69 ntBASIC0.76□□□□□ -2.29
XRCC1P18887 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
XRCC1P18887 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.76□□□□□ -2.29
XRCC1P18887 SNORD123-201ENST00000459473 70 ntBASIC0.76□□□□□ -2.29
XRCC1P18887 snoU13.18-201ENST00000459483 104 ntBASIC0.76□□□□□ -2.29
XRCC1P18887 RPL23AP54-201ENST00000495129 419 ntBASIC0.76□□□□□ -2.29
XRCC1P18887 ACA64.5-201ENST00000516207 127 ntBASIC0.76□□□□□ -2.29
XRCC1P18887 AC024405.2-202ENST00000532731 184 ntBASIC0.76□□□□□ -2.29
XRCC1P18887 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.76□□□□□ -2.29
XRCC1P18887 SEPT14P17-201ENST00000617978 177 ntBASIC0.76□□□□□ -2.29
XRCC1P18887 MIR6734-201ENST00000621166 68 ntBASIC0.76□□□□□ -2.29
XRCC1P18887 Y_RNA.197-201ENST00000364004 102 ntBASIC0.75□□□□□ -2.29
XRCC1P18887 MT-TD-201ENST00000387419 68 ntBASIC0.75□□□□□ -2.29
XRCC1P18887 RNU2-64P-201ENST00000411315 191 ntBASIC0.75□□□□□ -2.29
XRCC1P18887 SEPT14P8-201ENST00000508026 178 ntBASIC0.75□□□□□ -2.29
XRCC1P18887 AL080274.1-201ENST00000605565 220 ntBASIC0.75□□□□□ -2.29
XRCC1P18887 SNORD58B-201ENST00000607313 66 ntBASIC0.75□□□□□ -2.29
XRCC1P18887 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.75□□□□□ -2.29
XRCC1P18887 AC022709.1-201ENST00000615967 87 ntBASIC0.75□□□□□ -2.29
XRCC1P18887 MIR548AY-201ENST00000617669 107 ntBASIC0.75□□□□□ -2.29
XRCC1P18887 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
XRCC1P18887 HSBP1P2-201ENST00000299671 229 ntBASIC0.74□□□□□ -2.29
XRCC1P18887 U8.7-201ENST00000364940 136 ntBASIC0.74□□□□□ -2.29
XRCC1P18887 RNY3-201ENST00000365484 102 ntBASIC0.74□□□□□ -2.29
XRCC1P18887 Y_RNA.370-201ENST00000365589 108 ntBASIC0.74□□□□□ -2.29
XRCC1P18887 RNU6-442P-201ENST00000383968 104 ntBASIC0.74□□□□□ -2.29
XRCC1P18887 Y_RNA.471-201ENST00000384312 102 ntBASIC0.74□□□□□ -2.29
XRCC1P18887 AL590004.1-201ENST00000405321 300 ntBASIC0.74□□□□□ -2.29
XRCC1P18887 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.74□□□□□ -2.29
XRCC1P18887 AC117454.1-201ENST00000491120 168 ntBASIC0.74□□□□□ -2.29
XRCC1P18887 MTND3P22-201ENST00000510932 243 ntBASIC0.74□□□□□ -2.29
XRCC1P18887 RNU7-41P-201ENST00000515917 61 ntBASIC0.74□□□□□ -2.29
XRCC1P18887 RNU6-830P-201ENST00000516353 107 ntBASIC0.74□□□□□ -2.29
XRCC1P18887 RNA5SP255-201ENST00000516370 107 ntBASIC0.74□□□□□ -2.29
XRCC1P18887 AC093027.1-201ENST00000546698 429 ntBASIC0.74□□□□□ -2.29
XRCC1P18887 SNORD113-5-201ENST00000607261 78 ntBASIC0.74□□□□□ -2.29
XRCC1P18887 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.74□□□□□ -2.29
XRCC1P18887 Y_RNA.112-201ENST00000363250 102 ntBASIC0.73□□□□□ -2.29
XRCC1P18887 RNU6-674P-201ENST00000363831 107 ntBASIC0.73□□□□□ -2.29
XRCC1P18887 Y_RNA.354-201ENST00000365448 111 ntBASIC0.73□□□□□ -2.29
XRCC1P18887 RNU6-937P-201ENST00000384325 106 ntBASIC0.73□□□□□ -2.29
XRCC1P18887 RNU6-1067P-201ENST00000384752 107 ntBASIC0.73□□□□□ -2.29
XRCC1P18887 MIR608-201ENST00000384820 100 ntBASIC0.73□□□□□ -2.29
XRCC1P18887 MIR802-201ENST00000390235 94 ntBASIC0.73□□□□□ -2.29
XRCC1P18887 MIR1302-11-201ENST00000408051 138 ntBASIC0.73□□□□□ -2.29
XRCC1P18887 MIR1302-9-201ENST00000408365 138 ntBASIC0.73□□□□□ -2.29
XRCC1P18887 MIR1302-10-201ENST00000408734 138 ntBASIC0.73□□□□□ -2.29
XRCC1P18887 RPS3AP1-201ENST00000413190 320 ntBASIC0.73□□□□□ -2.29
XRCC1P18887 AC136628.3-201ENST00000521868 290 ntBASIC0.73□□□□□ -2.29
XRCC1P18887 AC040926.1-201ENST00000530195 238 ntBASIC0.73□□□□□ -2.29
XRCC1P18887 MIR5000-201ENST00000577717 103 ntBASIC0.73□□□□□ -2.29
XRCC1P18887 MIR1302-2-201ENST00000607096 138 ntBASIC0.73□□□□□ -2.29
XRCC1P18887 AC006157.1-201ENST00000611750 366 ntBASIC0.73□□□□□ -2.29
XRCC1P18887 MIR6835-201ENST00000621552 64 ntBASIC0.73□□□□□ -2.29
XRCC1P18887 AC112487.2-201ENST00000637950 304 ntBASIC0.73□□□□□ -2.29
XRCC1P18887 Y_RNA.143-201ENST00000363520 106 ntBASIC0.72□□□□□ -2.29
XRCC1P18887 RNU6-1209P-201ENST00000363655 107 ntBASIC0.72□□□□□ -2.29
XRCC1P18887 Y_RNA.330-201ENST00000365230 109 ntBASIC0.72□□□□□ -2.29
XRCC1P18887 MIR1185-1-201ENST00000408598 86 ntBASIC0.72□□□□□ -2.29
XRCC1P18887 AC006461.1-201ENST00000412637 326 ntBASIC0.72□□□□□ -2.29
XRCC1P18887 MTND1P14-201ENST00000427400 950 ntBASIC0.72□□□□□ -2.29
XRCC1P18887 POLR2KP2-201ENST00000438155 177 ntBASIC0.72□□□□□ -2.29
XRCC1P18887 RNU6-1170P-201ENST00000515974 106 ntBASIC0.72□□□□□ -2.29
XRCC1P18887 RNU6-507P-201ENST00000516045 100 ntBASIC0.72□□□□□ -2.29
XRCC1P18887 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
XRCC1P18887 AC106800.4-201ENST00000614905 153 ntBASIC0.72□□□□□ -2.29
XRCC1P18887 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.72□□□□□ -2.29
XRCC1P18887 Y_RNA.58-201ENST00000362807 102 ntBASIC0.71□□□□□ -2.3
XRCC1P18887 Y_RNA.154-201ENST00000363624 102 ntBASIC0.71□□□□□ -2.3
XRCC1P18887 RNY3P1-201ENST00000365085 102 ntBASIC0.71□□□□□ -2.3
XRCC1P18887 SNORA63.7-201ENST00000365579 123 ntBASIC0.71□□□□□ -2.3
XRCC1P18887 Y_RNA.383-201ENST00000383855 97 ntBASIC0.71□□□□□ -2.3
XRCC1P18887 Y_RNA.431-201ENST00000384086 102 ntBASIC0.71□□□□□ -2.3
XRCC1P18887 MIR100-201ENST00000385259 80 ntBASIC0.71□□□□□ -2.3
XRCC1P18887 Y_RNA.579-201ENST00000390939 94 ntBASIC0.71□□□□□ -2.3
XRCC1P18887 RNU4-30P-201ENST00000410245 143 ntBASIC0.71□□□□□ -2.3
XRCC1P18887 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.71□□□□□ -2.3
XRCC1P18887 AL606490.4-201ENST00000423117 127 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 195.8 ms