Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.6□□□□□ -2.15
PCNAP12004 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.6□□□□□ -2.15
PCNAP12004 MIR4282-201ENST00000583613 67 ntBASIC1.6□□□□□ -2.15
PCNAP12004 AC120024.3-201ENST00000603167 156 ntBASIC1.6□□□□□ -2.15
PCNAP12004 MIR502-201ENST00000606349 86 ntBASIC1.6□□□□□ -2.15
PCNAP12004 JPX_2.1-201ENST00000614161 69 ntBASIC1.6□□□□□ -2.15
PCNAP12004 AL513423.1-201ENST00000621695 132 ntBASIC1.6□□□□□ -2.15
PCNAP12004 MIR367-201ENST00000362299 68 ntBASIC1.59□□□□□ -2.15
PCNAP12004 Y_RNA.24-201ENST00000362508 103 ntBASIC1.59□□□□□ -2.15
PCNAP12004 RNU6-674P-201ENST00000363831 107 ntBASIC1.59□□□□□ -2.15
PCNAP12004 SNORD50B-201ENST00000364995 70 ntBASIC1.59□□□□□ -2.15
PCNAP12004 RNU6-338P-201ENST00000383888 105 ntBASIC1.59□□□□□ -2.15
PCNAP12004 RNU6-163P-201ENST00000384396 106 ntBASIC1.59□□□□□ -2.15
PCNAP12004 MIR504-201ENST00000385065 83 ntBASIC1.59□□□□□ -2.15
PCNAP12004 AL627390.1-201ENST00000396055 340 ntBASIC1.59□□□□□ -2.15
PCNAP12004 MIR1289-2-201ENST00000408360 111 ntBASIC1.59□□□□□ -2.15
PCNAP12004 snoU13.15-201ENST00000459407 104 ntBASIC1.59□□□□□ -2.15
PCNAP12004 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.59□□□□□ -2.15
PCNAP12004 SNORA25.15-201ENST00000516487 89 ntBASIC1.59□□□□□ -2.15
PCNAP12004 RNU6-111P-201ENST00000517179 105 ntBASIC1.59□□□□□ -2.15
PCNAP12004 AC019176.1-201ENST00000518519 225 ntBASIC1.59□□□□□ -2.15
PCNAP12004 AC015688.6-201ENST00000577737 104 ntBASIC1.59□□□□□ -2.15
PCNAP12004 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.58□□□□□ -2.16
PCNAP12004 RNU6-1123P-201ENST00000362347 106 ntBASIC1.58□□□□□ -2.16
PCNAP12004 Y_RNA.20-201ENST00000362479 113 ntBASIC1.58□□□□□ -2.16
PCNAP12004 RNU6-457P-201ENST00000363999 107 ntBASIC1.58□□□□□ -2.16
PCNAP12004 U8.5-201ENST00000364528 136 ntBASIC1.58□□□□□ -2.16
PCNAP12004 Y_RNA.292-201ENST00000364904 97 ntBASIC1.58□□□□□ -2.16
PCNAP12004 RNU6-969P-201ENST00000383900 105 ntBASIC1.58□□□□□ -2.16
PCNAP12004 RNU6-144P-201ENST00000383951 107 ntBASIC1.58□□□□□ -2.16
PCNAP12004 RNU6-131P-201ENST00000391144 107 ntBASIC1.58□□□□□ -2.16
PCNAP12004 MIR1261-201ENST00000408659 82 ntBASIC1.58□□□□□ -2.16
PCNAP12004 RNU1-98P-201ENST00000458992 160 ntBASIC1.58□□□□□ -2.16
PCNAP12004 Y_RNA.638-201ENST00000459374 113 ntBASIC1.58□□□□□ -2.16
PCNAP12004 snoU13.26-201ENST00000459452 105 ntBASIC1.58□□□□□ -2.16
PCNAP12004 RNY3P16-201ENST00000516338 101 ntBASIC1.58□□□□□ -2.16
PCNAP12004 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.58□□□□□ -2.16
PCNAP12004 AC100767.1-201ENST00000528178 123 ntBASIC1.58□□□□□ -2.16
PCNAP12004 MIR4724-201ENST00000579485 89 ntBASIC1.58□□□□□ -2.16
PCNAP12004 MIR4762-201ENST00000585261 75 ntBASIC1.58□□□□□ -2.16
PCNAP12004 AC006006.1-201ENST00000603082 144 ntBASIC1.58□□□□□ -2.16
PCNAP12004 AC011921.3-201ENST00000605540 361 ntBASIC1.58□□□□□ -2.16
PCNAP12004 BX284668.6-201ENST00000606899 438 ntBASIC1.58□□□□□ -2.16
PCNAP12004 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.58□□□□□ -2.16
PCNAP12004 MIR302D-201ENST00000362275 68 ntBASIC1.57□□□□□ -2.16
PCNAP12004 RNU6-1084P-201ENST00000362498 107 ntBASIC1.57□□□□□ -2.16
PCNAP12004 SNORA20.1-201ENST00000364790 130 ntBASIC1.57□□□□□ -2.16
PCNAP12004 RN7SKP101-201ENST00000411376 320 ntBASIC1.57□□□□□ -2.16
PCNAP12004 SNORD11-201ENST00000459124 84 ntBASIC1.57□□□□□ -2.16
PCNAP12004 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.57□□□□□ -2.16
PCNAP12004 RNU6-1023P-201ENST00000516137 106 ntBASIC1.57□□□□□ -2.16
PCNAP12004 AL365434.2-201ENST00000607979 234 ntBASIC1.57□□□□□ -2.16
PCNAP12004 AL442067.1-201ENST00000613261 223 ntBASIC1.57□□□□□ -2.16
PCNAP12004 Y_RNA.802-201ENST00000614892 130 ntBASIC1.57□□□□□ -2.16
PCNAP12004 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
PCNAP12004 AL365265.1-201ENST00000621045 234 ntBASIC1.57□□□□□ -2.16
PCNAP12004 AL161722.3-201ENST00000605789 2983 ntBASIC1.56□□□□□ -2.16
PCNAP12004 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
PCNAP12004 AC092991.1-201ENST00000477176 376 ntBASIC1.56□□□□□ -2.16
PCNAP12004 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.56□□□□□ -2.16
PCNAP12004 CYCTP-201ENST00000504253 315 ntBASIC1.56□□□□□ -2.16
PCNAP12004 SNORD45.4-201ENST00000516629 73 ntBASIC1.56□□□□□ -2.16
PCNAP12004 RNU6-1271P-201ENST00000517049 105 ntBASIC1.56□□□□□ -2.16
PCNAP12004 AL049861.1-201ENST00000603130 150 ntBASIC1.56□□□□□ -2.16
PCNAP12004 Y_RNA.188-201ENST00000363952 111 ntBASIC1.55□□□□□ -2.16
PCNAP12004 SNORD1A-201ENST00000364968 72 ntBASIC1.55□□□□□ -2.16
PCNAP12004 Y_RNA.304-201ENST00000365011 112 ntBASIC1.55□□□□□ -2.16
PCNAP12004 SNORA8.3-201ENST00000384679 139 ntBASIC1.55□□□□□ -2.16
PCNAP12004 SNORD72-201ENST00000390994 80 ntBASIC1.55□□□□□ -2.16
PCNAP12004 RPS29P23-201ENST00000458635 123 ntBASIC1.55□□□□□ -2.16
PCNAP12004 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.55□□□□□ -2.16
PCNAP12004 MIR4255-201ENST00000579351 72 ntBASIC1.55□□□□□ -2.16
PCNAP12004 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.55□□□□□ -2.16
PCNAP12004 RNU6-653P-201ENST00000363074 106 ntBASIC1.54□□□□□ -2.16
PCNAP12004 snoU2_19.4-201ENST00000364329 80 ntBASIC1.54□□□□□ -2.16
PCNAP12004 Y_RNA.401-201ENST00000383965 117 ntBASIC1.54□□□□□ -2.16
PCNAP12004 MIR526A1-201ENST00000384897 85 ntBASIC1.54□□□□□ -2.16
PCNAP12004 MIR626-201ENST00000385032 94 ntBASIC1.54□□□□□ -2.16
PCNAP12004 MIR526A2-201ENST00000390198 65 ntBASIC1.54□□□□□ -2.16
PCNAP12004 SNORA26.9-201ENST00000391322 122 ntBASIC1.54□□□□□ -2.16
PCNAP12004 MIR891A-201ENST00000401237 79 ntBASIC1.54□□□□□ -2.16
PCNAP12004 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.54□□□□□ -2.16
PCNAP12004 AC245047.8-201ENST00000456455 284 ntBASIC1.54□□□□□ -2.16
PCNAP12004 RNU6-453P-201ENST00000516819 85 ntBASIC1.54□□□□□ -2.16
PCNAP12004 MIR2681-201ENST00000581814 105 ntBASIC1.54□□□□□ -2.16
PCNAP12004 AL021707.8-201ENST00000609428 183 ntBASIC1.54□□□□□ -2.16
PCNAP12004 Y_RNA.229-201ENST00000364347 113 ntBASIC1.53□□□□□ -2.16
PCNAP12004 snoU2-30.1-201ENST00000365012 70 ntBASIC1.53□□□□□ -2.16
PCNAP12004 Y_RNA.478-201ENST00000384358 107 ntBASIC1.53□□□□□ -2.16
PCNAP12004 MIR516B2-201ENST00000385190 85 ntBASIC1.53□□□□□ -2.16
PCNAP12004 MT-TT-201ENST00000387460 66 ntBASIC1.53□□□□□ -2.16
PCNAP12004 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.53□□□□□ -2.16
PCNAP12004 SNORD58.1-201ENST00000391313 66 ntBASIC1.53□□□□□ -2.16
PCNAP12004 RPL30P13-201ENST00000418873 348 ntBASIC1.53□□□□□ -2.16
PCNAP12004 CYCSP49-201ENST00000420810 319 ntBASIC1.53□□□□□ -2.16
PCNAP12004 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.53□□□□□ -2.16
PCNAP12004 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.53□□□□□ -2.16
PCNAP12004 SCARNA8-201ENST00000515924 131 ntBASIC1.53□□□□□ -2.16
PCNAP12004 RNU6-917P-201ENST00000516294 104 ntBASIC1.53□□□□□ -2.16
PCNAP12004 MIR4422-201ENST00000581938 83 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms