Protein–RNA interactions for Protein: P09012

SNRPA, U1 small nuclear ribonucleoprotein A, humanhuman

Known RBP Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPAP09012 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.2□□□□□ -2.38
SNRPAP09012 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.2□□□□□ -2.38
SNRPAP09012 FCF1P4-201ENST00000448326 183 ntBASIC0.2□□□□□ -2.38
SNRPAP09012 MTND4P17-201ENST00000470444 350 ntBASIC0.2□□□□□ -2.38
SNRPAP09012 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
SNRPAP09012 AC015726.2-201ENST00000620112 122 ntBASIC0.2□□□□□ -2.38
SNRPAP09012 AC091925.1-201ENST00000623204 462 ntBASIC0.2□□□□□ -2.38
SNRPAP09012 AC090625.1-201ENST00000357130 210 ntBASIC0.19□□□□□ -2.38
SNRPAP09012 Y_RNA.3-201ENST00000362331 103 ntBASIC0.19□□□□□ -2.38
SNRPAP09012 RNU6-626P-201ENST00000363354 107 ntBASIC0.19□□□□□ -2.38
SNRPAP09012 Y_RNA.146-201ENST00000363549 102 ntBASIC0.19□□□□□ -2.38
SNRPAP09012 Y_RNA.329-201ENST00000365209 107 ntBASIC0.19□□□□□ -2.38
SNRPAP09012 Y_RNA.482-201ENST00000384377 111 ntBASIC0.19□□□□□ -2.38
SNRPAP09012 Y_RNA.516-201ENST00000384541 124 ntBASIC0.19□□□□□ -2.38
SNRPAP09012 RNU6-192P-201ENST00000391253 100 ntBASIC0.19□□□□□ -2.38
SNRPAP09012 U8.17-201ENST00000391292 132 ntBASIC0.19□□□□□ -2.38
SNRPAP09012 AL590004.1-201ENST00000405321 300 ntBASIC0.19□□□□□ -2.38
SNRPAP09012 MTND3P8-201ENST00000412909 339 ntBASIC0.19□□□□□ -2.38
SNRPAP09012 AC005730.3-201ENST00000583067 366 ntBASIC0.19□□□□□ -2.38
SNRPAP09012 MTND1P7-201ENST00000632801 297 ntBASIC0.19□□□□□ -2.38
SNRPAP09012 AL669831.3-213ENST00000636676 183 ntBASIC0.19□□□□□ -2.38
SNRPAP09012 RNU6-934P-201ENST00000365154 107 ntBASIC0.18□□□□□ -2.38
SNRPAP09012 RNU6-125P-201ENST00000384505 107 ntBASIC0.18□□□□□ -2.38
SNRPAP09012 MIR802-201ENST00000390235 94 ntBASIC0.18□□□□□ -2.38
SNRPAP09012 RNU6-679P-201ENST00000391003 106 ntBASIC0.18□□□□□ -2.38
SNRPAP09012 MTCO2P33-201ENST00000402100 465 ntBASIC0.18□□□□□ -2.38
SNRPAP09012 RNU4-14P-201ENST00000410858 122 ntBASIC0.18□□□□□ -2.38
SNRPAP09012 RNU6-470P-201ENST00000515954 104 ntBASIC0.18□□□□□ -2.38
SNRPAP09012 RNU6-718P-201ENST00000516166 105 ntBASIC0.18□□□□□ -2.38
SNRPAP09012 Y_RNA.714-201ENST00000517065 90 ntBASIC0.18□□□□□ -2.38
SNRPAP09012 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.18□□□□□ -2.38
SNRPAP09012 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.18□□□□□ -2.38
SNRPAP09012 MIR1273G-201ENST00000577677 100 ntBASIC0.18□□□□□ -2.38
SNRPAP09012 AC005899.2-201ENST00000584353 90 ntBASIC0.18□□□□□ -2.38
SNRPAP09012 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.18□□□□□ -2.38
SNRPAP09012 Pinc.1-201ENST00000616452 154 ntBASIC0.18□□□□□ -2.38
SNRPAP09012 AC092634.7-201ENST00000621022 103 ntBASIC0.18□□□□□ -2.38
SNRPAP09012 RNU6-442P-201ENST00000383968 104 ntBASIC0.17□□□□□ -2.38
SNRPAP09012 Y_RNA.466-201ENST00000384294 113 ntBASIC0.17□□□□□ -2.38
SNRPAP09012 MIR625-201ENST00000385047 85 ntBASIC0.17□□□□□ -2.38
SNRPAP09012 RNU6-510P-201ENST00000391239 108 ntBASIC0.17□□□□□ -2.38
SNRPAP09012 MIR1278-201ENST00000408753 81 ntBASIC0.17□□□□□ -2.38
SNRPAP09012 RNU6-1156P-201ENST00000410365 100 ntBASIC0.17□□□□□ -2.38
SNRPAP09012 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.17□□□□□ -2.38
SNRPAP09012 SNRPGP14-201ENST00000435400 219 ntBASIC0.17□□□□□ -2.38
SNRPAP09012 MIR2355-201ENST00000517199 87 ntBASIC0.17□□□□□ -2.38
SNRPAP09012 POLR3GP1-201ENST00000594073 261 ntBASIC0.17□□□□□ -2.38
SNRPAP09012 LARP7P1-201ENST00000605576 316 ntBASIC0.17□□□□□ -2.38
SNRPAP09012 MIR4791-201ENST00000607666 84 ntBASIC0.17□□□□□ -2.38
SNRPAP09012 JPX_2.1-201ENST00000614161 69 ntBASIC0.17□□□□□ -2.38
SNRPAP09012 MIR924-201ENST00000638017 53 ntBASIC0.17□□□□□ -2.38
SNRPAP09012 RNU6-349P-201ENST00000362402 107 ntBASIC0.16□□□□□ -2.38
SNRPAP09012 Y_RNA.203-201ENST00000364106 102 ntBASIC0.16□□□□□ -2.38
SNRPAP09012 RNU6-268P-201ENST00000364174 107 ntBASIC0.16□□□□□ -2.38
SNRPAP09012 RNU6-708P-201ENST00000384217 107 ntBASIC0.16□□□□□ -2.38
SNRPAP09012 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
SNRPAP09012 AC090844.1-201ENST00000422019 156 ntBASIC0.16□□□□□ -2.38
SNRPAP09012 RPL23AP54-201ENST00000495129 419 ntBASIC0.16□□□□□ -2.38
SNRPAP09012 AC116353.2-201ENST00000505332 712 ntBASIC0.16□□□□□ -2.38
SNRPAP09012 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.16□□□□□ -2.38
SNRPAP09012 AC024405.2-202ENST00000532731 184 ntBASIC0.16□□□□□ -2.38
SNRPAP09012 MIR4514-201ENST00000581410 57 ntBASIC0.16□□□□□ -2.38
SNRPAP09012 AC020891.4-201ENST00000605745 93 ntBASIC0.16□□□□□ -2.38
SNRPAP09012 SNORA25.18-201ENST00000607153 114 ntBASIC0.16□□□□□ -2.38
SNRPAP09012 uc_338.6-201ENST00000613544 171 ntBASIC0.16□□□□□ -2.38
SNRPAP09012 RNU6-1209P-201ENST00000363655 107 ntBASIC0.15□□□□□ -2.39
SNRPAP09012 Y_RNA.205-201ENST00000364128 113 ntBASIC0.15□□□□□ -2.39
SNRPAP09012 RNA5SP517-201ENST00000364724 117 ntBASIC0.15□□□□□ -2.39
SNRPAP09012 Y_RNA.341-201ENST00000365341 102 ntBASIC0.15□□□□□ -2.39
SNRPAP09012 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
SNRPAP09012 SNORD72-201ENST00000390994 80 ntBASIC0.15□□□□□ -2.39
SNRPAP09012 SNORD78.2-201ENST00000391076 69 ntBASIC0.15□□□□□ -2.39
SNRPAP09012 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.15□□□□□ -2.39
SNRPAP09012 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.15□□□□□ -2.39
SNRPAP09012 SNRPGP12-201ENST00000449481 213 ntBASIC0.15□□□□□ -2.39
SNRPAP09012 AC069439.1-201ENST00000494739 167 ntBASIC0.15□□□□□ -2.39
SNRPAP09012 AC108740.1-201ENST00000498629 225 ntBASIC0.15□□□□□ -2.39
SNRPAP09012 SNORA25.12-201ENST00000516202 82 ntBASIC0.15□□□□□ -2.39
SNRPAP09012 RNU6-307P-201ENST00000516743 106 ntBASIC0.15□□□□□ -2.39
SNRPAP09012 MIR4659A-201ENST00000580269 81 ntBASIC0.15□□□□□ -2.39
SNRPAP09012 MIR4804-201ENST00000581683 73 ntBASIC0.15□□□□□ -2.39
SNRPAP09012 MIR4676-201ENST00000583078 72 ntBASIC0.15□□□□□ -2.39
SNRPAP09012 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.15□□□□□ -2.39
SNRPAP09012 AC090517.2-201ENST00000614966 680 ntBASIC0.15□□□□□ -2.39
SNRPAP09012 Y_RNA.310-201ENST00000365063 113 ntBASIC0.14□□□□□ -2.39
SNRPAP09012 Y_RNA.370-201ENST00000365589 108 ntBASIC0.14□□□□□ -2.39
SNRPAP09012 Y_RNA.376-201ENST00000365638 108 ntBASIC0.14□□□□□ -2.39
SNRPAP09012 RNU6-1323P-201ENST00000384025 107 ntBASIC0.14□□□□□ -2.39
SNRPAP09012 RNY3P4-201ENST00000384428 101 ntBASIC0.14□□□□□ -2.39
SNRPAP09012 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.14□□□□□ -2.39
SNRPAP09012 MCFD2P1-201ENST00000417812 300 ntBASIC0.14□□□□□ -2.39
SNRPAP09012 BTF3P11-201ENST00000426582 477 ntBASIC0.14□□□□□ -2.39
SNRPAP09012 AC096644.2-201ENST00000429278 159 ntBASIC0.14□□□□□ -2.39
SNRPAP09012 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.14□□□□□ -2.39
SNRPAP09012 RNU6-720P-201ENST00000516363 108 ntBASIC0.14□□□□□ -2.39
SNRPAP09012 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.14□□□□□ -2.39
SNRPAP09012 EIF1P4-201ENST00000572664 335 ntBASIC0.14□□□□□ -2.39
SNRPAP09012 DEFB117-201ENST00000602356 141 ntBASIC0.14□□□□□ -2.39
SNRPAP09012 AP000753.3-201ENST00000604083 169 ntBASIC0.14□□□□□ -2.39
SNRPAP09012 MIR6779-201ENST00000617283 64 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms