Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 Y_RNA.54-201ENST00000362766 105 ntBASIC1.37□□□□□ -2.19
VTNP04004 Y_RNA.133-201ENST00000363428 110 ntBASIC1.37□□□□□ -2.19
VTNP04004 MIR568-201ENST00000385036 95 ntBASIC1.37□□□□□ -2.19
VTNP04004 MIR758-201ENST00000390227 88 ntBASIC1.37□□□□□ -2.19
VTNP04004 SNORA36B-201ENST00000410438 131 ntBASIC1.37□□□□□ -2.19
VTNP04004 Z98949.2-201ENST00000440996 144 ntBASIC1.37□□□□□ -2.19
VTNP04004 PGBD4P5-201ENST00000445958 426 ntBASIC1.37□□□□□ -2.19
VTNP04004 AC099513.1-201ENST00000490423 301 ntBASIC1.37□□□□□ -2.19
VTNP04004 MTCO2P24-201ENST00000515611 426 ntBASIC1.37□□□□□ -2.19
VTNP04004 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.37□□□□□ -2.19
VTNP04004 RNU7-12P-201ENST00000516030 62 ntBASIC1.37□□□□□ -2.19
VTNP04004 SNORA27.4-201ENST00000516650 95 ntBASIC1.37□□□□□ -2.19
VTNP04004 RNU7-28P-201ENST00000516759 62 ntBASIC1.37□□□□□ -2.19
VTNP04004 RNA5SP102-201ENST00000516865 106 ntBASIC1.37□□□□□ -2.19
VTNP04004 RNU6-1116P-201ENST00000517269 99 ntBASIC1.37□□□□□ -2.19
VTNP04004 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.37□□□□□ -2.19
VTNP04004 AC015688.6-201ENST00000577737 104 ntBASIC1.37□□□□□ -2.19
VTNP04004 AP003357.1-201ENST00000604497 148 ntBASIC1.37□□□□□ -2.19
VTNP04004 AL591926.4-201ENST00000616895 298 ntBASIC1.37□□□□□ -2.19
VTNP04004 AC106754.2-201ENST00000623006 233 ntBASIC1.37□□□□□ -2.19
VTNP04004 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.36□□□□□ -2.19
VTNP04004 Y_RNA.293-201ENST00000364908 93 ntBASIC1.36□□□□□ -2.19
VTNP04004 SNORA12.1-201ENST00000390873 148 ntBASIC1.36□□□□□ -2.19
VTNP04004 U8.16-201ENST00000391279 133 ntBASIC1.36□□□□□ -2.19
VTNP04004 MIR1278-201ENST00000408753 81 ntBASIC1.36□□□□□ -2.19
VTNP04004 MTCYBP9-201ENST00000431021 303 ntBASIC1.36□□□□□ -2.19
VTNP04004 MTND3P2-201ENST00000438452 342 ntBASIC1.36□□□□□ -2.19
VTNP04004 AC245517.4-201ENST00000448601 281 ntBASIC1.36□□□□□ -2.19
VTNP04004 AC093850.1-201ENST00000454121 251 ntBASIC1.36□□□□□ -2.19
VTNP04004 OR9P1P-201ENST00000496431 281 ntBASIC1.36□□□□□ -2.19
VTNP04004 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.36□□□□□ -2.19
VTNP04004 AL358944.1-201ENST00000528537 144 ntBASIC1.36□□□□□ -2.19
VTNP04004 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.36□□□□□ -2.19
VTNP04004 snoU18.1-201ENST00000629629 71 ntBASIC1.36□□□□□ -2.19
VTNP04004 RNU6-1084P-201ENST00000362498 107 ntBASIC1.35□□□□□ -2.19
VTNP04004 SNORD33-201ENST00000362761 85 ntBASIC1.35□□□□□ -2.19
VTNP04004 Y_RNA.117-201ENST00000363294 101 ntBASIC1.35□□□□□ -2.19
VTNP04004 RNU6-1205P-201ENST00000363625 106 ntBASIC1.35□□□□□ -2.19
VTNP04004 RNU6-899P-201ENST00000363947 107 ntBASIC1.35□□□□□ -2.19
VTNP04004 Y_RNA.203-201ENST00000364106 102 ntBASIC1.35□□□□□ -2.19
VTNP04004 Y_RNA.253-201ENST00000364562 112 ntBASIC1.35□□□□□ -2.19
VTNP04004 SNORD1A-201ENST00000364968 72 ntBASIC1.35□□□□□ -2.19
VTNP04004 RNU6-163P-201ENST00000384396 106 ntBASIC1.35□□□□□ -2.19
VTNP04004 RNU6-1289P-201ENST00000384431 106 ntBASIC1.35□□□□□ -2.19
VTNP04004 MIR513A1-201ENST00000385138 129 ntBASIC1.35□□□□□ -2.19
VTNP04004 PIGPP3-201ENST00000425307 415 ntBASIC1.35□□□□□ -2.19
VTNP04004 Y_RNA.637-201ENST00000459424 114 ntBASIC1.35□□□□□ -2.19
VTNP04004 RNA5SP445-201ENST00000515889 115 ntBASIC1.35□□□□□ -2.19
VTNP04004 RNU6-970P-201ENST00000516312 107 ntBASIC1.35□□□□□ -2.19
VTNP04004 AC019176.1-201ENST00000518519 225 ntBASIC1.35□□□□□ -2.19
VTNP04004 AC127455.1-201ENST00000565496 145 ntBASIC1.35□□□□□ -2.19
VTNP04004 Y_RNA.44-201ENST00000362676 108 ntBASIC1.34□□□□□ -2.19
VTNP04004 RNU6-1272P-201ENST00000362776 107 ntBASIC1.34□□□□□ -2.19
VTNP04004 Y_RNA.288-201ENST00000364854 92 ntBASIC1.34□□□□□ -2.19
VTNP04004 RNU6-574P-201ENST00000384265 107 ntBASIC1.34□□□□□ -2.19
VTNP04004 RNU6-472P-201ENST00000384299 107 ntBASIC1.34□□□□□ -2.19
VTNP04004 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.34□□□□□ -2.19
VTNP04004 SNRPGP10-201ENST00000432323 225 ntBASIC1.34□□□□□ -2.19
VTNP04004 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.34□□□□□ -2.19
VTNP04004 RNU6-1123P-201ENST00000362347 106 ntBASIC1.33□□□□□ -2.2
VTNP04004 RNU6-740P-201ENST00000364734 105 ntBASIC1.33□□□□□ -2.2
VTNP04004 RNU6-196P-201ENST00000384315 107 ntBASIC1.33□□□□□ -2.2
VTNP04004 RNU6-424P-201ENST00000384367 105 ntBASIC1.33□□□□□ -2.2
VTNP04004 RNU2-38P-201ENST00000410856 79 ntBASIC1.33□□□□□ -2.2
VTNP04004 RPS27P16-201ENST00000425758 201 ntBASIC1.33□□□□□ -2.2
VTNP04004 RNU6-437P-201ENST00000459408 95 ntBASIC1.33□□□□□ -2.2
VTNP04004 COX6CP14-201ENST00000469580 174 ntBASIC1.33□□□□□ -2.2
VTNP04004 AC079140.2-201ENST00000506193 142 ntBASIC1.33□□□□□ -2.2
VTNP04004 Y_RNA.679-201ENST00000516416 91 ntBASIC1.33□□□□□ -2.2
VTNP04004 RNU6-902P-201ENST00000517212 91 ntBASIC1.33□□□□□ -2.2
VTNP04004 MIR5692C2-201ENST00000577959 77 ntBASIC1.33□□□□□ -2.2
VTNP04004 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.33□□□□□ -2.2
VTNP04004 AC005357.1-201ENST00000588399 301 ntBASIC1.33□□□□□ -2.2
VTNP04004 AC012433.1-201ENST00000588916 398 ntBASIC1.33□□□□□ -2.2
VTNP04004 JPX_2.1-201ENST00000614161 69 ntBASIC1.33□□□□□ -2.2
VTNP04004 MIR7974-201ENST00000615835 79 ntBASIC1.33□□□□□ -2.2
VTNP04004 AC013791.1-201ENST00000616619 62 ntBASIC1.33□□□□□ -2.2
VTNP04004 AL513423.1-201ENST00000621695 132 ntBASIC1.33□□□□□ -2.2
VTNP04004 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
VTNP04004 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
VTNP04004 MIR96-201ENST00000362288 78 ntBASIC1.32□□□□□ -2.2
VTNP04004 RNU6-1209P-201ENST00000363655 107 ntBASIC1.32□□□□□ -2.2
VTNP04004 MIR660-201ENST00000385235 97 ntBASIC1.32□□□□□ -2.2
VTNP04004 RNU6-131P-201ENST00000391144 107 ntBASIC1.32□□□□□ -2.2
VTNP04004 RNU6-383P-201ENST00000410864 94 ntBASIC1.32□□□□□ -2.2
VTNP04004 RNU6-651P-201ENST00000411040 105 ntBASIC1.32□□□□□ -2.2
VTNP04004 AC027119.1-201ENST00000440877 241 ntBASIC1.32□□□□□ -2.2
VTNP04004 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.32□□□□□ -2.2
VTNP04004 AC114811.1-201ENST00000507207 168 ntBASIC1.32□□□□□ -2.2
VTNP04004 RPL23AP91-201ENST00000569211 455 ntBASIC1.32□□□□□ -2.2
VTNP04004 MIR3937-201ENST00000580135 106 ntBASIC1.32□□□□□ -2.2
VTNP04004 AL162730.1-201ENST00000605734 292 ntBASIC1.32□□□□□ -2.2
VTNP04004 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.31□□□□□ -2.2
VTNP04004 Y_RNA.217-201ENST00000364214 105 ntBASIC1.31□□□□□ -2.2
VTNP04004 RNU4-10P-201ENST00000364383 140 ntBASIC1.31□□□□□ -2.2
VTNP04004 Y_RNA.275-201ENST00000364726 110 ntBASIC1.31□□□□□ -2.2
VTNP04004 Y_RNA.277-201ENST00000364754 102 ntBASIC1.31□□□□□ -2.2
VTNP04004 RNU6-211P-201ENST00000384047 107 ntBASIC1.31□□□□□ -2.2
VTNP04004 Y_RNA.477-201ENST00000384352 108 ntBASIC1.31□□□□□ -2.2
VTNP04004 MIR522-201ENST00000385071 87 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms