Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.01□□□□□ -2.09
CTNND1O60716 RNA5SP168-201ENST00000516642 112 ntBASIC2.01□□□□□ -2.09
CTNND1O60716 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
CTNND1O60716 MIR424-201ENST00000362227 98 ntBASIC2□□□□□ -2.09
CTNND1O60716 RNU6-1123P-201ENST00000362347 106 ntBASIC2□□□□□ -2.09
CTNND1O60716 RNU6-321P-201ENST00000410912 106 ntBASIC2□□□□□ -2.09
CTNND1O60716 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2□□□□□ -2.09
CTNND1O60716 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2□□□□□ -2.09
CTNND1O60716 RNU6-1023P-201ENST00000516137 106 ntBASIC2□□□□□ -2.09
CTNND1O60716 Y_RNA.714-201ENST00000517065 90 ntBASIC2□□□□□ -2.09
CTNND1O60716 MIR4419B-201ENST00000577260 68 ntBASIC2□□□□□ -2.09
CTNND1O60716 MIR4762-201ENST00000585261 75 ntBASIC2□□□□□ -2.09
CTNND1O60716 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
CTNND1O60716 SNORD27-201ENST00000363981 72 ntBASIC1.99□□□□□ -2.09
CTNND1O60716 SNORA20.1-201ENST00000364790 130 ntBASIC1.99□□□□□ -2.09
CTNND1O60716 RNU6-424P-201ENST00000384367 105 ntBASIC1.99□□□□□ -2.09
CTNND1O60716 U8.16-201ENST00000391279 133 ntBASIC1.99□□□□□ -2.09
CTNND1O60716 Y_RNA.618-201ENST00000410949 107 ntBASIC1.99□□□□□ -2.09
CTNND1O60716 MLLT10P1-201ENST00000418346 262 ntBASIC1.99□□□□□ -2.09
CTNND1O60716 CALM2P4-201ENST00000430810 426 ntBASIC1.99□□□□□ -2.09
CTNND1O60716 SNRPGP10-201ENST00000432323 225 ntBASIC1.99□□□□□ -2.09
CTNND1O60716 snoU13.9-201ENST00000458927 103 ntBASIC1.99□□□□□ -2.09
CTNND1O60716 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.99□□□□□ -2.09
CTNND1O60716 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.99□□□□□ -2.09
CTNND1O60716 MIR3198-2-201ENST00000577868 80 ntBASIC1.99□□□□□ -2.09
CTNND1O60716 MIR5688-201ENST00000580619 83 ntBASIC1.99□□□□□ -2.09
CTNND1O60716 JPX_2.1-201ENST00000614161 69 ntBASIC1.99□□□□□ -2.09
CTNND1O60716 AC068700.1-201ENST00000565862 3754 ntBASIC1.98□□□□□ -2.09
CTNND1O60716 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CTNND1O60716 RNU6-1209P-201ENST00000363655 107 ntBASIC1.98□□□□□ -2.09
CTNND1O60716 Y_RNA.796-201ENST00000364268 102 ntBASIC1.98□□□□□ -2.09
CTNND1O60716 U8.5-201ENST00000364528 136 ntBASIC1.98□□□□□ -2.09
CTNND1O60716 Y_RNA.799-201ENST00000364992 102 ntBASIC1.98□□□□□ -2.09
CTNND1O60716 MIR522-201ENST00000385071 87 ntBASIC1.98□□□□□ -2.09
CTNND1O60716 SNORD58.1-201ENST00000391313 66 ntBASIC1.98□□□□□ -2.09
CTNND1O60716 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.98□□□□□ -2.09
CTNND1O60716 Y_RNA.680-201ENST00000516441 93 ntBASIC1.98□□□□□ -2.09
CTNND1O60716 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.98□□□□□ -2.09
CTNND1O60716 CBX3P4-201ENST00000538909 354 ntBASIC1.98□□□□□ -2.09
CTNND1O60716 DNAJC19P9-201ENST00000555084 351 ntBASIC1.98□□□□□ -2.09
CTNND1O60716 MIR4724-201ENST00000579485 89 ntBASIC1.98□□□□□ -2.09
CTNND1O60716 AL359821.1-201ENST00000605519 182 ntBASIC1.98□□□□□ -2.09
CTNND1O60716 Y_RNA.802-201ENST00000614892 130 ntBASIC1.98□□□□□ -2.09
CTNND1O60716 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CTNND1O60716 MIRLET7C-201ENST00000362160 84 ntBASIC1.97□□□□□ -2.09
CTNND1O60716 RNU6-969P-201ENST00000383900 105 ntBASIC1.97□□□□□ -2.09
CTNND1O60716 Y_RNA.539-201ENST00000384635 107 ntBASIC1.97□□□□□ -2.09
CTNND1O60716 MIR660-201ENST00000385235 97 ntBASIC1.97□□□□□ -2.09
CTNND1O60716 MIR526A2-201ENST00000390198 65 ntBASIC1.97□□□□□ -2.09
CTNND1O60716 AC008834.1-201ENST00000511612 175 ntBASIC1.97□□□□□ -2.09
CTNND1O60716 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.97□□□□□ -2.09
CTNND1O60716 AC012493.3-201ENST00000604494 112 ntBASIC1.97□□□□□ -2.09
CTNND1O60716 SNORD3E-202ENST00000627253 216 ntBASIC1.97□□□□□ -2.09
CTNND1O60716 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CTNND1O60716 MIR367-201ENST00000362299 68 ntBASIC1.96□□□□□ -2.1
CTNND1O60716 Y_RNA.65-201ENST00000362846 100 ntBASIC1.96□□□□□ -2.1
CTNND1O60716 Y_RNA.76-201ENST00000362931 109 ntBASIC1.96□□□□□ -2.1
CTNND1O60716 Y_RNA.226-201ENST00000364337 114 ntBASIC1.96□□□□□ -2.1
CTNND1O60716 SNORA8.3-201ENST00000384679 139 ntBASIC1.96□□□□□ -2.1
CTNND1O60716 RNU6-131P-201ENST00000391144 107 ntBASIC1.96□□□□□ -2.1
CTNND1O60716 MIR1278-201ENST00000408753 81 ntBASIC1.96□□□□□ -2.1
CTNND1O60716 RNU6-383P-201ENST00000410864 94 ntBASIC1.96□□□□□ -2.1
CTNND1O60716 RNU7-12P-201ENST00000516030 62 ntBASIC1.96□□□□□ -2.1
CTNND1O60716 RPL23AP91-201ENST00000569211 455 ntBASIC1.96□□□□□ -2.1
CTNND1O60716 AC006006.1-201ENST00000603082 144 ntBASIC1.96□□□□□ -2.1
CTNND1O60716 AL442067.1-201ENST00000613261 223 ntBASIC1.96□□□□□ -2.1
CTNND1O60716 AC027279.3-201ENST00000625055 122 ntBASIC1.96□□□□□ -2.1
CTNND1O60716 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CTNND1O60716 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
CTNND1O60716 Y_RNA.60-201ENST00000362831 98 ntBASIC1.95□□□□□ -2.1
CTNND1O60716 Y_RNA.188-201ENST00000363952 111 ntBASIC1.95□□□□□ -2.1
CTNND1O60716 Y_RNA.292-201ENST00000364904 97 ntBASIC1.95□□□□□ -2.1
CTNND1O60716 Y_RNA.304-201ENST00000365011 112 ntBASIC1.95□□□□□ -2.1
CTNND1O60716 Y_RNA.489-201ENST00000384410 101 ntBASIC1.95□□□□□ -2.1
CTNND1O60716 MT-TG-201ENST00000387429 68 ntBASIC1.95□□□□□ -2.1
CTNND1O60716 RNA5SP496-201ENST00000391240 109 ntBASIC1.95□□□□□ -2.1
CTNND1O60716 RNU7-95P-201ENST00000459222 64 ntBASIC1.95□□□□□ -2.1
CTNND1O60716 AC005908.1-201ENST00000468701 347 ntBASIC1.95□□□□□ -2.1
CTNND1O60716 AC005840.1-201ENST00000498412 377 ntBASIC1.95□□□□□ -2.1
CTNND1O60716 CYCTP-201ENST00000504253 315 ntBASIC1.95□□□□□ -2.1
CTNND1O60716 SUMO2P16-201ENST00000519475 264 ntBASIC1.95□□□□□ -2.1
CTNND1O60716 MIR3618-201ENST00000580330 88 ntBASIC1.95□□□□□ -2.1
CTNND1O60716 AC120024.3-201ENST00000603167 156 ntBASIC1.95□□□□□ -2.1
CTNND1O60716 AL512598.1-201ENST00000610158 273 ntBASIC1.95□□□□□ -2.1
CTNND1O60716 AL365265.1-201ENST00000621045 234 ntBASIC1.95□□□□□ -2.1
CTNND1O60716 ICE2P2-201ENST00000483823 2787 ntBASIC1.95□□□□□ -2.1
CTNND1O60716 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CTNND1O60716 MIR337-201ENST00000362281 93 ntBASIC1.94□□□□□ -2.1
CTNND1O60716 RNU6-1084P-201ENST00000362498 107 ntBASIC1.94□□□□□ -2.1
CTNND1O60716 Y_RNA.269-201ENST00000364685 89 ntBASIC1.94□□□□□ -2.1
CTNND1O60716 RNU6-163P-201ENST00000384396 106 ntBASIC1.94□□□□□ -2.1
CTNND1O60716 MIR626-201ENST00000385032 94 ntBASIC1.94□□□□□ -2.1
CTNND1O60716 TRMT112P2-201ENST00000512910 132 ntBASIC1.94□□□□□ -2.1
CTNND1O60716 RNU6-1007P-201ENST00000516586 107 ntBASIC1.94□□□□□ -2.1
CTNND1O60716 RNU6-1116P-201ENST00000517269 99 ntBASIC1.94□□□□□ -2.1
CTNND1O60716 AC015688.6-201ENST00000577737 104 ntBASIC1.94□□□□□ -2.1
CTNND1O60716 AP000942.4-201ENST00000604811 241 ntBASIC1.94□□□□□ -2.1
CTNND1O60716 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.94□□□□□ -2.1
CTNND1O60716 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CTNND1O60716 RNY1P10-201ENST00000363268 113 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms