Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 RNA5SP281-201ENST00000516504 135 ntBASIC2.23□□□□□ -2.05
KDM1AO60341 RNU6-197P-201ENST00000516680 100 ntBASIC2.23□□□□□ -2.05
KDM1AO60341 SNORA31.17-201ENST00000516953 127 ntBASIC2.23□□□□□ -2.05
KDM1AO60341 RNU6-255P-201ENST00000516957 105 ntBASIC2.23□□□□□ -2.05
KDM1AO60341 AL160236.1-201ENST00000556317 195 ntBASIC2.23□□□□□ -2.05
KDM1AO60341 MIR3144-201ENST00000579460 79 ntBASIC2.23□□□□□ -2.05
KDM1AO60341 AC046143.2-201ENST00000609789 160 ntBASIC2.23□□□□□ -2.05
KDM1AO60341 MIR6766-201ENST00000622641 72 ntBASIC2.23□□□□□ -2.05
KDM1AO60341 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.23□□□□□ -2.05
KDM1AO60341 ZNF702P-202ENST00000434269 1966 ntBASIC2.23□□□□□ -2.05
KDM1AO60341 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.22□□□□□ -2.05
KDM1AO60341 AC008555.8-201ENST00000623602 2168 ntBASIC2.22□□□□□ -2.05
KDM1AO60341 RNA5SP276-201ENST00000362580 94 ntBASIC2.22□□□□□ -2.05
KDM1AO60341 RNU6-1031P-201ENST00000384773 107 ntBASIC2.22□□□□□ -2.05
KDM1AO60341 RNA5SP425-201ENST00000410336 112 ntBASIC2.22□□□□□ -2.05
KDM1AO60341 AC006461.1-201ENST00000412637 326 ntBASIC2.22□□□□□ -2.05
KDM1AO60341 SUMO1P3-201ENST00000439961 304 ntBASIC2.22□□□□□ -2.05
KDM1AO60341 RNA5SP233-201ENST00000459153 113 ntBASIC2.22□□□□□ -2.05
KDM1AO60341 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.22□□□□□ -2.05
KDM1AO60341 RNA5SP153-201ENST00000516498 76 ntBASIC2.22□□□□□ -2.05
KDM1AO60341 MIR4709-201ENST00000577272 72 ntBASIC2.22□□□□□ -2.05
KDM1AO60341 Pinc.1-201ENST00000616452 154 ntBASIC2.22□□□□□ -2.05
KDM1AO60341 MIR6873-201ENST00000622788 63 ntBASIC2.22□□□□□ -2.05
KDM1AO60341 AC021753.1-201ENST00000635724 168 ntBASIC2.22□□□□□ -2.05
KDM1AO60341 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.22□□□□□ -2.05
KDM1AO60341 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
KDM1AO60341 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
KDM1AO60341 MIR21-201ENST00000362134 72 ntBASIC2.21□□□□□ -2.06
KDM1AO60341 SNORA26-201ENST00000391286 122 ntBASIC2.21□□□□□ -2.06
KDM1AO60341 AL603908.1-201ENST00000406098 201 ntBASIC2.21□□□□□ -2.06
KDM1AO60341 RNU2-70P-201ENST00000410718 179 ntBASIC2.21□□□□□ -2.06
KDM1AO60341 RN7SKP192-201ENST00000411291 327 ntBASIC2.21□□□□□ -2.06
KDM1AO60341 RNA5SP57-201ENST00000459463 123 ntBASIC2.21□□□□□ -2.06
KDM1AO60341 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.21□□□□□ -2.06
KDM1AO60341 AC097639.2-201ENST00000603159 172 ntBASIC2.21□□□□□ -2.06
KDM1AO60341 AC064859.1-201ENST00000624741 174 ntBASIC2.21□□□□□ -2.06
KDM1AO60341 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.21□□□□□ -2.06
KDM1AO60341 Y_RNA.8-201ENST00000362353 102 ntBASIC2.2□□□□□ -2.06
KDM1AO60341 Y_RNA.170-201ENST00000363746 110 ntBASIC2.2□□□□□ -2.06
KDM1AO60341 snoU2-30.1-201ENST00000365012 70 ntBASIC2.2□□□□□ -2.06
KDM1AO60341 SNORD116-18-201ENST00000383961 92 ntBASIC2.2□□□□□ -2.06
KDM1AO60341 MIR802-201ENST00000390235 94 ntBASIC2.2□□□□□ -2.06
KDM1AO60341 SNORD72-201ENST00000390994 80 ntBASIC2.2□□□□□ -2.06
KDM1AO60341 SNORA48.3-201ENST00000391081 134 ntBASIC2.2□□□□□ -2.06
KDM1AO60341 CYCTP-201ENST00000504253 315 ntBASIC2.2□□□□□ -2.06
KDM1AO60341 RNA5SP200-201ENST00000516360 103 ntBASIC2.2□□□□□ -2.06
KDM1AO60341 SCARNA16.3-201ENST00000516595 184 ntBASIC2.2□□□□□ -2.06
KDM1AO60341 AC120024.3-201ENST00000603167 156 ntBASIC2.2□□□□□ -2.06
KDM1AO60341 MTND1P7-201ENST00000632801 297 ntBASIC2.2□□□□□ -2.06
KDM1AO60341 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
KDM1AO60341 MIRLET7C-201ENST00000362160 84 ntBASIC2.19□□□□□ -2.06
KDM1AO60341 RNA5SP289-201ENST00000362332 137 ntBASIC2.19□□□□□ -2.06
KDM1AO60341 RNU6-1084P-201ENST00000362498 107 ntBASIC2.19□□□□□ -2.06
KDM1AO60341 SNORD50B-201ENST00000364995 70 ntBASIC2.19□□□□□ -2.06
KDM1AO60341 RNU6-449P-201ENST00000383914 107 ntBASIC2.19□□□□□ -2.06
KDM1AO60341 Y_RNA.398-201ENST00000383952 99 ntBASIC2.19□□□□□ -2.06
KDM1AO60341 RNU6-424P-201ENST00000384367 105 ntBASIC2.19□□□□□ -2.06
KDM1AO60341 Y_RNA.580-201ENST00000391004 95 ntBASIC2.19□□□□□ -2.06
KDM1AO60341 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.19□□□□□ -2.06
KDM1AO60341 RNU7-121P-201ENST00000516604 62 ntBASIC2.19□□□□□ -2.06
KDM1AO60341 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.19□□□□□ -2.06
KDM1AO60341 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.19□□□□□ -2.06
KDM1AO60341 uc_338.20-201ENST00000621563 178 ntBASIC2.19□□□□□ -2.06
KDM1AO60341 AP000553.5-201ENST00000641933 54 ntBASIC2.19□□□□□ -2.06
KDM1AO60341 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
KDM1AO60341 Y_RNA.91-201ENST00000363042 107 ntBASIC2.18□□□□□ -2.06
KDM1AO60341 SNORD14E-201ENST00000364009 85 ntBASIC2.18□□□□□ -2.06
KDM1AO60341 Y_RNA.634-201ENST00000364811 113 ntBASIC2.18□□□□□ -2.06
KDM1AO60341 Y_RNA.337-201ENST00000365312 102 ntBASIC2.18□□□□□ -2.06
KDM1AO60341 RNU6-1130P-201ENST00000365434 107 ntBASIC2.18□□□□□ -2.06
KDM1AO60341 Y_RNA.486-201ENST00000384398 107 ntBASIC2.18□□□□□ -2.06
KDM1AO60341 RPL30P13-201ENST00000418873 348 ntBASIC2.18□□□□□ -2.06
KDM1AO60341 CALM2P4-201ENST00000430810 426 ntBASIC2.18□□□□□ -2.06
KDM1AO60341 HMGN2P32-201ENST00000444648 269 ntBASIC2.18□□□□□ -2.06
KDM1AO60341 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.18□□□□□ -2.06
KDM1AO60341 SNORD45.4-201ENST00000516629 73 ntBASIC2.18□□□□□ -2.06
KDM1AO60341 MTND5P41-201ENST00000517498 206 ntBASIC2.18□□□□□ -2.06
KDM1AO60341 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.18□□□□□ -2.06
KDM1AO60341 AC021506.2-201ENST00000612354 169 ntBASIC2.18□□□□□ -2.06
KDM1AO60341 AC009831.4-201ENST00000620744 325 ntBASIC2.18□□□□□ -2.06
KDM1AO60341 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
KDM1AO60341 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
KDM1AO60341 RNU6-442P-201ENST00000383968 104 ntBASIC2.17□□□□□ -2.06
KDM1AO60341 RNU6-163P-201ENST00000384396 106 ntBASIC2.17□□□□□ -2.06
KDM1AO60341 MIR676-201ENST00000390702 67 ntBASIC2.17□□□□□ -2.06
KDM1AO60341 RNA5SP212-201ENST00000391223 107 ntBASIC2.17□□□□□ -2.06
KDM1AO60341 U8.16-201ENST00000391279 133 ntBASIC2.17□□□□□ -2.06
KDM1AO60341 AC099513.1-201ENST00000490423 301 ntBASIC2.17□□□□□ -2.06
KDM1AO60341 MIR1273D-201ENST00000577266 86 ntBASIC2.17□□□□□ -2.06
KDM1AO60341 MIR4287-201ENST00000579398 78 ntBASIC2.17□□□□□ -2.06
KDM1AO60341 MIR378D2-201ENST00000580636 98 ntBASIC2.17□□□□□ -2.06
KDM1AO60341 AL365434.2-201ENST00000607979 234 ntBASIC2.17□□□□□ -2.06
KDM1AO60341 AC027279.3-201ENST00000625055 122 ntBASIC2.17□□□□□ -2.06
KDM1AO60341 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KDM1AO60341 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
KDM1AO60341 MIR221-201ENST00000385135 110 ntBASIC2.16□□□□□ -2.06
KDM1AO60341 MIR548M-201ENST00000408260 86 ntBASIC2.16□□□□□ -2.06
KDM1AO60341 RPL23AP94-201ENST00000512518 302 ntBASIC2.16□□□□□ -2.06
KDM1AO60341 RNU7-200P-201ENST00000516105 62 ntBASIC2.16□□□□□ -2.06
KDM1AO60341 RNA5SP168-201ENST00000516642 112 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms