Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AL162730.1-201ENST00000605734 292 ntBASIC0.15□□□□□ -2.39
LSM1O15116 AC090517.2-201ENST00000614966 680 ntBASIC0.15□□□□□ -2.39
LSM1O15116 RNU6-626P-201ENST00000363354 107 ntBASIC0.14□□□□□ -2.39
LSM1O15116 Y_RNA.796-201ENST00000364268 102 ntBASIC0.14□□□□□ -2.39
LSM1O15116 Y_RNA.799-201ENST00000364992 102 ntBASIC0.14□□□□□ -2.39
LSM1O15116 SNORA69.1-201ENST00000390904 137 ntBASIC0.14□□□□□ -2.39
LSM1O15116 SNORA75.4-201ENST00000391278 119 ntBASIC0.14□□□□□ -2.39
LSM1O15116 MCFD2P1-201ENST00000417812 300 ntBASIC0.14□□□□□ -2.39
LSM1O15116 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.14□□□□□ -2.39
LSM1O15116 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.14□□□□□ -2.39
LSM1O15116 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.14□□□□□ -2.39
LSM1O15116 SNRPGP12-201ENST00000449481 213 ntBASIC0.14□□□□□ -2.39
LSM1O15116 RPL30P15-201ENST00000457129 321 ntBASIC0.14□□□□□ -2.39
LSM1O15116 RNU6-307P-201ENST00000516743 106 ntBASIC0.14□□□□□ -2.39
LSM1O15116 U4.5-201ENST00000617137 123 ntBASIC0.14□□□□□ -2.39
LSM1O15116 RNU6-324P-201ENST00000363957 106 ntBASIC0.13□□□□□ -2.39
LSM1O15116 Y_RNA.230-201ENST00000364348 109 ntBASIC0.13□□□□□ -2.39
LSM1O15116 RNA5SP517-201ENST00000364724 117 ntBASIC0.13□□□□□ -2.39
LSM1O15116 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
LSM1O15116 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.13□□□□□ -2.39
LSM1O15116 BTF3P11-201ENST00000426582 477 ntBASIC0.13□□□□□ -2.39
LSM1O15116 AC107399.1-201ENST00000451226 265 ntBASIC0.13□□□□□ -2.39
LSM1O15116 RNA5SP436-201ENST00000516020 115 ntBASIC0.13□□□□□ -2.39
LSM1O15116 RNU7-181P-201ENST00000517234 74 ntBASIC0.13□□□□□ -2.39
LSM1O15116 AC008507.4-201ENST00000585464 127 ntBASIC0.13□□□□□ -2.39
LSM1O15116 AC020891.4-201ENST00000605745 93 ntBASIC0.13□□□□□ -2.39
LSM1O15116 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.13□□□□□ -2.39
LSM1O15116 AC010487.4-201ENST00000637027 61 ntBASIC0.13□□□□□ -2.39
LSM1O15116 MIR924-201ENST00000638017 53 ntBASIC0.13□□□□□ -2.39
LSM1O15116 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.12□□□□□ -2.39
LSM1O15116 RNU6-1209P-201ENST00000363655 107 ntBASIC0.12□□□□□ -2.39
LSM1O15116 Y_RNA.329-201ENST00000365209 107 ntBASIC0.12□□□□□ -2.39
LSM1O15116 RNU6-767P-201ENST00000384132 107 ntBASIC0.12□□□□□ -2.39
LSM1O15116 RNU6-205P-201ENST00000390858 107 ntBASIC0.12□□□□□ -2.39
LSM1O15116 MTCO2P33-201ENST00000402100 465 ntBASIC0.12□□□□□ -2.39
LSM1O15116 SNORD100-201ENST00000408573 76 ntBASIC0.12□□□□□ -2.39
LSM1O15116 RNU6-710P-201ENST00000410424 105 ntBASIC0.12□□□□□ -2.39
LSM1O15116 AC015818.7-201ENST00000428754 109 ntBASIC0.12□□□□□ -2.39
LSM1O15116 AC087499.7-201ENST00000441958 109 ntBASIC0.12□□□□□ -2.39
LSM1O15116 AC022523.2-201ENST00000561045 150 ntBASIC0.12□□□□□ -2.39
LSM1O15116 MIR4771-2-201ENST00000577758 74 ntBASIC0.12□□□□□ -2.39
LSM1O15116 MIR4771-1-201ENST00000582617 74 ntBASIC0.12□□□□□ -2.39
LSM1O15116 MIR4676-201ENST00000583078 72 ntBASIC0.12□□□□□ -2.39
LSM1O15116 MIR5188-201ENST00000583467 113 ntBASIC0.12□□□□□ -2.39
LSM1O15116 POLR3GP1-201ENST00000594073 261 ntBASIC0.12□□□□□ -2.39
LSM1O15116 AP000753.3-201ENST00000604083 169 ntBASIC0.12□□□□□ -2.39
LSM1O15116 AC006441.5-201ENST00000612680 209 ntBASIC0.12□□□□□ -2.39
LSM1O15116 uc_338.4-201ENST00000616635 176 ntBASIC0.12□□□□□ -2.39
LSM1O15116 Y_RNA.456-201ENST00000384232 111 ntBASIC0.11□□□□□ -2.39
LSM1O15116 MIR625-201ENST00000385047 85 ntBASIC0.11□□□□□ -2.39
LSM1O15116 SNORA40.8-201ENST00000411034 126 ntBASIC0.11□□□□□ -2.39
LSM1O15116 AF228730.4-201ENST00000421457 183 ntBASIC0.11□□□□□ -2.39
LSM1O15116 AC091951.2-201ENST00000500762 203 ntBASIC0.11□□□□□ -2.39
LSM1O15116 AC024405.2-202ENST00000532731 184 ntBASIC0.11□□□□□ -2.39
LSM1O15116 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.11□□□□□ -2.39
LSM1O15116 AC127455.1-201ENST00000565496 145 ntBASIC0.11□□□□□ -2.39
LSM1O15116 PISRT1.1-201ENST00000616930 107 ntBASIC0.11□□□□□ -2.39
LSM1O15116 SNORD118-201ENST00000363593 134 ntBASIC0.1□□□□□ -2.39
LSM1O15116 RNY1-201ENST00000364228 113 ntBASIC0.1□□□□□ -2.39
LSM1O15116 SNORA24-201ENST00000384096 131 ntBASIC0.1□□□□□ -2.39
LSM1O15116 Y_RNA.453-201ENST00000384223 109 ntBASIC0.1□□□□□ -2.39
LSM1O15116 SNORD78.2-201ENST00000391076 69 ntBASIC0.1□□□□□ -2.39
LSM1O15116 AL603910.2-201ENST00000407268 136 ntBASIC0.1□□□□□ -2.39
LSM1O15116 RNU6-1156P-201ENST00000410365 100 ntBASIC0.1□□□□□ -2.39
LSM1O15116 RNU6-855P-201ENST00000410395 104 ntBASIC0.1□□□□□ -2.39
LSM1O15116 AC090844.1-201ENST00000422019 156 ntBASIC0.1□□□□□ -2.39
LSM1O15116 MTND1P2-201ENST00000430604 821 ntBASIC0.1□□□□□ -2.39
LSM1O15116 Z83846.1-201ENST00000446798 265 ntBASIC0.1□□□□□ -2.39
LSM1O15116 RNU6-863P-201ENST00000515989 104 ntBASIC0.1□□□□□ -2.39
LSM1O15116 RNU6-720P-201ENST00000516363 108 ntBASIC0.1□□□□□ -2.39
LSM1O15116 MIR4423-201ENST00000580922 80 ntBASIC0.1□□□□□ -2.39
LSM1O15116 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.1□□□□□ -2.39
LSM1O15116 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.39
LSM1O15116 Y_RNA.86-201ENST00000363020 111 ntBASIC0.09□□□□□ -2.4
LSM1O15116 Y_RNA.269-201ENST00000364685 89 ntBASIC0.09□□□□□ -2.4
LSM1O15116 SNORA1.2-201ENST00000365189 134 ntBASIC0.09□□□□□ -2.4
LSM1O15116 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
LSM1O15116 RNU6-847P-201ENST00000411115 108 ntBASIC0.09□□□□□ -2.4
LSM1O15116 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.09□□□□□ -2.4
LSM1O15116 AC091959.1-201ENST00000495857 238 ntBASIC0.09□□□□□ -2.4
LSM1O15116 RNU6-120P-201ENST00000516077 103 ntBASIC0.09□□□□□ -2.4
LSM1O15116 RNU7-115P-201ENST00000516433 55 ntBASIC0.09□□□□□ -2.4
LSM1O15116 RNA5SP94-201ENST00000516917 108 ntBASIC0.09□□□□□ -2.4
LSM1O15116 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.09□□□□□ -2.4
LSM1O15116 uc_338.6-201ENST00000613544 171 ntBASIC0.09□□□□□ -2.4
LSM1O15116 Y_RNA.355-201ENST00000365462 98 ntBASIC0.08□□□□□ -2.4
LSM1O15116 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
LSM1O15116 Y_RNA.570-201ENST00000384750 101 ntBASIC0.08□□□□□ -2.4
LSM1O15116 RNU6-1213P-201ENST00000517075 94 ntBASIC0.08□□□□□ -2.4
LSM1O15116 AC090897.1-201ENST00000580909 226 ntBASIC0.08□□□□□ -2.4
LSM1O15116 JPX_2.1-201ENST00000614161 69 ntBASIC0.08□□□□□ -2.4
LSM1O15116 AL669831.3-213ENST00000636676 183 ntBASIC0.08□□□□□ -2.4
LSM1O15116 RNA5SP62-201ENST00000363457 110 ntBASIC0.07□□□□□ -2.4
LSM1O15116 U8.7-201ENST00000364940 136 ntBASIC0.07□□□□□ -2.4
LSM1O15116 Y_RNA.341-201ENST00000365341 102 ntBASIC0.07□□□□□ -2.4
LSM1O15116 Y_RNA.508-201ENST00000384502 114 ntBASIC0.07□□□□□ -2.4
LSM1O15116 SNORD72-201ENST00000390994 80 ntBASIC0.07□□□□□ -2.4
LSM1O15116 AL590004.1-201ENST00000405321 300 ntBASIC0.07□□□□□ -2.4
LSM1O15116 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.07□□□□□ -2.4
LSM1O15116 SCARNA8-201ENST00000515924 131 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms