Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.23□□□□□ -2.45
SDCBPO00560 RNU6-601P-201ENST00000384540 107 ntBASIC-0.23□□□□□ -2.45
SDCBPO00560 RNU6-1148P-201ENST00000410992 104 ntBASIC-0.23□□□□□ -2.45
SDCBPO00560 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.23□□□□□ -2.45
SDCBPO00560 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.23□□□□□ -2.45
SDCBPO00560 CHEK2P4-201ENST00000450340 246 ntBASIC-0.23□□□□□ -2.45
SDCBPO00560 RNU4-49P-201ENST00000516080 140 ntBASIC-0.23□□□□□ -2.45
SDCBPO00560 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.23□□□□□ -2.45
SDCBPO00560 RNU6-448P-201ENST00000517052 107 ntBASIC-0.23□□□□□ -2.45
SDCBPO00560 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.23□□□□□ -2.45
SDCBPO00560 AC005730.3-201ENST00000583067 366 ntBASIC-0.23□□□□□ -2.45
SDCBPO00560 MIR6128-201ENST00000615528 109 ntBASIC-0.23□□□□□ -2.45
SDCBPO00560 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.24□□□□□ -2.45
SDCBPO00560 RNA5SP325-201ENST00000363756 130 ntBASIC-0.24□□□□□ -2.45
SDCBPO00560 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.24□□□□□ -2.45
SDCBPO00560 SNORD72-201ENST00000390994 80 ntBASIC-0.24□□□□□ -2.45
SDCBPO00560 RNA5SP496-201ENST00000391240 109 ntBASIC-0.24□□□□□ -2.45
SDCBPO00560 AL603910.2-201ENST00000407268 136 ntBASIC-0.24□□□□□ -2.45
SDCBPO00560 RNU6-847P-201ENST00000411115 108 ntBASIC-0.24□□□□□ -2.45
SDCBPO00560 MTND1P17-201ENST00000448961 204 ntBASIC-0.24□□□□□ -2.45
SDCBPO00560 MIR18B-201ENST00000454574 71 ntBASIC-0.24□□□□□ -2.45
SDCBPO00560 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.24□□□□□ -2.45
SDCBPO00560 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.24□□□□□ -2.45
SDCBPO00560 RPL30P15-201ENST00000457129 321 ntBASIC-0.24□□□□□ -2.45
SDCBPO00560 AC010424.1-201ENST00000506336 297 ntBASIC-0.24□□□□□ -2.45
SDCBPO00560 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.24□□□□□ -2.45
SDCBPO00560 RNU6-436P-201ENST00000516171 114 ntBASIC-0.24□□□□□ -2.45
SDCBPO00560 RNU6-864P-201ENST00000516256 108 ntBASIC-0.24□□□□□ -2.45
SDCBPO00560 AC145350.1-201ENST00000567426 208 ntBASIC-0.24□□□□□ -2.45
SDCBPO00560 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.24□□□□□ -2.45
SDCBPO00560 AL162413.1-201ENST00000603198 110 ntBASIC-0.24□□□□□ -2.45
SDCBPO00560 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.24□□□□□ -2.45
SDCBPO00560 AC090617.10-201ENST00000624308 134 ntBASIC-0.24□□□□□ -2.45
SDCBPO00560 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.25□□□□□ -2.45
SDCBPO00560 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.25□□□□□ -2.45
SDCBPO00560 SNORA32.1-201ENST00000364514 115 ntBASIC-0.25□□□□□ -2.45
SDCBPO00560 RNU6-929P-201ENST00000384429 107 ntBASIC-0.25□□□□□ -2.45
SDCBPO00560 MIR610-201ENST00000385139 96 ntBASIC-0.25□□□□□ -2.45
SDCBPO00560 MIR802-201ENST00000390235 94 ntBASIC-0.25□□□□□ -2.45
SDCBPO00560 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
SDCBPO00560 SNORA26.5-201ENST00000391215 123 ntBASIC-0.25□□□□□ -2.45
SDCBPO00560 RNU6-192P-201ENST00000391253 100 ntBASIC-0.25□□□□□ -2.45
SDCBPO00560 SNORA26-201ENST00000391286 122 ntBASIC-0.25□□□□□ -2.45
SDCBPO00560 MIR1257-201ENST00000408490 117 ntBASIC-0.25□□□□□ -2.45
SDCBPO00560 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.25□□□□□ -2.45
SDCBPO00560 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-0.25□□□□□ -2.45
SDCBPO00560 U8.19-201ENST00000459095 133 ntBASIC-0.25□□□□□ -2.45
SDCBPO00560 RNU7-129P-201ENST00000516128 62 ntBASIC-0.25□□□□□ -2.45
SDCBPO00560 RNA5SP330-201ENST00000517096 96 ntBASIC-0.25□□□□□ -2.45
SDCBPO00560 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.25□□□□□ -2.45
SDCBPO00560 AC141557.1-201ENST00000540982 400 ntBASIC-0.25□□□□□ -2.45
SDCBPO00560 AC008507.4-201ENST00000585464 127 ntBASIC-0.25□□□□□ -2.45
SDCBPO00560 AC121247.2-201ENST00000604776 136 ntBASIC-0.25□□□□□ -2.45
SDCBPO00560 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.25□□□□□ -2.45
SDCBPO00560 SNORA72.1-201ENST00000363485 129 ntBASIC-0.26□□□□□ -2.45
SDCBPO00560 SNORD114-26-201ENST00000363543 72 ntBASIC-0.26□□□□□ -2.45
SDCBPO00560 RNY3P3-201ENST00000363816 102 ntBASIC-0.26□□□□□ -2.45
SDCBPO00560 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.26□□□□□ -2.45
SDCBPO00560 SNORA24-201ENST00000384096 131 ntBASIC-0.26□□□□□ -2.45
SDCBPO00560 RNU6-1119P-201ENST00000384349 108 ntBASIC-0.26□□□□□ -2.45
SDCBPO00560 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.26□□□□□ -2.45
SDCBPO00560 MIR518F-201ENST00000384973 87 ntBASIC-0.26□□□□□ -2.45
SDCBPO00560 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.26□□□□□ -2.45
SDCBPO00560 MTND3P21-201ENST00000433774 331 ntBASIC-0.26□□□□□ -2.45
SDCBPO00560 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.26□□□□□ -2.45
SDCBPO00560 RNU1-54P-201ENST00000517181 120 ntBASIC-0.26□□□□□ -2.45
SDCBPO00560 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.26□□□□□ -2.45
SDCBPO00560 AC018462.2-201ENST00000605375 395 ntBASIC-0.26□□□□□ -2.45
SDCBPO00560 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.26□□□□□ -2.45
SDCBPO00560 SNORD38B-202ENST00000625943 69 ntBASIC-0.26□□□□□ -2.45
SDCBPO00560 AC090582.1-201ENST00000636321 199 ntBASIC-0.26□□□□□ -2.45
SDCBPO00560 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.26□□□□□ -2.45
SDCBPO00560 SNORA1.2-201ENST00000365189 134 ntBASIC-0.27□□□□□ -2.45
SDCBPO00560 RNU6-259P-201ENST00000383999 107 ntBASIC-0.27□□□□□ -2.45
SDCBPO00560 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.27□□□□□ -2.45
SDCBPO00560 RNU6-926P-201ENST00000384075 107 ntBASIC-0.27□□□□□ -2.45
SDCBPO00560 RNU6V-201ENST00000384105 107 ntBASIC-0.27□□□□□ -2.45
SDCBPO00560 RNU6-831P-201ENST00000384548 107 ntBASIC-0.27□□□□□ -2.45
SDCBPO00560 MIR588-201ENST00000384900 83 ntBASIC-0.27□□□□□ -2.45
SDCBPO00560 MIR760-201ENST00000390220 80 ntBASIC-0.27□□□□□ -2.45
SDCBPO00560 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.27□□□□□ -2.45
SDCBPO00560 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.27□□□□□ -2.45
SDCBPO00560 snoU13.16-201ENST00000459350 104 ntBASIC-0.27□□□□□ -2.45
SDCBPO00560 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.27□□□□□ -2.45
SDCBPO00560 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.27□□□□□ -2.45
SDCBPO00560 PRDX4P1-201ENST00000507189 574 ntBASIC-0.27□□□□□ -2.45
SDCBPO00560 AC026782.1-201ENST00000512952 449 ntBASIC-0.27□□□□□ -2.45
SDCBPO00560 SCARNA8-201ENST00000515924 131 ntBASIC-0.27□□□□□ -2.45
SDCBPO00560 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.27□□□□□ -2.45
SDCBPO00560 MTND3P12-201ENST00000559068 328 ntBASIC-0.27□□□□□ -2.45
SDCBPO00560 AC087685.1-201ENST00000587507 141 ntBASIC-0.27□□□□□ -2.45
SDCBPO00560 AC006441.5-201ENST00000612680 209 ntBASIC-0.27□□□□□ -2.45
SDCBPO00560 AC134878.1-201ENST00000619901 243 ntBASIC-0.27□□□□□ -2.45
SDCBPO00560 MIR499B-201ENST00000636498 73 ntBASIC-0.27□□□□□ -2.45
SDCBPO00560 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.28□□□□□ -2.45
SDCBPO00560 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.28□□□□□ -2.45
SDCBPO00560 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.28□□□□□ -2.45
SDCBPO00560 RNU6-913P-201ENST00000390913 95 ntBASIC-0.28□□□□□ -2.45
SDCBPO00560 MIR1278-201ENST00000408753 81 ntBASIC-0.28□□□□□ -2.45
SDCBPO00560 RNU2-66P-201ENST00000410650 161 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms