Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 RNU4-67P-201ENST00000364569 141 ntBASIC0.07□□□□□ -2.4
DFFAO00273 Y_RNA.404-201ENST00000383978 102 ntBASIC0.07□□□□□ -2.4
DFFAO00273 RNU6-1323P-201ENST00000384025 107 ntBASIC0.07□□□□□ -2.4
DFFAO00273 RNU6-125P-201ENST00000384505 107 ntBASIC0.07□□□□□ -2.4
DFFAO00273 Y_RNA.517-201ENST00000384551 106 ntBASIC0.07□□□□□ -2.4
DFFAO00273 MIR193B-201ENST00000384907 83 ntBASIC0.07□□□□□ -2.4
DFFAO00273 MIR613-201ENST00000385248 95 ntBASIC0.07□□□□□ -2.4
DFFAO00273 MIR802-201ENST00000390235 94 ntBASIC0.07□□□□□ -2.4
DFFAO00273 RNU6-679P-201ENST00000391003 106 ntBASIC0.07□□□□□ -2.4
DFFAO00273 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
DFFAO00273 MTCO2P33-201ENST00000402100 465 ntBASIC0.07□□□□□ -2.4
DFFAO00273 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.07□□□□□ -2.4
DFFAO00273 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.07□□□□□ -2.4
DFFAO00273 RNU6-307P-201ENST00000516743 106 ntBASIC0.07□□□□□ -2.4
DFFAO00273 RNU7-181P-201ENST00000517234 74 ntBASIC0.07□□□□□ -2.4
DFFAO00273 AC103591.3-201ENST00000608684 209 ntBASIC0.07□□□□□ -2.4
DFFAO00273 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.07□□□□□ -2.4
DFFAO00273 JPX_2.1-201ENST00000614161 69 ntBASIC0.07□□□□□ -2.4
DFFAO00273 Y_RNA.112-201ENST00000363250 102 ntBASIC0.06□□□□□ -2.4
DFFAO00273 Y_RNA.146-201ENST00000363549 102 ntBASIC0.06□□□□□ -2.4
DFFAO00273 Y_RNA.203-201ENST00000364106 102 ntBASIC0.06□□□□□ -2.4
DFFAO00273 RNU6-268P-201ENST00000364174 107 ntBASIC0.06□□□□□ -2.4
DFFAO00273 RNU6-99P-201ENST00000364721 107 ntBASIC0.06□□□□□ -2.4
DFFAO00273 Y_RNA.295-201ENST00000364918 102 ntBASIC0.06□□□□□ -2.4
DFFAO00273 Y_RNA.450-201ENST00000384198 113 ntBASIC0.06□□□□□ -2.4
DFFAO00273 Y_RNA.573-201ENST00000384763 105 ntBASIC0.06□□□□□ -2.4
DFFAO00273 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.06□□□□□ -2.4
DFFAO00273 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.06□□□□□ -2.4
DFFAO00273 RNU7-56P-201ENST00000458744 62 ntBASIC0.06□□□□□ -2.4
DFFAO00273 RNU6-966P-201ENST00000516479 104 ntBASIC0.06□□□□□ -2.4
DFFAO00273 RNU7-116P-201ENST00000516940 62 ntBASIC0.06□□□□□ -2.4
DFFAO00273 MIR6718-201ENST00000616153 80 ntBASIC0.06□□□□□ -2.4
DFFAO00273 uc_338.4-201ENST00000616635 176 ntBASIC0.06□□□□□ -2.4
DFFAO00273 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.06□□□□□ -2.4
DFFAO00273 SNORA1.2-201ENST00000365189 134 ntBASIC0.05□□□□□ -2.4
DFFAO00273 RNU6-20P-201ENST00000384106 107 ntBASIC0.05□□□□□ -2.4
DFFAO00273 Y_RNA.554-201ENST00000384672 102 ntBASIC0.05□□□□□ -2.4
DFFAO00273 SNORA69.1-201ENST00000390904 137 ntBASIC0.05□□□□□ -2.4
DFFAO00273 Y_RNA.592-201ENST00000410274 109 ntBASIC0.05□□□□□ -2.4
DFFAO00273 RNU6-855P-201ENST00000410395 104 ntBASIC0.05□□□□□ -2.4
DFFAO00273 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.05□□□□□ -2.4
DFFAO00273 SCARNA8-201ENST00000515924 131 ntBASIC0.05□□□□□ -2.4
DFFAO00273 AC024909.2-201ENST00000553035 286 ntBASIC0.05□□□□□ -2.4
DFFAO00273 AC020891.4-201ENST00000605745 93 ntBASIC0.05□□□□□ -2.4
DFFAO00273 AC087588.2-201ENST00000617667 426 ntBASIC0.05□□□□□ -2.4
DFFAO00273 Y_RNA.194-201ENST00000363985 102 ntBASIC0.04□□□□□ -2.4
DFFAO00273 Y_RNA.482-201ENST00000384377 111 ntBASIC0.04□□□□□ -2.4
DFFAO00273 RNU6-710P-201ENST00000410424 105 ntBASIC0.04□□□□□ -2.4
DFFAO00273 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.04□□□□□ -2.4
DFFAO00273 AC107399.1-201ENST00000451226 265 ntBASIC0.04□□□□□ -2.4
DFFAO00273 RNU2-13P-201ENST00000515909 113 ntBASIC0.04□□□□□ -2.4
DFFAO00273 SNORA62.5-201ENST00000516634 120 ntBASIC0.04□□□□□ -2.4
DFFAO00273 RNA5SP94-201ENST00000516917 108 ntBASIC0.04□□□□□ -2.4
DFFAO00273 POLR3GP1-201ENST00000594073 261 ntBASIC0.04□□□□□ -2.4
DFFAO00273 AC023932.2-201ENST00000603176 175 ntBASIC0.04□□□□□ -2.4
DFFAO00273 PISRT1.1-201ENST00000616930 107 ntBASIC0.04□□□□□ -2.4
DFFAO00273 MIR7111-201ENST00000619751 72 ntBASIC0.04□□□□□ -2.4
DFFAO00273 AC078938.1-201ENST00000620993 318 ntBASIC0.04□□□□□ -2.4
DFFAO00273 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
DFFAO00273 Y_RNA.72-201ENST00000362894 103 ntBASIC0.03□□□□□ -2.4
DFFAO00273 RNU6-626P-201ENST00000363354 107 ntBASIC0.03□□□□□ -2.4
DFFAO00273 Y_RNA.329-201ENST00000365209 107 ntBASIC0.03□□□□□ -2.4
DFFAO00273 RNY3P4-201ENST00000384428 101 ntBASIC0.03□□□□□ -2.4
DFFAO00273 MIR625-201ENST00000385047 85 ntBASIC0.03□□□□□ -2.4
DFFAO00273 RNU6-510P-201ENST00000391239 108 ntBASIC0.03□□□□□ -2.4
DFFAO00273 SNORD100-201ENST00000408573 76 ntBASIC0.03□□□□□ -2.4
DFFAO00273 RNU6-847P-201ENST00000411115 108 ntBASIC0.03□□□□□ -2.4
DFFAO00273 MCFD2P1-201ENST00000417812 300 ntBASIC0.03□□□□□ -2.4
DFFAO00273 BTF3P11-201ENST00000426582 477 ntBASIC0.03□□□□□ -2.4
DFFAO00273 RPL30P15-201ENST00000457129 321 ntBASIC0.03□□□□□ -2.4
DFFAO00273 RNU4-77P-201ENST00000516692 156 ntBASIC0.03□□□□□ -2.4
DFFAO00273 AP003357.1-201ENST00000604497 148 ntBASIC0.03□□□□□ -2.4
DFFAO00273 RAC1P9-201ENST00000604990 392 ntBASIC0.03□□□□□ -2.4
DFFAO00273 SNORA25.18-201ENST00000607153 114 ntBASIC0.03□□□□□ -2.4
DFFAO00273 uc_338.16-201ENST00000621804 95 ntBASIC0.03□□□□□ -2.4
DFFAO00273 MIR4315-1-201ENST00000636800 73 ntBASIC0.03□□□□□ -2.4
DFFAO00273 MIR4315-2-201ENST00000640925 73 ntBASIC0.03□□□□□ -2.4
DFFAO00273 Y_RNA.36-201ENST00000362602 112 ntBASIC0.02□□□□□ -2.41
DFFAO00273 SNORD118-201ENST00000363593 134 ntBASIC0.02□□□□□ -2.41
DFFAO00273 RNU4-75P-201ENST00000364621 146 ntBASIC0.02□□□□□ -2.41
DFFAO00273 Y_RNA.339-201ENST00000365325 102 ntBASIC0.02□□□□□ -2.41
DFFAO00273 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
DFFAO00273 RNU6-815P-201ENST00000384080 113 ntBASIC0.02□□□□□ -2.41
DFFAO00273 Y_RNA.476-201ENST00000384347 108 ntBASIC0.02□□□□□ -2.41
DFFAO00273 SNORD78.2-201ENST00000391076 69 ntBASIC0.02□□□□□ -2.41
DFFAO00273 MIR938-201ENST00000401216 83 ntBASIC0.02□□□□□ -2.41
DFFAO00273 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.02□□□□□ -2.41
DFFAO00273 AC073261.1-201ENST00000429409 121 ntBASIC0.02□□□□□ -2.41
DFFAO00273 RNU7-62P-201ENST00000458856 62 ntBASIC0.02□□□□□ -2.41
DFFAO00273 RNU6-863P-201ENST00000515989 104 ntBASIC0.02□□□□□ -2.41
DFFAO00273 AC069113.3-201ENST00000521019 150 ntBASIC0.02□□□□□ -2.41
DFFAO00273 AC024405.2-202ENST00000532731 184 ntBASIC0.02□□□□□ -2.41
DFFAO00273 MIR1273G-201ENST00000577677 100 ntBASIC0.02□□□□□ -2.41
DFFAO00273 MIR5188-201ENST00000583467 113 ntBASIC0.02□□□□□ -2.41
DFFAO00273 AC008507.4-201ENST00000585464 127 ntBASIC0.02□□□□□ -2.41
DFFAO00273 AC022441.3-201ENST00000605737 136 ntBASIC0.02□□□□□ -2.41
DFFAO00273 Y_RNA.88-201ENST00000363029 99 ntBASIC0.01□□□□□ -2.41
DFFAO00273 RNU6-1209P-201ENST00000363655 107 ntBASIC0.01□□□□□ -2.41
DFFAO00273 Y_RNA.230-201ENST00000364348 109 ntBASIC0.01□□□□□ -2.41
DFFAO00273 Y_RNA.310-201ENST00000365063 113 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms