Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 U8.7-201ENST00000364940 136 ntBASIC0.26□□□□□ -2.37
SMKR1H3BMG3 RNU6-708P-201ENST00000384217 107 ntBASIC0.26□□□□□ -2.37
SMKR1H3BMG3 MIR520F-201ENST00000384824 87 ntBASIC0.26□□□□□ -2.37
SMKR1H3BMG3 MIR520H-201ENST00000385126 88 ntBASIC0.26□□□□□ -2.37
SMKR1H3BMG3 AL590004.1-201ENST00000405321 300 ntBASIC0.26□□□□□ -2.37
SMKR1H3BMG3 AC092473.1-201ENST00000441098 221 ntBASIC0.26□□□□□ -2.37
SMKR1H3BMG3 SCARNA8-201ENST00000515924 131 ntBASIC0.26□□□□□ -2.37
SMKR1H3BMG3 RNU6-977P-201ENST00000516411 103 ntBASIC0.26□□□□□ -2.37
SMKR1H3BMG3 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
SMKR1H3BMG3 RNU7-181P-201ENST00000517234 74 ntBASIC0.26□□□□□ -2.37
SMKR1H3BMG3 MIR4714-201ENST00000580728 77 ntBASIC0.26□□□□□ -2.37
SMKR1H3BMG3 AC008507.4-201ENST00000585464 127 ntBASIC0.26□□□□□ -2.37
SMKR1H3BMG3 SNORD45.3-201ENST00000363836 72 ntBASIC0.25□□□□□ -2.37
SMKR1H3BMG3 Y_RNA.279-201ENST00000364763 95 ntBASIC0.25□□□□□ -2.37
SMKR1H3BMG3 MIR216A-201ENST00000385063 110 ntBASIC0.25□□□□□ -2.37
SMKR1H3BMG3 RNU6-847P-201ENST00000411115 108 ntBASIC0.25□□□□□ -2.37
SMKR1H3BMG3 AF228730.4-201ENST00000421457 183 ntBASIC0.25□□□□□ -2.37
SMKR1H3BMG3 AC099799.1-201ENST00000439809 192 ntBASIC0.25□□□□□ -2.37
SMKR1H3BMG3 RNU6-1007P-201ENST00000516586 107 ntBASIC0.25□□□□□ -2.37
SMKR1H3BMG3 MIR4423-201ENST00000580922 80 ntBASIC0.25□□□□□ -2.37
SMKR1H3BMG3 AL359821.1-201ENST00000605519 182 ntBASIC0.25□□□□□ -2.37
SMKR1H3BMG3 snoU13.31-201ENST00000607291 104 ntBASIC0.25□□□□□ -2.37
SMKR1H3BMG3 AC006441.5-201ENST00000612680 209 ntBASIC0.25□□□□□ -2.37
SMKR1H3BMG3 MIR548AY-201ENST00000617669 107 ntBASIC0.25□□□□□ -2.37
SMKR1H3BMG3 Y_RNA.242-201ENST00000364473 110 ntBASIC0.24□□□□□ -2.37
SMKR1H3BMG3 Y_RNA.331-201ENST00000365267 102 ntBASIC0.24□□□□□ -2.37
SMKR1H3BMG3 MTCO3P10-201ENST00000455912 772 ntBASIC0.24□□□□□ -2.37
SMKR1H3BMG3 snoU13.21-201ENST00000459368 105 ntBASIC0.24□□□□□ -2.37
SMKR1H3BMG3 RNU2-13P-201ENST00000515909 113 ntBASIC0.24□□□□□ -2.37
SMKR1H3BMG3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.24□□□□□ -2.37
SMKR1H3BMG3 MIR3612-201ENST00000579753 87 ntBASIC0.24□□□□□ -2.37
SMKR1H3BMG3 AL162730.1-201ENST00000605734 292 ntBASIC0.24□□□□□ -2.37
SMKR1H3BMG3 uc_338.4-201ENST00000616635 176 ntBASIC0.24□□□□□ -2.37
SMKR1H3BMG3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.24□□□□□ -2.37
SMKR1H3BMG3 RNU6-490P-201ENST00000362985 107 ntBASIC0.23□□□□□ -2.37
SMKR1H3BMG3 Y_RNA.462-201ENST00000384268 102 ntBASIC0.23□□□□□ -2.37
SMKR1H3BMG3 RNU6-205P-201ENST00000390858 107 ntBASIC0.23□□□□□ -2.37
SMKR1H3BMG3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.23□□□□□ -2.37
SMKR1H3BMG3 SNORD83.1-201ENST00000411362 77 ntBASIC0.23□□□□□ -2.37
SMKR1H3BMG3 FCF1P9-201ENST00000412546 282 ntBASIC0.23□□□□□ -2.37
SMKR1H3BMG3 PDCL2P1-201ENST00000419302 352 ntBASIC0.23□□□□□ -2.37
SMKR1H3BMG3 Y_RNA.653-201ENST00000459091 95 ntBASIC0.23□□□□□ -2.37
SMKR1H3BMG3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.23□□□□□ -2.37
SMKR1H3BMG3 MIR4771-2-201ENST00000577758 74 ntBASIC0.23□□□□□ -2.37
SMKR1H3BMG3 MIR4771-1-201ENST00000582617 74 ntBASIC0.23□□□□□ -2.37
SMKR1H3BMG3 MIR4264-201ENST00000583520 66 ntBASIC0.23□□□□□ -2.37
SMKR1H3BMG3 DEFB117-201ENST00000602356 141 ntBASIC0.23□□□□□ -2.37
SMKR1H3BMG3 AC136443.5-201ENST00000603741 370 ntBASIC0.23□□□□□ -2.37
SMKR1H3BMG3 AC093783.1-201ENST00000612976 329 ntBASIC0.23□□□□□ -2.37
SMKR1H3BMG3 AC025253.1-201ENST00000613623 543 ntBASIC0.23□□□□□ -2.37
SMKR1H3BMG3 SNORD81.1-201ENST00000363064 77 ntBASIC0.22□□□□□ -2.37
SMKR1H3BMG3 Y_RNA.160-201ENST00000363677 92 ntBASIC0.22□□□□□ -2.37
SMKR1H3BMG3 RNU6-125P-201ENST00000384505 107 ntBASIC0.22□□□□□ -2.37
SMKR1H3BMG3 SNORD72-201ENST00000390994 80 ntBASIC0.22□□□□□ -2.37
SMKR1H3BMG3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.22□□□□□ -2.37
SMKR1H3BMG3 AC096644.2-201ENST00000429278 159 ntBASIC0.22□□□□□ -2.37
SMKR1H3BMG3 AC092628.1-201ENST00000436250 252 ntBASIC0.22□□□□□ -2.37
SMKR1H3BMG3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.22□□□□□ -2.37
SMKR1H3BMG3 FGF7P6-202ENST00000451282 293 ntBASIC0.22□□□□□ -2.37
SMKR1H3BMG3 RNU6-437P-201ENST00000459408 95 ntBASIC0.22□□□□□ -2.37
SMKR1H3BMG3 AC002350.1-201ENST00000490759 375 ntBASIC0.22□□□□□ -2.37
SMKR1H3BMG3 TRMT112P2-201ENST00000512910 132 ntBASIC0.22□□□□□ -2.37
SMKR1H3BMG3 MIR4804-201ENST00000581683 73 ntBASIC0.22□□□□□ -2.37
SMKR1H3BMG3 VN1R91P-201ENST00000594377 169 ntBASIC0.22□□□□□ -2.37
SMKR1H3BMG3 AL080274.1-201ENST00000605565 220 ntBASIC0.22□□□□□ -2.37
SMKR1H3BMG3 LARP7P1-201ENST00000605576 316 ntBASIC0.22□□□□□ -2.37
SMKR1H3BMG3 AC133104.2-201ENST00000615272 193 ntBASIC0.22□□□□□ -2.37
SMKR1H3BMG3 AC010205.1-201ENST00000616668 449 ntBASIC0.22□□□□□ -2.37
SMKR1H3BMG3 RNU6-674P-201ENST00000363831 107 ntBASIC0.21□□□□□ -2.38
SMKR1H3BMG3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.21□□□□□ -2.38
SMKR1H3BMG3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
SMKR1H3BMG3 AL603910.2-201ENST00000407268 136 ntBASIC0.21□□□□□ -2.38
SMKR1H3BMG3 RNA5SP102-201ENST00000516865 106 ntBASIC0.21□□□□□ -2.38
SMKR1H3BMG3 RPL23AP91-201ENST00000569211 455 ntBASIC0.21□□□□□ -2.38
SMKR1H3BMG3 AC022306.2-201ENST00000617563 647 ntBASIC0.21□□□□□ -2.38
SMKR1H3BMG3 AC092634.7-201ENST00000621022 103 ntBASIC0.21□□□□□ -2.38
SMKR1H3BMG3 RNA5SP347-201ENST00000362445 119 ntBASIC0.2□□□□□ -2.38
SMKR1H3BMG3 RNU1-93P-201ENST00000364704 169 ntBASIC0.2□□□□□ -2.38
SMKR1H3BMG3 SNORD81.2-201ENST00000365153 76 ntBASIC0.2□□□□□ -2.38
SMKR1H3BMG3 MIR559-201ENST00000385188 96 ntBASIC0.2□□□□□ -2.38
SMKR1H3BMG3 MIR1278-201ENST00000408753 81 ntBASIC0.2□□□□□ -2.38
SMKR1H3BMG3 SNORA36B-201ENST00000410438 131 ntBASIC0.2□□□□□ -2.38
SMKR1H3BMG3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.2□□□□□ -2.38
SMKR1H3BMG3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.2□□□□□ -2.38
SMKR1H3BMG3 RNU7-56P-201ENST00000458744 62 ntBASIC0.2□□□□□ -2.38
SMKR1H3BMG3 AC108740.1-201ENST00000498629 225 ntBASIC0.2□□□□□ -2.38
SMKR1H3BMG3 Y_RNA.655-201ENST00000515919 96 ntBASIC0.2□□□□□ -2.38
SMKR1H3BMG3 AC006600.1-201ENST00000572529 153 ntBASIC0.2□□□□□ -2.38
SMKR1H3BMG3 MIR4676-201ENST00000583078 72 ntBASIC0.2□□□□□ -2.38
SMKR1H3BMG3 AC113139.1-201ENST00000605049 239 ntBASIC0.2□□□□□ -2.38
SMKR1H3BMG3 Y_RNA.772-201ENST00000606692 102 ntBASIC0.2□□□□□ -2.38
SMKR1H3BMG3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.2□□□□□ -2.38
SMKR1H3BMG3 RNU4-40P-201ENST00000364351 143 ntBASIC0.19□□□□□ -2.38
SMKR1H3BMG3 AC015818.7-201ENST00000428754 109 ntBASIC0.19□□□□□ -2.38
SMKR1H3BMG3 AC087499.7-201ENST00000441958 109 ntBASIC0.19□□□□□ -2.38
SMKR1H3BMG3 snoU13.16-201ENST00000459350 104 ntBASIC0.19□□□□□ -2.38
SMKR1H3BMG3 AC107297.1-201ENST00000459991 176 ntBASIC0.19□□□□□ -2.38
SMKR1H3BMG3 RNU6-559P-201ENST00000516151 98 ntBASIC0.19□□□□□ -2.38
SMKR1H3BMG3 RNU7-110P-201ENST00000516891 62 ntBASIC0.19□□□□□ -2.38
SMKR1H3BMG3 RNU6-699P-201ENST00000517081 110 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms