Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 RNU6-1237P-201ENST00000384777 107 ntBASIC0.67□□□□□ -2.3
HMGB1P1B2RPK0 MIR520E-201ENST00000384867 87 ntBASIC0.67□□□□□ -2.3
HMGB1P1B2RPK0 SNORA36B-201ENST00000410438 131 ntBASIC0.67□□□□□ -2.3
HMGB1P1B2RPK0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.67□□□□□ -2.3
HMGB1P1B2RPK0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.67□□□□□ -2.3
HMGB1P1B2RPK0 RNU6-277P-201ENST00000516272 106 ntBASIC0.67□□□□□ -2.3
HMGB1P1B2RPK0 AC008507.4-201ENST00000585464 127 ntBASIC0.67□□□□□ -2.3
HMGB1P1B2RPK0 RPS29P30-201ENST00000600975 111 ntBASIC0.67□□□□□ -2.3
HMGB1P1B2RPK0 AC092447.9-201ENST00000603395 144 ntBASIC0.67□□□□□ -2.3
HMGB1P1B2RPK0 Y_RNA.143-201ENST00000363520 106 ntBASIC0.66□□□□□ -2.3
HMGB1P1B2RPK0 Y_RNA.813-201ENST00000364639 102 ntBASIC0.66□□□□□ -2.3
HMGB1P1B2RPK0 Y_RNA.458-201ENST00000384240 102 ntBASIC0.66□□□□□ -2.3
HMGB1P1B2RPK0 RNU6-21P-201ENST00000384710 107 ntBASIC0.66□□□□□ -2.3
HMGB1P1B2RPK0 RNU2-14P-201ENST00000411053 191 ntBASIC0.66□□□□□ -2.3
HMGB1P1B2RPK0 SNORD83.1-201ENST00000411362 77 ntBASIC0.66□□□□□ -2.3
HMGB1P1B2RPK0 RNU7-141P-201ENST00000459304 62 ntBASIC0.66□□□□□ -2.3
HMGB1P1B2RPK0 RNU6-437P-201ENST00000459408 95 ntBASIC0.66□□□□□ -2.3
HMGB1P1B2RPK0 AC010655.3-201ENST00000478818 450 ntBASIC0.66□□□□□ -2.3
HMGB1P1B2RPK0 AC104695.3-201ENST00000604052 296 ntBASIC0.66□□□□□ -2.3
HMGB1P1B2RPK0 uc_338.17-201ENST00000619633 179 ntBASIC0.66□□□□□ -2.3
HMGB1P1B2RPK0 Y_RNA.80-201ENST00000362996 102 ntBASIC0.65□□□□□ -2.31
HMGB1P1B2RPK0 Y_RNA.168-201ENST00000363740 102 ntBASIC0.65□□□□□ -2.31
HMGB1P1B2RPK0 Y_RNA.485-201ENST00000384395 102 ntBASIC0.65□□□□□ -2.31
HMGB1P1B2RPK0 MIR1261-201ENST00000408659 82 ntBASIC0.65□□□□□ -2.31
HMGB1P1B2RPK0 AC138393.2-201ENST00000414742 246 ntBASIC0.65□□□□□ -2.31
HMGB1P1B2RPK0 COX6CP14-201ENST00000469580 174 ntBASIC0.65□□□□□ -2.31
HMGB1P1B2RPK0 RNU6-830P-201ENST00000516353 107 ntBASIC0.65□□□□□ -2.31
HMGB1P1B2RPK0 SNORA20.3-201ENST00000516880 132 ntBASIC0.65□□□□□ -2.31
HMGB1P1B2RPK0 MIR3973-201ENST00000579824 107 ntBASIC0.65□□□□□ -2.31
HMGB1P1B2RPK0 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
HMGB1P1B2RPK0 AC010205.1-201ENST00000616668 449 ntBASIC0.65□□□□□ -2.31
HMGB1P1B2RPK0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
HMGB1P1B2RPK0 Y_RNA.462-201ENST00000384268 102 ntBASIC0.64□□□□□ -2.31
HMGB1P1B2RPK0 Y_RNA.496-201ENST00000384444 101 ntBASIC0.64□□□□□ -2.31
HMGB1P1B2RPK0 MIR92A1-201ENST00000385233 78 ntBASIC0.64□□□□□ -2.31
HMGB1P1B2RPK0 MIR764-201ENST00000390811 85 ntBASIC0.64□□□□□ -2.31
HMGB1P1B2RPK0 AL603910.2-201ENST00000407268 136 ntBASIC0.64□□□□□ -2.31
HMGB1P1B2RPK0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.64□□□□□ -2.31
HMGB1P1B2RPK0 AC108706.1-201ENST00000611053 297 ntBASIC0.64□□□□□ -2.31
HMGB1P1B2RPK0 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.64□□□□□ -2.31
HMGB1P1B2RPK0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.64□□□□□ -2.31
HMGB1P1B2RPK0 AL442644.1-201ENST00000454390 3105 ntBASIC0.63□□□□□ -2.31
HMGB1P1B2RPK0 RNU4-80P-201ENST00000363200 141 ntBASIC0.63□□□□□ -2.31
HMGB1P1B2RPK0 RNU6-53P-201ENST00000365367 106 ntBASIC0.63□□□□□ -2.31
HMGB1P1B2RPK0 MIR520F-201ENST00000384824 87 ntBASIC0.63□□□□□ -2.31
HMGB1P1B2RPK0 MIR520H-201ENST00000385126 88 ntBASIC0.63□□□□□ -2.31
HMGB1P1B2RPK0 RNU6-977P-201ENST00000516411 103 ntBASIC0.63□□□□□ -2.31
HMGB1P1B2RPK0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.63□□□□□ -2.31
HMGB1P1B2RPK0 MIR2681-201ENST00000581814 105 ntBASIC0.63□□□□□ -2.31
HMGB1P1B2RPK0 MIR378A-201ENST00000362177 66 ntBASIC0.62□□□□□ -2.31
HMGB1P1B2RPK0 Y_RNA.39-201ENST00000362620 98 ntBASIC0.62□□□□□ -2.31
HMGB1P1B2RPK0 SNORD45.3-201ENST00000363836 72 ntBASIC0.62□□□□□ -2.31
HMGB1P1B2RPK0 Y_RNA.537-201ENST00000384626 109 ntBASIC0.62□□□□□ -2.31
HMGB1P1B2RPK0 AC004941.2-201ENST00000427009 228 ntBASIC0.62□□□□□ -2.31
HMGB1P1B2RPK0 AL160004.2-201ENST00000432935 350 ntBASIC0.62□□□□□ -2.31
HMGB1P1B2RPK0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.62□□□□□ -2.31
HMGB1P1B2RPK0 snoU13.23-201ENST00000458863 104 ntBASIC0.62□□□□□ -2.31
HMGB1P1B2RPK0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
HMGB1P1B2RPK0 RNU6-934P-201ENST00000365154 107 ntBASIC0.61□□□□□ -2.31
HMGB1P1B2RPK0 Y_RNA.383-201ENST00000383855 97 ntBASIC0.61□□□□□ -2.31
HMGB1P1B2RPK0 Y_RNA.390-201ENST00000383932 102 ntBASIC0.61□□□□□ -2.31
HMGB1P1B2RPK0 Y_RNA.439-201ENST00000384119 94 ntBASIC0.61□□□□□ -2.31
HMGB1P1B2RPK0 Y_RNA.551-201ENST00000384661 102 ntBASIC0.61□□□□□ -2.31
HMGB1P1B2RPK0 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.61□□□□□ -2.31
HMGB1P1B2RPK0 RNU4-77P-201ENST00000516692 156 ntBASIC0.61□□□□□ -2.31
HMGB1P1B2RPK0 MIR4771-2-201ENST00000577758 74 ntBASIC0.61□□□□□ -2.31
HMGB1P1B2RPK0 MIR4771-1-201ENST00000582617 74 ntBASIC0.61□□□□□ -2.31
HMGB1P1B2RPK0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.61□□□□□ -2.31
HMGB1P1B2RPK0 AP000753.3-201ENST00000604083 169 ntBASIC0.61□□□□□ -2.31
HMGB1P1B2RPK0 AL121655.1-201ENST00000605811 308 ntBASIC0.61□□□□□ -2.31
HMGB1P1B2RPK0 RMST_2.1-201ENST00000617263 136 ntBASIC0.61□□□□□ -2.31
HMGB1P1B2RPK0 AC243994.1-201ENST00000618627 109 ntBASIC0.61□□□□□ -2.31
HMGB1P1B2RPK0 RNU6-369P-201ENST00000362515 102 ntBASIC0.6□□□□□ -2.31
HMGB1P1B2RPK0 Y_RNA.286-201ENST00000364813 102 ntBASIC0.6□□□□□ -2.31
HMGB1P1B2RPK0 SNORA1.2-201ENST00000365189 134 ntBASIC0.6□□□□□ -2.31
HMGB1P1B2RPK0 MIR140-201ENST00000385282 100 ntBASIC0.6□□□□□ -2.31
HMGB1P1B2RPK0 POLR2KP2-201ENST00000438155 177 ntBASIC0.6□□□□□ -2.31
HMGB1P1B2RPK0 Y_RNA.632-201ENST00000459189 102 ntBASIC0.6□□□□□ -2.31
HMGB1P1B2RPK0 RN7SL429P-201ENST00000479090 223 ntBASIC0.6□□□□□ -2.31
HMGB1P1B2RPK0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.6□□□□□ -2.31
HMGB1P1B2RPK0 RN7SL489P-201ENST00000486185 223 ntBASIC0.6□□□□□ -2.31
HMGB1P1B2RPK0 RN7SL327P-201ENST00000488659 223 ntBASIC0.6□□□□□ -2.31
HMGB1P1B2RPK0 SCARNA8-201ENST00000515924 131 ntBASIC0.6□□□□□ -2.31
HMGB1P1B2RPK0 AP003484.1-201ENST00000530974 250 ntBASIC0.6□□□□□ -2.31
HMGB1P1B2RPK0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.6□□□□□ -2.31
HMGB1P1B2RPK0 AC005357.1-201ENST00000588399 301 ntBASIC0.6□□□□□ -2.31
HMGB1P1B2RPK0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.6□□□□□ -2.31
HMGB1P1B2RPK0 RN7SL853P-201ENST00000617250 223 ntBASIC0.6□□□□□ -2.31
HMGB1P1B2RPK0 AC099654.14-201ENST00000638599 341 ntBASIC0.6□□□□□ -2.31
HMGB1P1B2RPK0 Y_RNA.376-201ENST00000365638 108 ntBASIC0.59□□□□□ -2.31
HMGB1P1B2RPK0 RNU6-125P-201ENST00000384505 107 ntBASIC0.59□□□□□ -2.31
HMGB1P1B2RPK0 MTCO2P12-201ENST00000427426 682 ntBASIC0.59□□□□□ -2.31
HMGB1P1B2RPK0 AC108210.2-201ENST00000503681 201 ntBASIC0.59□□□□□ -2.31
HMGB1P1B2RPK0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.59□□□□□ -2.31
HMGB1P1B2RPK0 AL132765.2-201ENST00000610812 351 ntBASIC0.59□□□□□ -2.31
HMGB1P1B2RPK0 AL353997.5-201ENST00000618886 171 ntBASIC0.59□□□□□ -2.31
HMGB1P1B2RPK0 MIR6835-201ENST00000621552 64 ntBASIC0.59□□□□□ -2.31
HMGB1P1B2RPK0 Y_RNA.187-201ENST00000363918 113 ntBASIC0.58□□□□□ -2.32
HMGB1P1B2RPK0 MIR573-201ENST00000384964 99 ntBASIC0.58□□□□□ -2.32
HMGB1P1B2RPK0 RNU6-847P-201ENST00000411115 108 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms