Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 AC084781.2-201ENST00000615568 161 ntBASIC0.5□□□□□ -2.33
TRAV39A0A0B4J263 MIR6788-201ENST00000618842 66 ntBASIC0.5□□□□□ -2.33
TRAV39A0A0B4J263 SNORD81.1-201ENST00000363064 77 ntBASIC0.49□□□□□ -2.33
TRAV39A0A0B4J263 RNU6-1209P-201ENST00000363655 107 ntBASIC0.49□□□□□ -2.33
TRAV39A0A0B4J263 SNORD113.3-201ENST00000364630 78 ntBASIC0.49□□□□□ -2.33
TRAV39A0A0B4J263 RNU6-42P-201ENST00000384165 107 ntBASIC0.49□□□□□ -2.33
TRAV39A0A0B4J263 RNU6-110P-201ENST00000384508 104 ntBASIC0.49□□□□□ -2.33
TRAV39A0A0B4J263 MIR1278-201ENST00000408753 81 ntBASIC0.49□□□□□ -2.33
TRAV39A0A0B4J263 MTND1P14-201ENST00000427400 950 ntBASIC0.49□□□□□ -2.33
TRAV39A0A0B4J263 RNU6-1110P-201ENST00000516462 101 ntBASIC0.49□□□□□ -2.33
TRAV39A0A0B4J263 Y_RNA.718-201ENST00000517110 102 ntBASIC0.49□□□□□ -2.33
TRAV39A0A0B4J263 RNU6-1223P-201ENST00000517124 104 ntBASIC0.49□□□□□ -2.33
TRAV39A0A0B4J263 SNORD116.3-201ENST00000517176 78 ntBASIC0.49□□□□□ -2.33
TRAV39A0A0B4J263 MIR4714-201ENST00000580728 77 ntBASIC0.49□□□□□ -2.33
TRAV39A0A0B4J263 RBM11P1-201ENST00000604951 799 ntBASIC0.49□□□□□ -2.33
TRAV39A0A0B4J263 AC011373.1-201ENST00000607270 237 ntBASIC0.49□□□□□ -2.33
TRAV39A0A0B4J263 AC025253.1-201ENST00000613623 543 ntBASIC0.49□□□□□ -2.33
TRAV39A0A0B4J263 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
TRAV39A0A0B4J263 MIR4272-201ENST00000635924 64 ntBASIC0.49□□□□□ -2.33
TRAV39A0A0B4J263 MIR1302-1-201ENST00000637932 143 ntBASIC0.49□□□□□ -2.33
TRAV39A0A0B4J263 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.49□□□□□ -2.33
TRAV39A0A0B4J263 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 RNU6-442P-201ENST00000383968 104 ntBASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 Y_RNA.456-201ENST00000384232 111 ntBASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 Y_RNA.463-201ENST00000384271 102 ntBASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 MIR92A1-201ENST00000385233 78 ntBASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 RNU4-30P-201ENST00000410245 143 ntBASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 RNA5SP222-201ENST00000411039 105 ntBASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 AC138393.2-201ENST00000414742 246 ntBASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 AF228730.4-201ENST00000421457 183 ntBASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 AC024067.1-201ENST00000426199 223 ntBASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 AL392103.1-201ENST00000447000 198 ntBASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 RNU6-277P-201ENST00000516272 106 ntBASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 SNORA20.3-201ENST00000516880 132 ntBASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 RNU11-2P-201ENST00000516898 142 ntBASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 RNU7-181P-201ENST00000517234 74 ntBASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 AC127455.1-201ENST00000565496 145 ntBASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 AP003357.1-201ENST00000604497 148 ntBASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 Y_RNA.772-201ENST00000606692 102 ntBASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 AL136317.1-201ENST00000612653 226 ntBASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 Pinc.1-201ENST00000616452 154 ntBASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 AC007742.2-201ENST00000618226 398 ntBASIC0.48□□□□□ -2.33
TRAV39A0A0B4J263 Y_RNA.116-201ENST00000363292 103 ntBASIC0.47□□□□□ -2.33
TRAV39A0A0B4J263 RNU6-1048P-201ENST00000364054 107 ntBASIC0.47□□□□□ -2.33
TRAV39A0A0B4J263 Y_RNA.796-201ENST00000364268 102 ntBASIC0.47□□□□□ -2.33
TRAV39A0A0B4J263 Y_RNA.799-201ENST00000364992 102 ntBASIC0.47□□□□□ -2.33
TRAV39A0A0B4J263 SNORA36.2-201ENST00000384004 127 ntBASIC0.47□□□□□ -2.33
TRAV39A0A0B4J263 RNU1-119P-201ENST00000391122 165 ntBASIC0.47□□□□□ -2.33
TRAV39A0A0B4J263 U8.17-201ENST00000391292 132 ntBASIC0.47□□□□□ -2.33
TRAV39A0A0B4J263 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV39A0A0B4J263 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
TRAV39A0A0B4J263 HMGN1P10-201ENST00000474557 553 ntBASIC0.47□□□□□ -2.33
TRAV39A0A0B4J263 NDUFA4P2-201ENST00000489989 244 ntBASIC0.47□□□□□ -2.33
TRAV39A0A0B4J263 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.47□□□□□ -2.33
TRAV39A0A0B4J263 RNU4-54P-201ENST00000516428 129 ntBASIC0.47□□□□□ -2.33
TRAV39A0A0B4J263 RNU7-115P-201ENST00000516433 55 ntBASIC0.47□□□□□ -2.33
TRAV39A0A0B4J263 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV39A0A0B4J263 MIR4423-201ENST00000580922 80 ntBASIC0.47□□□□□ -2.33
TRAV39A0A0B4J263 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV39A0A0B4J263 AC092447.9-201ENST00000603395 144 ntBASIC0.47□□□□□ -2.33
TRAV39A0A0B4J263 MIR548AY-201ENST00000617669 107 ntBASIC0.47□□□□□ -2.33
TRAV39A0A0B4J263 AC104985.2-201ENST00000620598 500 ntBASIC0.47□□□□□ -2.33
TRAV39A0A0B4J263 MIR1-1-201ENST00000362147 71 ntBASIC0.46□□□□□ -2.34
TRAV39A0A0B4J263 RNA5SP499-201ENST00000363982 119 ntBASIC0.46□□□□□ -2.34
TRAV39A0A0B4J263 RNU6-268P-201ENST00000364174 107 ntBASIC0.46□□□□□ -2.34
TRAV39A0A0B4J263 RNU6-937P-201ENST00000384325 106 ntBASIC0.46□□□□□ -2.34
TRAV39A0A0B4J263 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
TRAV39A0A0B4J263 AC244098.3-201ENST00000424803 96 ntBASIC0.46□□□□□ -2.34
TRAV39A0A0B4J263 MIR2115-201ENST00000516657 100 ntBASIC0.46□□□□□ -2.34
TRAV39A0A0B4J263 RPL23AP91-201ENST00000569211 455 ntBASIC0.46□□□□□ -2.34
TRAV39A0A0B4J263 MIR5000-201ENST00000577717 103 ntBASIC0.46□□□□□ -2.34
TRAV39A0A0B4J263 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV39A0A0B4J263 RPS29P30-201ENST00000600975 111 ntBASIC0.46□□□□□ -2.34
TRAV39A0A0B4J263 AC015726.2-201ENST00000620112 122 ntBASIC0.46□□□□□ -2.34
TRAV39A0A0B4J263 MIR6734-201ENST00000621166 68 ntBASIC0.46□□□□□ -2.34
TRAV39A0A0B4J263 AC091925.1-201ENST00000623204 462 ntBASIC0.46□□□□□ -2.34
TRAV39A0A0B4J263 AC099654.14-201ENST00000638599 341 ntBASIC0.46□□□□□ -2.34
TRAV39A0A0B4J263 Y_RNA.39-201ENST00000362620 98 ntBASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 Y_RNA.80-201ENST00000362996 102 ntBASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 Y_RNA.122-201ENST00000363331 96 ntBASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 Y_RNA.143-201ENST00000363520 106 ntBASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 Y_RNA.390-201ENST00000383932 102 ntBASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 RNU6-945P-201ENST00000383947 107 ntBASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 Y_RNA.458-201ENST00000384240 102 ntBASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 Y_RNA.485-201ENST00000384395 102 ntBASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 SNORA51.10-201ENST00000384418 136 ntBASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 Y_RNA.496-201ENST00000384444 101 ntBASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 RNU6-21P-201ENST00000384710 107 ntBASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 RNU6-1067P-201ENST00000384752 107 ntBASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 SNORD105-201ENST00000386910 85 ntBASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 MTCO2P33-201ENST00000402100 465 ntBASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 AC098869.1-201ENST00000481627 292 ntBASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 RNA5SP121-201ENST00000516537 101 ntBASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 AL355375.2-201ENST00000574825 175 ntBASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 MIR5188-201ENST00000583467 113 ntBASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 AC087685.1-201ENST00000587507 141 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 328.3 ms