Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.03□□□□□ -2.57
TRAV1-2A0A0B4J238 MTND5P34-201ENST00000568888 325 ntBASIC-1.03□□□□□ -2.57
TRAV1-2A0A0B4J238 AC005972.2-201ENST00000604690 348 ntBASIC-1.03□□□□□ -2.57
TRAV1-2A0A0B4J238 AL133215.3-201ENST00000609801 448 ntBASIC-1.03□□□□□ -2.57
TRAV1-2A0A0B4J238 TUSC7.1-201ENST00000610969 165 ntBASIC-1.03□□□□□ -2.57
TRAV1-2A0A0B4J238 AC105081.1-201ENST00000617727 106 ntBASIC-1.03□□□□□ -2.57
TRAV1-2A0A0B4J238 AC073869.9-201ENST00000641610 120 ntBASIC-1.03□□□□□ -2.57
TRAV1-2A0A0B4J238 RNU6-47P-201ENST00000383866 107 ntBASIC-1.04□□□□□ -2.58
TRAV1-2A0A0B4J238 RNU6-708P-201ENST00000384217 107 ntBASIC-1.04□□□□□ -2.58
TRAV1-2A0A0B4J238 RNA5SP118-201ENST00000410385 109 ntBASIC-1.04□□□□□ -2.58
TRAV1-2A0A0B4J238 MTND2P18-201ENST00000419962 1030 ntBASIC-1.04□□□□□ -2.58
TRAV1-2A0A0B4J238 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.04□□□□□ -2.58
TRAV1-2A0A0B4J238 SPINT5P-201ENST00000448174 155 ntBASIC-1.04□□□□□ -2.58
TRAV1-2A0A0B4J238 AP003072.1-201ENST00000531740 145 ntBASIC-1.04□□□□□ -2.58
TRAV1-2A0A0B4J238 AC006927.3-201ENST00000638789 384 ntBASIC-1.04□□□□□ -2.58
TRAV1-2A0A0B4J238 RNU6-403P-201ENST00000363163 104 ntBASIC-1.05□□□□□ -2.58
TRAV1-2A0A0B4J238 RNU6-926P-201ENST00000384075 107 ntBASIC-1.05□□□□□ -2.58
TRAV1-2A0A0B4J238 RNY3P5-201ENST00000384127 102 ntBASIC-1.05□□□□□ -2.58
TRAV1-2A0A0B4J238 SNORA72-201ENST00000384339 132 ntBASIC-1.05□□□□□ -2.58
TRAV1-2A0A0B4J238 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.05□□□□□ -2.58
TRAV1-2A0A0B4J238 MIR635-201ENST00000384830 98 ntBASIC-1.05□□□□□ -2.58
TRAV1-2A0A0B4J238 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.05□□□□□ -2.58
TRAV1-2A0A0B4J238 RNU7-67P-201ENST00000459003 62 ntBASIC-1.05□□□□□ -2.58
TRAV1-2A0A0B4J238 snoU13.11-201ENST00000459219 104 ntBASIC-1.05□□□□□ -2.58
TRAV1-2A0A0B4J238 AC011352.1-201ENST00000512300 793 ntBASIC-1.05□□□□□ -2.58
TRAV1-2A0A0B4J238 RNU6-958P-201ENST00000516995 106 ntBASIC-1.05□□□□□ -2.58
TRAV1-2A0A0B4J238 AC134698.4-201ENST00000523451 826 ntBASIC-1.05□□□□□ -2.58
TRAV1-2A0A0B4J238 MIR4999-201ENST00000585029 91 ntBASIC-1.05□□□□□ -2.58
TRAV1-2A0A0B4J238 AC011458.1-201ENST00000604034 617 ntBASIC-1.05□□□□□ -2.58
TRAV1-2A0A0B4J238 AC006441.5-201ENST00000612680 209 ntBASIC-1.05□□□□□ -2.58
TRAV1-2A0A0B4J238 AC093726.3-201ENST00000637588 150 ntBASIC-1.05□□□□□ -2.58
TRAV1-2A0A0B4J238 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.06□□□□□ -2.58
TRAV1-2A0A0B4J238 RNA5SP245-201ENST00000364239 121 ntBASIC-1.06□□□□□ -2.58
TRAV1-2A0A0B4J238 RNU6-30P-201ENST00000384561 107 ntBASIC-1.06□□□□□ -2.58
TRAV1-2A0A0B4J238 MIR516B1-201ENST00000385211 90 ntBASIC-1.06□□□□□ -2.58
TRAV1-2A0A0B4J238 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.06□□□□□ -2.58
TRAV1-2A0A0B4J238 BX276092.1-201ENST00000427368 251 ntBASIC-1.06□□□□□ -2.58
TRAV1-2A0A0B4J238 HMGN1P33-201ENST00000432945 451 ntBASIC-1.06□□□□□ -2.58
TRAV1-2A0A0B4J238 MTCO2P16-201ENST00000436962 677 ntBASIC-1.06□□□□□ -2.58
TRAV1-2A0A0B4J238 SNORA25.13-201ENST00000516395 103 ntBASIC-1.06□□□□□ -2.58
TRAV1-2A0A0B4J238 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.06□□□□□ -2.58
TRAV1-2A0A0B4J238 MIR4491-201ENST00000581087 68 ntBASIC-1.06□□□□□ -2.58
TRAV1-2A0A0B4J238 MIR4324-201ENST00000584846 72 ntBASIC-1.06□□□□□ -2.58
TRAV1-2A0A0B4J238 AC087683.2-201ENST00000611384 326 ntBASIC-1.06□□□□□ -2.58
TRAV1-2A0A0B4J238 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.07□□□□□ -2.58
TRAV1-2A0A0B4J238 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.07□□□□□ -2.58
TRAV1-2A0A0B4J238 Y_RNA.172-201ENST00000363765 102 ntBASIC-1.07□□□□□ -2.58
TRAV1-2A0A0B4J238 RNU4-75P-201ENST00000364621 146 ntBASIC-1.07□□□□□ -2.58
TRAV1-2A0A0B4J238 RNY4P3-201ENST00000365254 95 ntBASIC-1.07□□□□□ -2.58
TRAV1-2A0A0B4J238 RNU6-933P-201ENST00000384424 107 ntBASIC-1.07□□□□□ -2.58
TRAV1-2A0A0B4J238 RNU6-83P-201ENST00000384568 112 ntBASIC-1.07□□□□□ -2.58
TRAV1-2A0A0B4J238 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.07□□□□□ -2.58
TRAV1-2A0A0B4J238 RNY3P9-201ENST00000384727 106 ntBASIC-1.07□□□□□ -2.58
TRAV1-2A0A0B4J238 U8.15-201ENST00000390947 134 ntBASIC-1.07□□□□□ -2.58
TRAV1-2A0A0B4J238 SNORD110-201ENST00000408189 75 ntBASIC-1.07□□□□□ -2.58
TRAV1-2A0A0B4J238 AC096949.1-201ENST00000412047 152 ntBASIC-1.07□□□□□ -2.58
TRAV1-2A0A0B4J238 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.07□□□□□ -2.58
TRAV1-2A0A0B4J238 AC009961.2-201ENST00000435771 251 ntBASIC-1.07□□□□□ -2.58
TRAV1-2A0A0B4J238 RNU6-437P-201ENST00000459408 95 ntBASIC-1.07□□□□□ -2.58
TRAV1-2A0A0B4J238 SCARNA1-201ENST00000517138 166 ntBASIC-1.07□□□□□ -2.58
TRAV1-2A0A0B4J238 AC024405.2-202ENST00000532731 184 ntBASIC-1.07□□□□□ -2.58
TRAV1-2A0A0B4J238 AC093023.1-201ENST00000547375 507 ntBASIC-1.07□□□□□ -2.58
TRAV1-2A0A0B4J238 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.07□□□□□ -2.58
TRAV1-2A0A0B4J238 AC103705.1-201ENST00000619013 241 ntBASIC-1.07□□□□□ -2.58
TRAV1-2A0A0B4J238 MIR6738-201ENST00000619620 64 ntBASIC-1.07□□□□□ -2.58
TRAV1-2A0A0B4J238 RNY4P34-201ENST00000364779 95 ntBASIC-1.08□□□□□ -2.58
TRAV1-2A0A0B4J238 RNU6-1145P-201ENST00000384246 107 ntBASIC-1.08□□□□□ -2.58
TRAV1-2A0A0B4J238 SNORD41.1-201ENST00000391000 69 ntBASIC-1.08□□□□□ -2.58
TRAV1-2A0A0B4J238 RNU6-195P-201ENST00000411352 109 ntBASIC-1.08□□□□□ -2.58
TRAV1-2A0A0B4J238 MTCO2P30-201ENST00000503662 364 ntBASIC-1.08□□□□□ -2.58
TRAV1-2A0A0B4J238 AP003168.1-201ENST00000530091 307 ntBASIC-1.08□□□□□ -2.58
TRAV1-2A0A0B4J238 MIR548AX-201ENST00000580117 73 ntBASIC-1.08□□□□□ -2.58
TRAV1-2A0A0B4J238 MIR5692C1-201ENST00000585309 91 ntBASIC-1.08□□□□□ -2.58
TRAV1-2A0A0B4J238 POLR3GP2-201ENST00000588366 668 ntBASIC-1.08□□□□□ -2.58
TRAV1-2A0A0B4J238 AC109347.2-201ENST00000610220 349 ntBASIC-1.08□□□□□ -2.58
TRAV1-2A0A0B4J238 AC022960.3-201ENST00000619794 441 ntBASIC-1.08□□□□□ -2.58
TRAV1-2A0A0B4J238 MIR3674-201ENST00000636576 68 ntBASIC-1.08□□□□□ -2.58
TRAV1-2A0A0B4J238 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.09□□□□□ -2.58
TRAV1-2A0A0B4J238 RNU6-517P-201ENST00000384362 110 ntBASIC-1.09□□□□□ -2.58
TRAV1-2A0A0B4J238 snoU13.19-201ENST00000459148 104 ntBASIC-1.09□□□□□ -2.58
TRAV1-2A0A0B4J238 RNU6-1114P-201ENST00000516022 107 ntBASIC-1.09□□□□□ -2.58
TRAV1-2A0A0B4J238 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.09□□□□□ -2.58
TRAV1-2A0A0B4J238 MIR4424-201ENST00000585257 86 ntBASIC-1.09□□□□□ -2.58
TRAV1-2A0A0B4J238 AL360085.1-201ENST00000604713 532 ntBASIC-1.09□□□□□ -2.58
TRAV1-2A0A0B4J238 AL391262.2-201ENST00000622466 494 ntBASIC-1.09□□□□□ -2.58
TRAV1-2A0A0B4J238 SNORD115-34-201ENST00000362441 82 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD115-12-201ENST00000362583 82 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD115-29-201ENST00000362834 82 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD115-9-201ENST00000362912 82 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD115-21-201ENST00000362963 81 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU6-490P-201ENST00000362985 107 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD115-14-201ENST00000363090 81 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD115-13-201ENST00000363358 82 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD115-41-201ENST00000363608 82 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD115-11-201ENST00000363616 82 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD115-5-201ENST00000363633 82 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD115-39-201ENST00000363694 82 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD115-4-201ENST00000363810 82 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD115-16-201ENST00000363887 82 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms