Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 MIR1298-201ENST00000408783 112 ntBASIC0.78□□□□□ -2.28
TRAPPC4Q9Y296 RPS26P48-201ENST00000491713 339 ntBASIC0.78□□□□□ -2.28
TRAPPC4Q9Y296 RNU6-947P-201ENST00000516264 106 ntBASIC0.78□□□□□ -2.28
TRAPPC4Q9Y296 RNU7-116P-201ENST00000516940 62 ntBASIC0.78□□□□□ -2.28
TRAPPC4Q9Y296 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
TRAPPC4Q9Y296 DEFB117-201ENST00000602356 141 ntBASIC0.78□□□□□ -2.28
TRAPPC4Q9Y296 AP003357.1-201ENST00000604497 148 ntBASIC0.78□□□□□ -2.28
TRAPPC4Q9Y296 PRELID3BP2-201ENST00000605362 201 ntBASIC0.78□□□□□ -2.28
TRAPPC4Q9Y296 AL133255.1-201ENST00000606374 441 ntBASIC0.78□□□□□ -2.28
TRAPPC4Q9Y296 AC011373.1-201ENST00000607270 237 ntBASIC0.78□□□□□ -2.28
TRAPPC4Q9Y296 AL391903.3-201ENST00000612158 163 ntBASIC0.78□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.804-201ENST00000615262 101 ntBASIC0.78□□□□□ -2.28
TRAPPC4Q9Y296 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.78□□□□□ -2.28
TRAPPC4Q9Y296 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.29
TRAPPC4Q9Y296 Y_RNA.80-201ENST00000362996 102 ntBASIC0.77□□□□□ -2.29
TRAPPC4Q9Y296 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
TRAPPC4Q9Y296 Y_RNA.341-201ENST00000365341 102 ntBASIC0.77□□□□□ -2.29
TRAPPC4Q9Y296 Y_RNA.439-201ENST00000384119 94 ntBASIC0.77□□□□□ -2.29
TRAPPC4Q9Y296 Y_RNA.485-201ENST00000384395 102 ntBASIC0.77□□□□□ -2.29
TRAPPC4Q9Y296 SNORA80D-201ENST00000384488 135 ntBASIC0.77□□□□□ -2.29
TRAPPC4Q9Y296 AL590004.1-201ENST00000405321 300 ntBASIC0.77□□□□□ -2.29
TRAPPC4Q9Y296 AC063976.4-201ENST00000421971 163 ntBASIC0.77□□□□□ -2.29
TRAPPC4Q9Y296 MTND1P14-201ENST00000427400 950 ntBASIC0.77□□□□□ -2.29
TRAPPC4Q9Y296 AC245047.8-201ENST00000456455 284 ntBASIC0.77□□□□□ -2.29
TRAPPC4Q9Y296 U8.20-201ENST00000459445 131 ntBASIC0.77□□□□□ -2.29
TRAPPC4Q9Y296 RNU6-351P-201ENST00000516097 100 ntBASIC0.77□□□□□ -2.29
TRAPPC4Q9Y296 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.77□□□□□ -2.29
TRAPPC4Q9Y296 MIR3192-201ENST00000584920 77 ntBASIC0.77□□□□□ -2.29
TRAPPC4Q9Y296 AL080274.1-201ENST00000605565 220 ntBASIC0.77□□□□□ -2.29
TRAPPC4Q9Y296 AL020996.3-201ENST00000606617 222 ntBASIC0.77□□□□□ -2.29
TRAPPC4Q9Y296 uc_338.22-201ENST00000622722 187 ntBASIC0.77□□□□□ -2.29
TRAPPC4Q9Y296 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
TRAPPC4Q9Y296 RNU4-50P-201ENST00000364361 141 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 RNU6-969P-201ENST00000383900 105 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 MIR1302-11-201ENST00000408051 138 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 MIR1302-9-201ENST00000408365 138 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 MIR1276-201ENST00000408707 83 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 MIR1302-10-201ENST00000408734 138 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 RNU6-130P-201ENST00000411112 103 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 POLR2J4-204ENST00000418424 324 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 AC024067.1-201ENST00000426199 223 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 AC002429.1-201ENST00000437672 148 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 MTATP6P23-201ENST00000440153 476 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 HMGN2P32-201ENST00000444648 269 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 HMGN1P10-201ENST00000474557 553 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 SNORD45.4-201ENST00000516629 73 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 RNU7-110P-201ENST00000516891 62 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 AC090142.3-201ENST00000519012 385 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 AC040926.1-201ENST00000530195 238 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 MIR4661-201ENST00000582720 75 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 FAM71BP1-201ENST00000604431 523 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 MIR1302-2-201ENST00000607096 138 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 AC006157.1-201ENST00000611750 366 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 PART1_1.1-201ENST00000611761 217 ntBASIC0.76□□□□□ -2.29
TRAPPC4Q9Y296 MIR373-201ENST00000362273 69 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 MIR96-201ENST00000362288 78 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 SNORD114-27-201ENST00000363766 70 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 RNU1-93P-201ENST00000364704 169 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 SNORD50B-201ENST00000364995 70 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 snoU2-30.1-201ENST00000365012 70 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 SNORD42.2-201ENST00000365570 69 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 RNU6-937P-201ENST00000384325 106 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 MIR15B-201ENST00000385045 98 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 SNRPGP10-201ENST00000432323 225 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 Y_RNA.639-201ENST00000458981 102 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 AC010655.3-201ENST00000478818 450 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 SNORA74.3-201ENST00000517108 154 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 AP003716.2-201ENST00000528260 108 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 AC024405.2-202ENST00000532731 184 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 AC127455.1-201ENST00000565496 145 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 AP001094.1-201ENST00000579805 193 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 MIR3973-201ENST00000579824 107 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 POLR3GP1-201ENST00000594073 261 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 AC013244.2-201ENST00000603396 103 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 AC007485.1-201ENST00000616755 206 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 MIR6767-201ENST00000637302 66 ntBASIC0.75□□□□□ -2.29
TRAPPC4Q9Y296 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.74□□□□□ -2.29
TRAPPC4Q9Y296 Y_RNA.4-201ENST00000362333 112 ntBASIC0.74□□□□□ -2.29
TRAPPC4Q9Y296 Y_RNA.143-201ENST00000363520 106 ntBASIC0.74□□□□□ -2.29
TRAPPC4Q9Y296 SNORD14.1-201ENST00000365609 90 ntBASIC0.74□□□□□ -2.29
TRAPPC4Q9Y296 Y_RNA.471-201ENST00000384312 102 ntBASIC0.74□□□□□ -2.29
TRAPPC4Q9Y296 MIR516B2-201ENST00000385190 85 ntBASIC0.74□□□□□ -2.29
TRAPPC4Q9Y296 MIR136-201ENST00000385207 82 ntBASIC0.74□□□□□ -2.29
TRAPPC4Q9Y296 SNORA75.2-201ENST00000391138 150 ntBASIC0.74□□□□□ -2.29
TRAPPC4Q9Y296 RNU6-131P-201ENST00000391144 107 ntBASIC0.74□□□□□ -2.29
TRAPPC4Q9Y296 SNORA75.3-201ENST00000391231 150 ntBASIC0.74□□□□□ -2.29
TRAPPC4Q9Y296 RNU4-30P-201ENST00000410245 143 ntBASIC0.74□□□□□ -2.29
TRAPPC4Q9Y296 MLLT10P1-201ENST00000418346 262 ntBASIC0.74□□□□□ -2.29
TRAPPC4Q9Y296 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.74□□□□□ -2.29
TRAPPC4Q9Y296 RNU7-21P-201ENST00000459430 62 ntBASIC0.74□□□□□ -2.29
TRAPPC4Q9Y296 AL117351.2-201ENST00000513571 157 ntBASIC0.74□□□□□ -2.29
TRAPPC4Q9Y296 RNU6-1170P-201ENST00000515974 106 ntBASIC0.74□□□□□ -2.29
TRAPPC4Q9Y296 RNU7-115P-201ENST00000516433 55 ntBASIC0.74□□□□□ -2.29
TRAPPC4Q9Y296 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.74□□□□□ -2.29
TRAPPC4Q9Y296 AC136443.5-201ENST00000603741 370 ntBASIC0.74□□□□□ -2.29
TRAPPC4Q9Y296 MIR6504-201ENST00000613520 61 ntBASIC0.74□□□□□ -2.29
TRAPPC4Q9Y296 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.74□□□□□ -2.29
TRAPPC4Q9Y296 RNU6-1084P-201ENST00000362498 107 ntBASIC0.73□□□□□ -2.29
TRAPPC4Q9Y296 Y_RNA.203-201ENST00000364106 102 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms