Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.55□□□□□ -2.16
SLC6A13Q9NSD5 AC245517.4-201ENST00000448601 281 ntBASIC1.55□□□□□ -2.16
SLC6A13Q9NSD5 HMGN1P7-201ENST00000491722 313 ntBASIC1.55□□□□□ -2.16
SLC6A13Q9NSD5 AC079140.2-201ENST00000506193 142 ntBASIC1.55□□□□□ -2.16
SLC6A13Q9NSD5 MTCO2P24-201ENST00000515611 426 ntBASIC1.55□□□□□ -2.16
SLC6A13Q9NSD5 SCARNA24.2-201ENST00000516968 130 ntBASIC1.55□□□□□ -2.16
SLC6A13Q9NSD5 SUMO2P16-201ENST00000519475 264 ntBASIC1.55□□□□□ -2.16
SLC6A13Q9NSD5 AC005357.1-201ENST00000588399 301 ntBASIC1.55□□□□□ -2.16
SLC6A13Q9NSD5 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.55□□□□□ -2.16
SLC6A13Q9NSD5 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.55□□□□□ -2.16
SLC6A13Q9NSD5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
SLC6A13Q9NSD5 AL391987.6-201ENST00000305671 199 ntBASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 MIR335-201ENST00000362173 94 ntBASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 MIR126-201ENST00000362291 85 ntBASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 Y_RNA.133-201ENST00000363428 110 ntBASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 Y_RNA.203-201ENST00000364106 102 ntBASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 Y_RNA.217-201ENST00000364214 105 ntBASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 Y_RNA.518-201ENST00000384552 113 ntBASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 RNU6-997P-201ENST00000384725 107 ntBASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 MTCO2P33-201ENST00000402100 465 ntBASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 SNORA36B-201ENST00000410438 131 ntBASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 AC027119.1-201ENST00000440877 241 ntBASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 RNU6-437P-201ENST00000459408 95 ntBASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 Y_RNA.641-201ENST00000459414 105 ntBASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 CYCTP-201ENST00000504253 315 ntBASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 RNU6-250P-201ENST00000516958 103 ntBASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 AL161670.1-201ENST00000554348 137 ntBASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 MIR4778-201ENST00000577635 80 ntBASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 AC120024.3-201ENST00000603167 156 ntBASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 AC134026.1-201ENST00000623249 2239 ntBASIC1.54□□□□□ -2.16
SLC6A13Q9NSD5 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.53□□□□□ -2.16
SLC6A13Q9NSD5 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
SLC6A13Q9NSD5 Y_RNA.237-201ENST00000364439 102 ntBASIC1.53□□□□□ -2.16
SLC6A13Q9NSD5 RNU6-662P-201ENST00000384253 104 ntBASIC1.53□□□□□ -2.16
SLC6A13Q9NSD5 RNU6-472P-201ENST00000384299 107 ntBASIC1.53□□□□□ -2.16
SLC6A13Q9NSD5 Y_RNA.483-201ENST00000384380 101 ntBASIC1.53□□□□□ -2.16
SLC6A13Q9NSD5 MT-TW-201ENST00000387382 68 ntBASIC1.53□□□□□ -2.16
SLC6A13Q9NSD5 MTCYBP9-201ENST00000431021 303 ntBASIC1.53□□□□□ -2.16
SLC6A13Q9NSD5 AL118496.2-201ENST00000448300 230 ntBASIC1.53□□□□□ -2.16
SLC6A13Q9NSD5 RNU1-98P-201ENST00000458992 160 ntBASIC1.53□□□□□ -2.16
SLC6A13Q9NSD5 Y_RNA.637-201ENST00000459424 114 ntBASIC1.53□□□□□ -2.16
SLC6A13Q9NSD5 RNA5SP445-201ENST00000515889 115 ntBASIC1.53□□□□□ -2.16
SLC6A13Q9NSD5 RNU7-12P-201ENST00000516030 62 ntBASIC1.53□□□□□ -2.16
SLC6A13Q9NSD5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.53□□□□□ -2.16
SLC6A13Q9NSD5 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.53□□□□□ -2.16
SLC6A13Q9NSD5 AC013791.1-201ENST00000616619 62 ntBASIC1.53□□□□□ -2.16
SLC6A13Q9NSD5 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.53□□□□□ -2.16
SLC6A13Q9NSD5 AC027279.3-201ENST00000625055 122 ntBASIC1.53□□□□□ -2.16
SLC6A13Q9NSD5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SLC6A13Q9NSD5 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SLC6A13Q9NSD5 WWP1P1-201ENST00000466609 2769 ntBASIC1.52□□□□□ -2.17
SLC6A13Q9NSD5 RNU6-674P-201ENST00000363831 107 ntBASIC1.52□□□□□ -2.17
SLC6A13Q9NSD5 Y_RNA.275-201ENST00000364726 110 ntBASIC1.52□□□□□ -2.17
SLC6A13Q9NSD5 RNU6-969P-201ENST00000383900 105 ntBASIC1.52□□□□□ -2.17
SLC6A13Q9NSD5 MIR522-201ENST00000385071 87 ntBASIC1.52□□□□□ -2.17
SLC6A13Q9NSD5 RN7SKP101-201ENST00000411376 320 ntBASIC1.52□□□□□ -2.17
SLC6A13Q9NSD5 BTF3P11-201ENST00000426582 477 ntBASIC1.52□□□□□ -2.17
SLC6A13Q9NSD5 SNRPGP10-201ENST00000432323 225 ntBASIC1.52□□□□□ -2.17
SLC6A13Q9NSD5 Y_RNA.714-201ENST00000517065 90 ntBASIC1.52□□□□□ -2.17
SLC6A13Q9NSD5 AC019176.1-201ENST00000518519 225 ntBASIC1.52□□□□□ -2.17
SLC6A13Q9NSD5 MIR2681-201ENST00000581814 105 ntBASIC1.52□□□□□ -2.17
SLC6A13Q9NSD5 AL365434.2-201ENST00000607979 234 ntBASIC1.52□□□□□ -2.17
SLC6A13Q9NSD5 JPX_2.1-201ENST00000614161 69 ntBASIC1.52□□□□□ -2.17
SLC6A13Q9NSD5 Y_RNA.44-201ENST00000362676 108 ntBASIC1.51□□□□□ -2.17
SLC6A13Q9NSD5 RNU6-199P-201ENST00000362954 107 ntBASIC1.51□□□□□ -2.17
SLC6A13Q9NSD5 RNU6-833P-201ENST00000363486 107 ntBASIC1.51□□□□□ -2.17
SLC6A13Q9NSD5 RNU6-1205P-201ENST00000363625 106 ntBASIC1.51□□□□□ -2.17
SLC6A13Q9NSD5 Y_RNA.396-201ENST00000383949 103 ntBASIC1.51□□□□□ -2.17
SLC6A13Q9NSD5 RNU6-144P-201ENST00000383951 107 ntBASIC1.51□□□□□ -2.17
SLC6A13Q9NSD5 RNU6-163P-201ENST00000384396 106 ntBASIC1.51□□□□□ -2.17
SLC6A13Q9NSD5 RNU6-1065P-201ENST00000384513 106 ntBASIC1.51□□□□□ -2.17
SLC6A13Q9NSD5 RNU6-131P-201ENST00000391144 107 ntBASIC1.51□□□□□ -2.17
SLC6A13Q9NSD5 MIR891A-201ENST00000401237 79 ntBASIC1.51□□□□□ -2.17
SLC6A13Q9NSD5 RNU6-1116P-201ENST00000517269 99 ntBASIC1.51□□□□□ -2.17
SLC6A13Q9NSD5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.51□□□□□ -2.17
SLC6A13Q9NSD5 MIR3937-201ENST00000580135 106 ntBASIC1.51□□□□□ -2.17
SLC6A13Q9NSD5 AP000942.3-201ENST00000603702 160 ntBASIC1.51□□□□□ -2.17
SLC6A13Q9NSD5 U2.14-201ENST00000615943 113 ntBASIC1.51□□□□□ -2.17
SLC6A13Q9NSD5 AL627390.1-201ENST00000396055 340 ntBASIC1.5□□□□□ -2.17
SLC6A13Q9NSD5 MIR1302-3-201ENST00000408128 138 ntBASIC1.5□□□□□ -2.17
SLC6A13Q9NSD5 MLLT10P1-201ENST00000418346 262 ntBASIC1.5□□□□□ -2.17
SLC6A13Q9NSD5 SNX2P2-201ENST00000424553 323 ntBASIC1.5□□□□□ -2.17
SLC6A13Q9NSD5 RPL39P38-201ENST00000467018 153 ntBASIC1.5□□□□□ -2.17
SLC6A13Q9NSD5 MIR5692C2-201ENST00000577959 77 ntBASIC1.5□□□□□ -2.17
SLC6A13Q9NSD5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.5□□□□□ -2.17
SLC6A13Q9NSD5 AC106754.2-201ENST00000623006 233 ntBASIC1.5□□□□□ -2.17
SLC6A13Q9NSD5 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SLC6A13Q9NSD5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.49□□□□□ -2.17
SLC6A13Q9NSD5 Y_RNA.796-201ENST00000364268 102 ntBASIC1.49□□□□□ -2.17
SLC6A13Q9NSD5 Y_RNA.799-201ENST00000364992 102 ntBASIC1.49□□□□□ -2.17
SLC6A13Q9NSD5 Y_RNA.338-201ENST00000365320 114 ntBASIC1.49□□□□□ -2.17
SLC6A13Q9NSD5 MIR320A-201ENST00000385302 82 ntBASIC1.49□□□□□ -2.17
SLC6A13Q9NSD5 RN7SKP51-201ENST00000410781 304 ntBASIC1.49□□□□□ -2.17
SLC6A13Q9NSD5 PIGPP3-201ENST00000425307 415 ntBASIC1.49□□□□□ -2.17
SLC6A13Q9NSD5 RPS27P16-201ENST00000425758 201 ntBASIC1.49□□□□□ -2.17
SLC6A13Q9NSD5 AC093850.1-201ENST00000454121 251 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms