Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MIR6079-201ENST00000635807 62 ntBASIC1.42□□□□□ -2.18
PDLIM5Q96HC4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
PDLIM5Q96HC4 AC068700.1-201ENST00000565862 3754 ntBASIC1.42□□□□□ -2.18
PDLIM5Q96HC4 SNORA25.1-201ENST00000362326 128 ntBASIC1.41□□□□□ -2.18
PDLIM5Q96HC4 Y_RNA.275-201ENST00000364726 110 ntBASIC1.41□□□□□ -2.18
PDLIM5Q96HC4 RNU6-740P-201ENST00000364734 105 ntBASIC1.41□□□□□ -2.18
PDLIM5Q96HC4 RNA5SP259-201ENST00000365541 109 ntBASIC1.41□□□□□ -2.18
PDLIM5Q96HC4 RNU6-1323P-201ENST00000384025 107 ntBASIC1.41□□□□□ -2.18
PDLIM5Q96HC4 SNORD26-201ENST00000384147 75 ntBASIC1.41□□□□□ -2.18
PDLIM5Q96HC4 SNORA72.4-201ENST00000384174 132 ntBASIC1.41□□□□□ -2.18
PDLIM5Q96HC4 MIR194-1-201ENST00000384892 85 ntBASIC1.41□□□□□ -2.18
PDLIM5Q96HC4 RNU6-763P-201ENST00000390865 106 ntBASIC1.41□□□□□ -2.18
PDLIM5Q96HC4 AL603910.2-201ENST00000407268 136 ntBASIC1.41□□□□□ -2.18
PDLIM5Q96HC4 RPL30P13-201ENST00000418873 348 ntBASIC1.41□□□□□ -2.18
PDLIM5Q96HC4 RPS27P16-201ENST00000425758 201 ntBASIC1.41□□□□□ -2.18
PDLIM5Q96HC4 AL354695.1-201ENST00000427935 228 ntBASIC1.41□□□□□ -2.18
PDLIM5Q96HC4 AC104332.1-201ENST00000440471 797 ntBASIC1.41□□□□□ -2.18
PDLIM5Q96HC4 SNORA31.10-201ENST00000516482 106 ntBASIC1.41□□□□□ -2.18
PDLIM5Q96HC4 RNU6-341P-201ENST00000516973 96 ntBASIC1.41□□□□□ -2.18
PDLIM5Q96HC4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
PDLIM5Q96HC4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.41□□□□□ -2.18
PDLIM5Q96HC4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.41□□□□□ -2.18
PDLIM5Q96HC4 snoU18.1-201ENST00000629629 71 ntBASIC1.41□□□□□ -2.18
PDLIM5Q96HC4 Y_RNA.44-201ENST00000362676 108 ntBASIC1.4□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.352-201ENST00000365439 102 ntBASIC1.4□□□□□ -2.19
PDLIM5Q96HC4 RNU6-376P-201ENST00000384731 106 ntBASIC1.4□□□□□ -2.19
PDLIM5Q96HC4 RNU11-5P-201ENST00000391216 129 ntBASIC1.4□□□□□ -2.19
PDLIM5Q96HC4 SNORD58.1-201ENST00000391313 66 ntBASIC1.4□□□□□ -2.19
PDLIM5Q96HC4 RNU7-141P-201ENST00000459304 62 ntBASIC1.4□□□□□ -2.19
PDLIM5Q96HC4 RNU7-94P-201ENST00000459576 63 ntBASIC1.4□□□□□ -2.19
PDLIM5Q96HC4 RPL39P38-201ENST00000467018 153 ntBASIC1.4□□□□□ -2.19
PDLIM5Q96HC4 RPL30P7-201ENST00000479312 323 ntBASIC1.4□□□□□ -2.19
PDLIM5Q96HC4 RNU7-115P-201ENST00000516433 55 ntBASIC1.4□□□□□ -2.19
PDLIM5Q96HC4 MIR3128-201ENST00000581957 66 ntBASIC1.4□□□□□ -2.19
PDLIM5Q96HC4 AP003357.1-201ENST00000604497 148 ntBASIC1.4□□□□□ -2.19
PDLIM5Q96HC4 AC037487.3-201ENST00000606668 112 ntBASIC1.4□□□□□ -2.19
PDLIM5Q96HC4 MIR7974-201ENST00000615835 79 ntBASIC1.4□□□□□ -2.19
PDLIM5Q96HC4 U2.14-201ENST00000615943 113 ntBASIC1.4□□□□□ -2.19
PDLIM5Q96HC4 AC068647.2-201ENST00000637380 353 ntBASIC1.4□□□□□ -2.19
PDLIM5Q96HC4 AC134026.1-201ENST00000623249 2239 ntBASIC1.39□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.117-201ENST00000363294 101 ntBASIC1.39□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.277-201ENST00000364754 102 ntBASIC1.39□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.307-201ENST00000365022 117 ntBASIC1.39□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.350-201ENST00000365409 98 ntBASIC1.39□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.416-201ENST00000384014 113 ntBASIC1.39□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.447-201ENST00000384184 113 ntBASIC1.39□□□□□ -2.19
PDLIM5Q96HC4 RNU6-1289P-201ENST00000384431 106 ntBASIC1.39□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.539-201ENST00000384635 107 ntBASIC1.39□□□□□ -2.19
PDLIM5Q96HC4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.39□□□□□ -2.19
PDLIM5Q96HC4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.39□□□□□ -2.19
PDLIM5Q96HC4 AC117454.1-201ENST00000491120 168 ntBASIC1.39□□□□□ -2.19
PDLIM5Q96HC4 RNA5SP61-201ENST00000516453 100 ntBASIC1.39□□□□□ -2.19
PDLIM5Q96HC4 RNU6-548P-201ENST00000517083 115 ntBASIC1.39□□□□□ -2.19
PDLIM5Q96HC4 RNU6-1096P-201ENST00000517089 102 ntBASIC1.39□□□□□ -2.19
PDLIM5Q96HC4 MIR4282-201ENST00000583613 67 ntBASIC1.39□□□□□ -2.19
PDLIM5Q96HC4 AL645939.4-201ENST00000604495 135 ntBASIC1.39□□□□□ -2.19
PDLIM5Q96HC4 MIR8054-201ENST00000620877 86 ntBASIC1.39□□□□□ -2.19
PDLIM5Q96HC4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
PDLIM5Q96HC4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 MIR26B-201ENST00000362251 77 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.20-201ENST00000362479 113 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 RNU6-1272P-201ENST00000362776 107 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.82-201ENST00000363000 102 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.92-201ENST00000363043 102 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.122-201ENST00000363331 96 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.235-201ENST00000364412 102 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.306-201ENST00000365015 102 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.312-201ENST00000365089 102 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.322-201ENST00000365151 102 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 RNU6-514P-201ENST00000384208 107 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 MIR520G-201ENST00000385064 90 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 SNORA12.1-201ENST00000390873 148 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 RNU6-440P-201ENST00000390882 105 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 SNRPGP13-201ENST00000442212 177 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 PGBD4P5-201ENST00000445958 426 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.650-201ENST00000459002 102 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.673-201ENST00000516306 88 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 RNU6-1291P-201ENST00000516591 104 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.777-201ENST00000516982 102 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 AC024405.2-202ENST00000532731 184 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 POLR3GP1-201ENST00000594073 261 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.771-201ENST00000598668 102 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 AL929325.1-201ENST00000603096 117 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 AL008718.3-201ENST00000610217 321 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 MIR8065-201ENST00000620577 100 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.789-201ENST00000622480 102 ntBASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
PDLIM5Q96HC4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.37□□□□□ -2.19
PDLIM5Q96HC4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
PDLIM5Q96HC4 SNORA1B-201ENST00000362535 133 ntBASIC1.37□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.76-201ENST00000362931 109 ntBASIC1.37□□□□□ -2.19
PDLIM5Q96HC4 SNORA25.8-201ENST00000364831 128 ntBASIC1.37□□□□□ -2.19
PDLIM5Q96HC4 SNORA72-201ENST00000384339 132 ntBASIC1.37□□□□□ -2.19
PDLIM5Q96HC4 Y_RNA.477-201ENST00000384352 108 ntBASIC1.37□□□□□ -2.19
PDLIM5Q96HC4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.37□□□□□ -2.19
PDLIM5Q96HC4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.37□□□□□ -2.19
PDLIM5Q96HC4 AC245047.3-201ENST00000429428 127 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms