Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 RNU6-1289P-201ENST00000384431 106 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 MIR30A-201ENST00000385092 71 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 SNORA17.3-201ENST00000391159 129 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 Y_RNA.621-201ENST00000411065 96 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 Z98949.2-201ENST00000440996 144 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 SNORD2.1-201ENST00000458762 69 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 Y_RNA.650-201ENST00000459002 102 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 RPL39P38-201ENST00000467018 153 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 RPS29P11-201ENST00000496507 171 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 Y_RNA.777-201ENST00000516982 102 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 MIR3198-2-201ENST00000577868 80 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 Y_RNA.771-201ENST00000598668 102 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 AC073349.3-201ENST00000617616 186 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 AL513423.1-201ENST00000621695 132 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 Y_RNA.789-201ENST00000622480 102 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 snoU18.1-201ENST00000629629 71 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 AC095038.3-201ENST00000634439 195 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
CCDC33Q8N5R6 RNU6-1123P-201ENST00000362347 106 ntBASIC1.92□□□□□ -2.1
CCDC33Q8N5R6 Y_RNA.203-201ENST00000364106 102 ntBASIC1.92□□□□□ -2.1
CCDC33Q8N5R6 Y_RNA.238-201ENST00000364441 102 ntBASIC1.92□□□□□ -2.1
CCDC33Q8N5R6 U8.5-201ENST00000364528 136 ntBASIC1.92□□□□□ -2.1
CCDC33Q8N5R6 Y_RNA.253-201ENST00000364562 112 ntBASIC1.92□□□□□ -2.1
CCDC33Q8N5R6 RNU6-424P-201ENST00000384367 105 ntBASIC1.92□□□□□ -2.1
CCDC33Q8N5R6 MIR548H3-201ENST00000408771 118 ntBASIC1.92□□□□□ -2.1
CCDC33Q8N5R6 RNU6-437P-201ENST00000459408 95 ntBASIC1.92□□□□□ -2.1
CCDC33Q8N5R6 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC33Q8N5R6 MIR5692C2-201ENST00000577959 77 ntBASIC1.92□□□□□ -2.1
CCDC33Q8N5R6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.92□□□□□ -2.1
CCDC33Q8N5R6 AC012493.3-201ENST00000604494 112 ntBASIC1.92□□□□□ -2.1
CCDC33Q8N5R6 AL591926.4-201ENST00000616895 298 ntBASIC1.92□□□□□ -2.1
CCDC33Q8N5R6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC33Q8N5R6 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
CCDC33Q8N5R6 AC068700.1-201ENST00000565862 3754 ntBASIC1.92□□□□□ -2.1
CCDC33Q8N5R6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.91□□□□□ -2.1
CCDC33Q8N5R6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CCDC33Q8N5R6 MIR424-201ENST00000362227 98 ntBASIC1.91□□□□□ -2.1
CCDC33Q8N5R6 Y_RNA.117-201ENST00000363294 101 ntBASIC1.91□□□□□ -2.1
CCDC33Q8N5R6 RNU6-144P-201ENST00000383951 107 ntBASIC1.91□□□□□ -2.1
CCDC33Q8N5R6 AL603910.2-201ENST00000407268 136 ntBASIC1.91□□□□□ -2.1
CCDC33Q8N5R6 PGBD4P5-201ENST00000445958 426 ntBASIC1.91□□□□□ -2.1
CCDC33Q8N5R6 SNORD13-201ENST00000459299 104 ntBASIC1.91□□□□□ -2.1
CCDC33Q8N5R6 HMGN1P7-201ENST00000491722 313 ntBASIC1.91□□□□□ -2.1
CCDC33Q8N5R6 AC108729.3-201ENST00000513484 108 ntBASIC1.91□□□□□ -2.1
CCDC33Q8N5R6 SNORA25.15-201ENST00000516487 89 ntBASIC1.91□□□□□ -2.1
CCDC33Q8N5R6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC33Q8N5R6 MIR4282-201ENST00000583613 67 ntBASIC1.91□□□□□ -2.1
CCDC33Q8N5R6 MIR4762-201ENST00000585261 75 ntBASIC1.91□□□□□ -2.1
CCDC33Q8N5R6 AC084768.2-201ENST00000622736 221 ntBASIC1.91□□□□□ -2.1
CCDC33Q8N5R6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.9□□□□□ -2.1
CCDC33Q8N5R6 MIRLET7C-201ENST00000362160 84 ntBASIC1.9□□□□□ -2.11
CCDC33Q8N5R6 Y_RNA.4-201ENST00000362333 112 ntBASIC1.9□□□□□ -2.11
CCDC33Q8N5R6 RNA5SP190-201ENST00000365222 118 ntBASIC1.9□□□□□ -2.11
CCDC33Q8N5R6 Y_RNA.350-201ENST00000365409 98 ntBASIC1.9□□□□□ -2.11
CCDC33Q8N5R6 RNU6-969P-201ENST00000383900 105 ntBASIC1.9□□□□□ -2.11
CCDC33Q8N5R6 Y_RNA.416-201ENST00000384014 113 ntBASIC1.9□□□□□ -2.11
CCDC33Q8N5R6 RNU6-211P-201ENST00000384047 107 ntBASIC1.9□□□□□ -2.11
CCDC33Q8N5R6 RPL31P63-201ENST00000422565 375 ntBASIC1.9□□□□□ -2.11
CCDC33Q8N5R6 CALM2P4-201ENST00000430810 426 ntBASIC1.9□□□□□ -2.11
CCDC33Q8N5R6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC33Q8N5R6 AC008834.1-201ENST00000511612 175 ntBASIC1.9□□□□□ -2.11
CCDC33Q8N5R6 MTND1P19-201ENST00000511780 315 ntBASIC1.9□□□□□ -2.11
CCDC33Q8N5R6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC33Q8N5R6 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC33Q8N5R6 RNU6-1205P-201ENST00000363625 106 ntBASIC1.89□□□□□ -2.11
CCDC33Q8N5R6 RNU6-457P-201ENST00000363999 107 ntBASIC1.89□□□□□ -2.11
CCDC33Q8N5R6 SNORA16.1-201ENST00000364597 132 ntBASIC1.89□□□□□ -2.11
CCDC33Q8N5R6 MIR9-3-201ENST00000385084 90 ntBASIC1.89□□□□□ -2.11
CCDC33Q8N5R6 MIR660-201ENST00000385235 97 ntBASIC1.89□□□□□ -2.11
CCDC33Q8N5R6 RNU6-651P-201ENST00000411040 105 ntBASIC1.89□□□□□ -2.11
CCDC33Q8N5R6 AC004965.1-201ENST00000413033 213 ntBASIC1.89□□□□□ -2.11
CCDC33Q8N5R6 RPL30P13-201ENST00000418873 348 ntBASIC1.89□□□□□ -2.11
CCDC33Q8N5R6 AC005908.1-201ENST00000468701 347 ntBASIC1.89□□□□□ -2.11
CCDC33Q8N5R6 RNA5SP168-201ENST00000516642 112 ntBASIC1.89□□□□□ -2.11
CCDC33Q8N5R6 AC015688.6-201ENST00000577737 104 ntBASIC1.89□□□□□ -2.11
CCDC33Q8N5R6 U8.16-201ENST00000391279 133 ntBASIC1.88□□□□□ -2.11
CCDC33Q8N5R6 AL627390.1-201ENST00000396055 340 ntBASIC1.88□□□□□ -2.11
CCDC33Q8N5R6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC33Q8N5R6 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.88□□□□□ -2.11
CCDC33Q8N5R6 MIR4643-201ENST00000577473 78 ntBASIC1.88□□□□□ -2.11
CCDC33Q8N5R6 MIR302D-201ENST00000362275 68 ntBASIC1.87□□□□□ -2.11
CCDC33Q8N5R6 MIR126-201ENST00000362291 85 ntBASIC1.87□□□□□ -2.11
CCDC33Q8N5R6 Y_RNA.20-201ENST00000362479 113 ntBASIC1.87□□□□□ -2.11
CCDC33Q8N5R6 SNORD68-201ENST00000363214 84 ntBASIC1.87□□□□□ -2.11
CCDC33Q8N5R6 Y_RNA.796-201ENST00000364268 102 ntBASIC1.87□□□□□ -2.11
CCDC33Q8N5R6 Y_RNA.277-201ENST00000364754 102 ntBASIC1.87□□□□□ -2.11
CCDC33Q8N5R6 Y_RNA.799-201ENST00000364992 102 ntBASIC1.87□□□□□ -2.11
CCDC33Q8N5R6 Y_RNA.478-201ENST00000384358 107 ntBASIC1.87□□□□□ -2.11
CCDC33Q8N5R6 MIR522-201ENST00000385071 87 ntBASIC1.87□□□□□ -2.11
CCDC33Q8N5R6 SNORD58.1-201ENST00000391313 66 ntBASIC1.87□□□□□ -2.11
CCDC33Q8N5R6 Y_RNA.590-201ENST00000410140 107 ntBASIC1.87□□□□□ -2.11
CCDC33Q8N5R6 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.87□□□□□ -2.11
CCDC33Q8N5R6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.87□□□□□ -2.11
CCDC33Q8N5R6 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.87□□□□□ -2.11
CCDC33Q8N5R6 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC33Q8N5R6 MIR4419B-201ENST00000577260 68 ntBASIC1.87□□□□□ -2.11
CCDC33Q8N5R6 MIR2681-201ENST00000581814 105 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms