Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 SNORD58B-201ENST00000607313 66 ntBASIC0.7□□□□□ -2.3
LINC01561Q8N1V8 Y_RNA.112-201ENST00000363250 102 ntBASIC0.69□□□□□ -2.3
LINC01561Q8N1V8 RNY3-201ENST00000365484 102 ntBASIC0.69□□□□□ -2.3
LINC01561Q8N1V8 Y_RNA.471-201ENST00000384312 102 ntBASIC0.69□□□□□ -2.3
LINC01561Q8N1V8 Y_RNA.529-201ENST00000384586 119 ntBASIC0.69□□□□□ -2.3
LINC01561Q8N1V8 RNU6-1067P-201ENST00000384752 107 ntBASIC0.69□□□□□ -2.3
LINC01561Q8N1V8 MIR802-201ENST00000390235 94 ntBASIC0.69□□□□□ -2.3
LINC01561Q8N1V8 AL590004.1-201ENST00000405321 300 ntBASIC0.69□□□□□ -2.3
LINC01561Q8N1V8 U7.7-201ENST00000459276 60 ntBASIC0.69□□□□□ -2.3
LINC01561Q8N1V8 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.69□□□□□ -2.3
LINC01561Q8N1V8 MIR3945-201ENST00000581853 98 ntBASIC0.69□□□□□ -2.3
LINC01561Q8N1V8 MIR4801-201ENST00000582704 82 ntBASIC0.69□□□□□ -2.3
LINC01561Q8N1V8 SNORD113-5-201ENST00000607261 78 ntBASIC0.69□□□□□ -2.3
LINC01561Q8N1V8 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.69□□□□□ -2.3
LINC01561Q8N1V8 AC008133.2-201ENST00000624540 351 ntBASIC0.69□□□□□ -2.3
LINC01561Q8N1V8 HSBP1P2-201ENST00000299671 229 ntBASIC0.68□□□□□ -2.3
LINC01561Q8N1V8 Y_RNA.197-201ENST00000364004 102 ntBASIC0.68□□□□□ -2.3
LINC01561Q8N1V8 Y_RNA.796-201ENST00000364268 102 ntBASIC0.68□□□□□ -2.3
LINC01561Q8N1V8 Y_RNA.799-201ENST00000364992 102 ntBASIC0.68□□□□□ -2.3
LINC01561Q8N1V8 Y_RNA.330-201ENST00000365230 109 ntBASIC0.68□□□□□ -2.3
LINC01561Q8N1V8 SNORA63.7-201ENST00000365579 123 ntBASIC0.68□□□□□ -2.3
LINC01561Q8N1V8 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.68□□□□□ -2.3
LINC01561Q8N1V8 ACA64.5-201ENST00000516207 127 ntBASIC0.68□□□□□ -2.3
LINC01561Q8N1V8 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
LINC01561Q8N1V8 AC136628.3-201ENST00000521868 290 ntBASIC0.68□□□□□ -2.3
LINC01561Q8N1V8 MIR548S-201ENST00000581352 82 ntBASIC0.68□□□□□ -2.3
LINC01561Q8N1V8 AC131055.1-201ENST00000584626 316 ntBASIC0.68□□□□□ -2.3
LINC01561Q8N1V8 AC104985.2-201ENST00000620598 500 ntBASIC0.68□□□□□ -2.3
LINC01561Q8N1V8 AC068700.1-201ENST00000565862 3754 ntBASIC0.68□□□□□ -2.3
LINC01561Q8N1V8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
LINC01561Q8N1V8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 AC134026.1-201ENST00000623249 2239 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 U8.7-201ENST00000364940 136 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 Y_RNA.356-201ENST00000365475 113 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 MIR1302-11-201ENST00000408051 138 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 SNORD111-201ENST00000408139 94 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 MIR1302-9-201ENST00000408365 138 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 MIR1302-10-201ENST00000408734 138 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 SNRPGP14-201ENST00000435400 219 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 POLR2KP2-201ENST00000438155 177 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 AL392103.1-201ENST00000447000 198 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 RNU6-437P-201ENST00000459408 95 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 AC087343.1-201ENST00000477341 475 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 AC117454.1-201ENST00000491120 168 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 MTND3P22-201ENST00000510932 243 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 PSMC1P5-201ENST00000512850 177 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 RNU6-1110P-201ENST00000516462 101 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 AC040926.1-201ENST00000530195 238 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 AC109810.1-201ENST00000534066 224 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 DNAJC19P9-201ENST00000555084 351 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 AC008507.4-201ENST00000585464 127 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 SNORD114-21-201ENST00000606412 72 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 MIR1302-2-201ENST00000607096 138 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 MIR6078-201ENST00000611069 100 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 AL136317.1-201ENST00000612653 226 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 AC106800.4-201ENST00000614905 153 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 Pinc.1-201ENST00000616452 154 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 MIR4251-201ENST00000635819 61 ntBASIC0.67□□□□□ -2.3
LINC01561Q8N1V8 RNU1-17P-201ENST00000363022 152 ntBASIC0.66□□□□□ -2.3
LINC01561Q8N1V8 RNU6-1209P-201ENST00000363655 107 ntBASIC0.66□□□□□ -2.3
LINC01561Q8N1V8 RNU4-38P-201ENST00000364472 129 ntBASIC0.66□□□□□ -2.3
LINC01561Q8N1V8 SNORA1.2-201ENST00000365189 134 ntBASIC0.66□□□□□ -2.3
LINC01561Q8N1V8 Y_RNA.383-201ENST00000383855 97 ntBASIC0.66□□□□□ -2.3
LINC01561Q8N1V8 RNU6-937P-201ENST00000384325 106 ntBASIC0.66□□□□□ -2.3
LINC01561Q8N1V8 RNY1P14-201ENST00000384426 108 ntBASIC0.66□□□□□ -2.3
LINC01561Q8N1V8 RNU6-110P-201ENST00000384508 104 ntBASIC0.66□□□□□ -2.3
LINC01561Q8N1V8 AC067940.1-201ENST00000458411 300 ntBASIC0.66□□□□□ -2.3
LINC01561Q8N1V8 RNU7-95P-201ENST00000459222 64 ntBASIC0.66□□□□□ -2.3
LINC01561Q8N1V8 AL353765.1-201ENST00000605514 183 ntBASIC0.66□□□□□ -2.3
LINC01561Q8N1V8 Y_RNA.222-201ENST00000364264 102 ntBASIC0.65□□□□□ -2.31
LINC01561Q8N1V8 Y_RNA.395-201ENST00000383945 109 ntBASIC0.65□□□□□ -2.31
LINC01561Q8N1V8 SNORA72.4-201ENST00000384174 132 ntBASIC0.65□□□□□ -2.31
LINC01561Q8N1V8 SNORA36B-201ENST00000410438 131 ntBASIC0.65□□□□□ -2.31
LINC01561Q8N1V8 NDUFA4P2-201ENST00000489989 244 ntBASIC0.65□□□□□ -2.31
LINC01561Q8N1V8 AC005840.1-201ENST00000498412 377 ntBASIC0.65□□□□□ -2.31
LINC01561Q8N1V8 AC113410.1-201ENST00000505029 247 ntBASIC0.65□□□□□ -2.31
LINC01561Q8N1V8 RNU6-1170P-201ENST00000515974 106 ntBASIC0.65□□□□□ -2.31
LINC01561Q8N1V8 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.65□□□□□ -2.31
LINC01561Q8N1V8 AC093027.1-201ENST00000546698 429 ntBASIC0.65□□□□□ -2.31
LINC01561Q8N1V8 AC006441.5-201ENST00000612680 209 ntBASIC0.65□□□□□ -2.31
LINC01561Q8N1V8 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
LINC01561Q8N1V8 SNORA25.3-201ENST00000363205 127 ntBASIC0.64□□□□□ -2.31
LINC01561Q8N1V8 Y_RNA.143-201ENST00000363520 106 ntBASIC0.64□□□□□ -2.31
LINC01561Q8N1V8 Y_RNA.431-201ENST00000384086 102 ntBASIC0.64□□□□□ -2.31
LINC01561Q8N1V8 Y_RNA.537-201ENST00000384626 109 ntBASIC0.64□□□□□ -2.31
LINC01561Q8N1V8 MIR146A-201ENST00000385201 99 ntBASIC0.64□□□□□ -2.31
LINC01561Q8N1V8 RNU4-30P-201ENST00000410245 143 ntBASIC0.64□□□□□ -2.31
LINC01561Q8N1V8 RNU6-613P-201ENST00000410412 108 ntBASIC0.64□□□□□ -2.31
LINC01561Q8N1V8 AC006461.1-201ENST00000412637 326 ntBASIC0.64□□□□□ -2.31
LINC01561Q8N1V8 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.64□□□□□ -2.31
LINC01561Q8N1V8 MTND1P14-201ENST00000427400 950 ntBASIC0.64□□□□□ -2.31
LINC01561Q8N1V8 RNU7-141P-201ENST00000459304 62 ntBASIC0.64□□□□□ -2.31
LINC01561Q8N1V8 SNORA59A-201ENST00000459326 152 ntBASIC0.64□□□□□ -2.31
LINC01561Q8N1V8 MIR2115-201ENST00000516657 100 ntBASIC0.64□□□□□ -2.31
LINC01561Q8N1V8 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
LINC01561Q8N1V8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.64□□□□□ -2.31
LINC01561Q8N1V8 AC006157.1-201ENST00000611750 366 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms