Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.18□□□□□ -2.22
PRPF39Q86UA1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.18□□□□□ -2.22
PRPF39Q86UA1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.18□□□□□ -2.22
PRPF39Q86UA1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
PRPF39Q86UA1 Y_RNA.122-201ENST00000363331 96 ntBASIC1.17□□□□□ -2.22
PRPF39Q86UA1 Y_RNA.456-201ENST00000384232 111 ntBASIC1.17□□□□□ -2.22
PRPF39Q86UA1 SNORA80D-201ENST00000384488 135 ntBASIC1.17□□□□□ -2.22
PRPF39Q86UA1 Y_RNA.551-201ENST00000384661 102 ntBASIC1.17□□□□□ -2.22
PRPF39Q86UA1 AL590004.1-201ENST00000405321 300 ntBASIC1.17□□□□□ -2.22
PRPF39Q86UA1 AC063976.4-201ENST00000421971 163 ntBASIC1.17□□□□□ -2.22
PRPF39Q86UA1 HMGN2P32-201ENST00000444648 269 ntBASIC1.17□□□□□ -2.22
PRPF39Q86UA1 AC087343.1-201ENST00000477341 475 ntBASIC1.17□□□□□ -2.22
PRPF39Q86UA1 RPL23AP54-201ENST00000495129 419 ntBASIC1.17□□□□□ -2.22
PRPF39Q86UA1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.17□□□□□ -2.22
PRPF39Q86UA1 AL133255.1-201ENST00000606374 441 ntBASIC1.17□□□□□ -2.22
PRPF39Q86UA1 JPX_2.1-201ENST00000614161 69 ntBASIC1.17□□□□□ -2.22
PRPF39Q86UA1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.17□□□□□ -2.22
PRPF39Q86UA1 Y_RNA.355-201ENST00000365462 98 ntBASIC1.16□□□□□ -2.22
PRPF39Q86UA1 RNU6-1323P-201ENST00000384025 107 ntBASIC1.16□□□□□ -2.22
PRPF39Q86UA1 Y_RNA.508-201ENST00000384502 114 ntBASIC1.16□□□□□ -2.22
PRPF39Q86UA1 MIR15B-201ENST00000385045 98 ntBASIC1.16□□□□□ -2.22
PRPF39Q86UA1 MIR802-201ENST00000390235 94 ntBASIC1.16□□□□□ -2.22
PRPF39Q86UA1 SNORD12-201ENST00000391002 90 ntBASIC1.16□□□□□ -2.22
PRPF39Q86UA1 AL591704.2-201ENST00000421658 181 ntBASIC1.16□□□□□ -2.22
PRPF39Q86UA1 MIR3145-201ENST00000580727 82 ntBASIC1.16□□□□□ -2.22
PRPF39Q86UA1 AL080274.1-201ENST00000605565 220 ntBASIC1.16□□□□□ -2.22
PRPF39Q86UA1 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.16□□□□□ -2.22
PRPF39Q86UA1 AC007485.1-201ENST00000616755 206 ntBASIC1.16□□□□□ -2.22
PRPF39Q86UA1 RNU1-124P-201ENST00000363861 145 ntBASIC1.15□□□□□ -2.23
PRPF39Q86UA1 SNORD114-22-201ENST00000365423 72 ntBASIC1.15□□□□□ -2.23
PRPF39Q86UA1 Y_RNA.368-201ENST00000365547 113 ntBASIC1.15□□□□□ -2.23
PRPF39Q86UA1 Y_RNA.431-201ENST00000384086 102 ntBASIC1.15□□□□□ -2.23
PRPF39Q86UA1 POLR2KP2-201ENST00000438155 177 ntBASIC1.15□□□□□ -2.23
PRPF39Q86UA1 OR2A41P-201ENST00000473586 105 ntBASIC1.15□□□□□ -2.23
PRPF39Q86UA1 AC117454.1-201ENST00000491120 168 ntBASIC1.15□□□□□ -2.23
PRPF39Q86UA1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.15□□□□□ -2.23
PRPF39Q86UA1 SNORD79.1-201ENST00000516069 84 ntBASIC1.15□□□□□ -2.23
PRPF39Q86UA1 SNORD116-28-201ENST00000516123 91 ntBASIC1.15□□□□□ -2.23
PRPF39Q86UA1 AP001094.1-201ENST00000579805 193 ntBASIC1.15□□□□□ -2.23
PRPF39Q86UA1 AL096861.1-201ENST00000610899 123 ntBASIC1.15□□□□□ -2.23
PRPF39Q86UA1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.15□□□□□ -2.23
PRPF39Q86UA1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
PRPF39Q86UA1 SNORD81.1-201ENST00000363064 77 ntBASIC1.14□□□□□ -2.23
PRPF39Q86UA1 SNORD14E-201ENST00000364009 85 ntBASIC1.14□□□□□ -2.23
PRPF39Q86UA1 Y_RNA.310-201ENST00000365063 113 ntBASIC1.14□□□□□ -2.23
PRPF39Q86UA1 SNORD63-201ENST00000384262 68 ntBASIC1.14□□□□□ -2.23
PRPF39Q86UA1 RNU6-475P-201ENST00000516073 104 ntBASIC1.14□□□□□ -2.23
PRPF39Q86UA1 SNORA18.7-201ENST00000516910 131 ntBASIC1.14□□□□□ -2.23
PRPF39Q86UA1 AC024405.2-202ENST00000532731 184 ntBASIC1.14□□□□□ -2.23
PRPF39Q86UA1 MIR369-201ENST00000362155 70 ntBASIC1.13□□□□□ -2.23
PRPF39Q86UA1 MIR96-201ENST00000362288 78 ntBASIC1.13□□□□□ -2.23
PRPF39Q86UA1 MIR520C-201ENST00000385005 87 ntBASIC1.13□□□□□ -2.23
PRPF39Q86UA1 MTND4LP11-201ENST00000422184 280 ntBASIC1.13□□□□□ -2.23
PRPF39Q86UA1 AC245047.8-201ENST00000456455 284 ntBASIC1.13□□□□□ -2.23
PRPF39Q86UA1 SEPT14P8-201ENST00000508026 178 ntBASIC1.13□□□□□ -2.23
PRPF39Q86UA1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
PRPF39Q86UA1 AC007742.2-201ENST00000618226 398 ntBASIC1.13□□□□□ -2.23
PRPF39Q86UA1 AC090971.5-201ENST00000621102 293 ntBASIC1.13□□□□□ -2.23
PRPF39Q86UA1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
PRPF39Q86UA1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
PRPF39Q86UA1 AC008163.1-202ENST00000636004 2889 ntBASIC1.12□□□□□ -2.23
PRPF39Q86UA1 Y_RNA.112-201ENST00000363250 102 ntBASIC1.12□□□□□ -2.23
PRPF39Q86UA1 Y_RNA.118-201ENST00000363300 101 ntBASIC1.12□□□□□ -2.23
PRPF39Q86UA1 Y_RNA.203-201ENST00000364106 102 ntBASIC1.12□□□□□ -2.23
PRPF39Q86UA1 SNORD50B-201ENST00000364995 70 ntBASIC1.12□□□□□ -2.23
PRPF39Q86UA1 Y_RNA.383-201ENST00000383855 97 ntBASIC1.12□□□□□ -2.23
PRPF39Q86UA1 RNU6-1248P-201ENST00000391096 64 ntBASIC1.12□□□□□ -2.23
PRPF39Q86UA1 MIR1302-11-201ENST00000408051 138 ntBASIC1.12□□□□□ -2.23
PRPF39Q86UA1 MIR1302-9-201ENST00000408365 138 ntBASIC1.12□□□□□ -2.23
PRPF39Q86UA1 MIR1302-10-201ENST00000408734 138 ntBASIC1.12□□□□□ -2.23
PRPF39Q86UA1 AC002429.1-201ENST00000437672 148 ntBASIC1.12□□□□□ -2.23
PRPF39Q86UA1 SNORA74.3-201ENST00000517108 154 ntBASIC1.12□□□□□ -2.23
PRPF39Q86UA1 AC090142.3-201ENST00000519012 385 ntBASIC1.12□□□□□ -2.23
PRPF39Q86UA1 AL078603.1-201ENST00000603824 313 ntBASIC1.12□□□□□ -2.23
PRPF39Q86UA1 AP003357.1-201ENST00000604497 148 ntBASIC1.12□□□□□ -2.23
PRPF39Q86UA1 MIR1302-2-201ENST00000607096 138 ntBASIC1.12□□□□□ -2.23
PRPF39Q86UA1 SNORD113-5-201ENST00000607261 78 ntBASIC1.12□□□□□ -2.23
PRPF39Q86UA1 MIR548AY-201ENST00000617669 107 ntBASIC1.12□□□□□ -2.23
PRPF39Q86UA1 uc_338.22-201ENST00000622722 187 ntBASIC1.12□□□□□ -2.23
PRPF39Q86UA1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
PRPF39Q86UA1 Y_RNA.796-201ENST00000364268 102 ntBASIC1.11□□□□□ -2.23
PRPF39Q86UA1 Y_RNA.799-201ENST00000364992 102 ntBASIC1.11□□□□□ -2.23
PRPF39Q86UA1 AC117470.1-201ENST00000381974 330 ntBASIC1.11□□□□□ -2.23
PRPF39Q86UA1 Y_RNA.445-201ENST00000384168 102 ntBASIC1.11□□□□□ -2.23
PRPF39Q86UA1 MIR19B1-201ENST00000384829 87 ntBASIC1.11□□□□□ -2.23
PRPF39Q86UA1 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.11□□□□□ -2.23
PRPF39Q86UA1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.11□□□□□ -2.23
PRPF39Q86UA1 HMGN1P10-201ENST00000474557 553 ntBASIC1.11□□□□□ -2.23
PRPF39Q86UA1 RNA5SP220-201ENST00000516298 104 ntBASIC1.11□□□□□ -2.23
PRPF39Q86UA1 RNU7-115P-201ENST00000516433 55 ntBASIC1.11□□□□□ -2.23
PRPF39Q86UA1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.11□□□□□ -2.23
PRPF39Q86UA1 AC136932.1-201ENST00000574771 208 ntBASIC1.11□□□□□ -2.23
PRPF39Q86UA1 SNORA4-201ENST00000584302 138 ntBASIC1.11□□□□□ -2.23
PRPF39Q86UA1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.11□□□□□ -2.23
PRPF39Q86UA1 AC012676.2-201ENST00000619258 186 ntBASIC1.11□□□□□ -2.23
PRPF39Q86UA1 SNORD114-27-201ENST00000363766 70 ntBASIC1.1□□□□□ -2.23
PRPF39Q86UA1 U8.7-201ENST00000364940 136 ntBASIC1.1□□□□□ -2.23
PRPF39Q86UA1 Y_RNA.363-201ENST00000365529 113 ntBASIC1.1□□□□□ -2.23
PRPF39Q86UA1 Y_RNA.419-201ENST00000384041 102 ntBASIC1.1□□□□□ -2.23
PRPF39Q86UA1 MTATP6P23-201ENST00000440153 476 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 246.8 ms