Protein–RNA interactions for Protein: Q7RTT3

SSX9, Protein SSX9, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9Q7RTT3 RPL7P42-201ENST00000481005 679 ntBASIC0.16□□□□□ -2.38
SSX9Q7RTT3 RNU4-49P-201ENST00000516080 140 ntBASIC0.16□□□□□ -2.38
SSX9Q7RTT3 RNU6-1012P-201ENST00000516606 109 ntBASIC0.16□□□□□ -2.38
SSX9Q7RTT3 MIR548AO-201ENST00000579992 96 ntBASIC0.16□□□□□ -2.38
SSX9Q7RTT3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
SSX9Q7RTT3 AC015540.1-201ENST00000615828 501 ntBASIC0.16□□□□□ -2.38
SSX9Q7RTT3 AC240442.1-201ENST00000616055 283 ntBASIC0.16□□□□□ -2.38
SSX9Q7RTT3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.15□□□□□ -2.38
SSX9Q7RTT3 Y_RNA.41-201ENST00000362646 102 ntBASIC0.15□□□□□ -2.39
SSX9Q7RTT3 Y_RNA.157-201ENST00000363638 102 ntBASIC0.15□□□□□ -2.39
SSX9Q7RTT3 RNU6-767P-201ENST00000384132 107 ntBASIC0.15□□□□□ -2.39
SSX9Q7RTT3 RNU6-205P-201ENST00000390858 107 ntBASIC0.15□□□□□ -2.39
SSX9Q7RTT3 RNU6-679P-201ENST00000391003 106 ntBASIC0.15□□□□□ -2.39
SSX9Q7RTT3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.15□□□□□ -2.39
SSX9Q7RTT3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.15□□□□□ -2.39
SSX9Q7RTT3 AC098826.2-201ENST00000452011 651 ntBASIC0.15□□□□□ -2.39
SSX9Q7RTT3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.15□□□□□ -2.39
SSX9Q7RTT3 SNORA25.12-201ENST00000516202 82 ntBASIC0.15□□□□□ -2.39
SSX9Q7RTT3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.15□□□□□ -2.39
SSX9Q7RTT3 RN7SL793P-201ENST00000583259 296 ntBASIC0.15□□□□□ -2.39
SSX9Q7RTT3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.15□□□□□ -2.39
SSX9Q7RTT3 AC092794.2-201ENST00000620933 563 ntBASIC0.15□□□□□ -2.39
SSX9Q7RTT3 SNORD45.3-201ENST00000363836 72 ntBASIC0.14□□□□□ -2.39
SSX9Q7RTT3 SNORA51.10-201ENST00000384418 136 ntBASIC0.14□□□□□ -2.39
SSX9Q7RTT3 RNY1P4-201ENST00000384595 115 ntBASIC0.14□□□□□ -2.39
SSX9Q7RTT3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
SSX9Q7RTT3 MTND1P29-201ENST00000448112 647 ntBASIC0.14□□□□□ -2.39
SSX9Q7RTT3 MIR2053-201ENST00000459295 91 ntBASIC0.14□□□□□ -2.39
SSX9Q7RTT3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.14□□□□□ -2.39
SSX9Q7RTT3 MIR2355-201ENST00000517199 87 ntBASIC0.14□□□□□ -2.39
SSX9Q7RTT3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.14□□□□□ -2.39
SSX9Q7RTT3 MIR4771-2-201ENST00000577758 74 ntBASIC0.14□□□□□ -2.39
SSX9Q7RTT3 MIR4771-1-201ENST00000582617 74 ntBASIC0.14□□□□□ -2.39
SSX9Q7RTT3 AC011712.1-201ENST00000588959 234 ntBASIC0.14□□□□□ -2.39
SSX9Q7RTT3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.14□□□□□ -2.39
SSX9Q7RTT3 Y_RNA.9-201ENST00000362354 101 ntBASIC0.13□□□□□ -2.39
SSX9Q7RTT3 RNY4P14-201ENST00000363656 96 ntBASIC0.13□□□□□ -2.39
SSX9Q7RTT3 Y_RNA.393-201ENST00000383936 102 ntBASIC0.13□□□□□ -2.39
SSX9Q7RTT3 Y_RNA.517-201ENST00000384551 106 ntBASIC0.13□□□□□ -2.39
SSX9Q7RTT3 MIR802-201ENST00000390235 94 ntBASIC0.13□□□□□ -2.39
SSX9Q7RTT3 MTCO2P33-201ENST00000402100 465 ntBASIC0.13□□□□□ -2.39
SSX9Q7RTT3 RNU2-70P-201ENST00000410718 179 ntBASIC0.13□□□□□ -2.39
SSX9Q7RTT3 RPS3AP52-201ENST00000435639 297 ntBASIC0.13□□□□□ -2.39
SSX9Q7RTT3 SNRPGP12-201ENST00000449481 213 ntBASIC0.13□□□□□ -2.39
SSX9Q7RTT3 HMGN1P10-201ENST00000474557 553 ntBASIC0.13□□□□□ -2.39
SSX9Q7RTT3 AC011352.1-201ENST00000512300 793 ntBASIC0.13□□□□□ -2.39
SSX9Q7RTT3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.13□□□□□ -2.39
SSX9Q7RTT3 RNU6-155P-201ENST00000516347 100 ntBASIC0.13□□□□□ -2.39
SSX9Q7RTT3 Y_RNA.708-201ENST00000516950 96 ntBASIC0.13□□□□□ -2.39
SSX9Q7RTT3 AC022523.2-201ENST00000561045 150 ntBASIC0.13□□□□□ -2.39
SSX9Q7RTT3 AP000753.3-201ENST00000604083 169 ntBASIC0.13□□□□□ -2.39
SSX9Q7RTT3 AC103591.3-201ENST00000608684 209 ntBASIC0.13□□□□□ -2.39
SSX9Q7RTT3 Pinc.1-201ENST00000616452 154 ntBASIC0.13□□□□□ -2.39
SSX9Q7RTT3 PVT1_3.1-201ENST00000620853 95 ntBASIC0.13□□□□□ -2.39
SSX9Q7RTT3 Y_RNA.89-201ENST00000363031 102 ntBASIC0.12□□□□□ -2.39
SSX9Q7RTT3 SNORD44.1-201ENST00000363202 61 ntBASIC0.12□□□□□ -2.39
SSX9Q7RTT3 RNU6-593P-201ENST00000364716 112 ntBASIC0.12□□□□□ -2.39
SSX9Q7RTT3 RNU6-580P-201ENST00000365159 107 ntBASIC0.12□□□□□ -2.39
SSX9Q7RTT3 RNU6-442P-201ENST00000383968 104 ntBASIC0.12□□□□□ -2.39
SSX9Q7RTT3 MIR181A1-201ENST00000385026 110 ntBASIC0.12□□□□□ -2.39
SSX9Q7RTT3 MT-TN-201ENST00000387400 73 ntBASIC0.12□□□□□ -2.39
SSX9Q7RTT3 RNU6-192P-201ENST00000391253 100 ntBASIC0.12□□□□□ -2.39
SSX9Q7RTT3 U8.17-201ENST00000391292 132 ntBASIC0.12□□□□□ -2.39
SSX9Q7RTT3 MIR548F5-201ENST00000408421 86 ntBASIC0.12□□□□□ -2.39
SSX9Q7RTT3 RNA5SP118-201ENST00000410385 109 ntBASIC0.12□□□□□ -2.39
SSX9Q7RTT3 MTND3P21-201ENST00000433774 331 ntBASIC0.12□□□□□ -2.39
SSX9Q7RTT3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.12□□□□□ -2.39
SSX9Q7RTT3 AC116353.2-201ENST00000505332 712 ntBASIC0.12□□□□□ -2.39
SSX9Q7RTT3 SNORA62.5-201ENST00000516634 120 ntBASIC0.12□□□□□ -2.39
SSX9Q7RTT3 AC026407.1-201ENST00000518369 204 ntBASIC0.12□□□□□ -2.39
SSX9Q7RTT3 MIR4804-201ENST00000581683 73 ntBASIC0.12□□□□□ -2.39
SSX9Q7RTT3 MTND1P7-201ENST00000632801 297 ntBASIC0.12□□□□□ -2.39
SSX9Q7RTT3 MIR924-201ENST00000638017 53 ntBASIC0.12□□□□□ -2.39
SSX9Q7RTT3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.12□□□□□ -2.39
SSX9Q7RTT3 MIR377-201ENST00000362145 69 ntBASIC0.11□□□□□ -2.39
SSX9Q7RTT3 RNA5SP62-201ENST00000363457 110 ntBASIC0.11□□□□□ -2.39
SSX9Q7RTT3 RNA5SP517-201ENST00000364724 117 ntBASIC0.11□□□□□ -2.39
SSX9Q7RTT3 RNU6-601P-201ENST00000384540 107 ntBASIC0.11□□□□□ -2.39
SSX9Q7RTT3 MIR193B-201ENST00000384907 83 ntBASIC0.11□□□□□ -2.39
SSX9Q7RTT3 MIR489-201ENST00000384923 84 ntBASIC0.11□□□□□ -2.39
SSX9Q7RTT3 MIR518A1-201ENST00000385068 85 ntBASIC0.11□□□□□ -2.39
SSX9Q7RTT3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
SSX9Q7RTT3 MTND3P10-201ENST00000450967 341 ntBASIC0.11□□□□□ -2.39
SSX9Q7RTT3 RPL17P19-201ENST00000489069 552 ntBASIC0.11□□□□□ -2.39
SSX9Q7RTT3 RNU6-436P-201ENST00000516171 114 ntBASIC0.11□□□□□ -2.39
SSX9Q7RTT3 RNU7-181P-201ENST00000517234 74 ntBASIC0.11□□□□□ -2.39
SSX9Q7RTT3 AC005899.2-201ENST00000584353 90 ntBASIC0.11□□□□□ -2.39
SSX9Q7RTT3 AC005176.2-201ENST00000596933 147 ntBASIC0.11□□□□□ -2.39
SSX9Q7RTT3 RBM11P1-201ENST00000604951 799 ntBASIC0.11□□□□□ -2.39
SSX9Q7RTT3 MIR4791-201ENST00000607666 84 ntBASIC0.11□□□□□ -2.39
SSX9Q7RTT3 RNU6-99P-201ENST00000364721 107 ntBASIC0.1□□□□□ -2.39
SSX9Q7RTT3 Y_RNA.295-201ENST00000364918 102 ntBASIC0.1□□□□□ -2.39
SSX9Q7RTT3 Y_RNA.404-201ENST00000383978 102 ntBASIC0.1□□□□□ -2.39
SSX9Q7RTT3 Y_RNA.446-201ENST00000384178 104 ntBASIC0.1□□□□□ -2.39
SSX9Q7RTT3 Y_RNA.537-201ENST00000384626 109 ntBASIC0.1□□□□□ -2.39
SSX9Q7RTT3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.1□□□□□ -2.39
SSX9Q7RTT3 SNORA40.8-201ENST00000411034 126 ntBASIC0.1□□□□□ -2.39
SSX9Q7RTT3 RNU6-1199P-201ENST00000411249 104 ntBASIC0.1□□□□□ -2.39
SSX9Q7RTT3 SNORD71-201ENST00000411292 86 ntBASIC0.1□□□□□ -2.39
SSX9Q7RTT3 MTND4P28-201ENST00000426217 387 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms