Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RPS27P16-201ENST00000425758 201 ntBASIC1.37□□□□□ -2.19
CX3CL1P78423 MTCYBP9-201ENST00000431021 303 ntBASIC1.37□□□□□ -2.19
CX3CL1P78423 SNRPGP10-201ENST00000432323 225 ntBASIC1.37□□□□□ -2.19
CX3CL1P78423 AC027119.1-201ENST00000440877 241 ntBASIC1.37□□□□□ -2.19
CX3CL1P78423 RNU6-437P-201ENST00000459408 95 ntBASIC1.37□□□□□ -2.19
CX3CL1P78423 AC092991.1-201ENST00000477176 376 ntBASIC1.37□□□□□ -2.19
CX3CL1P78423 RNA5SP445-201ENST00000515889 115 ntBASIC1.37□□□□□ -2.19
CX3CL1P78423 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.37□□□□□ -2.19
CX3CL1P78423 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.37□□□□□ -2.19
CX3CL1P78423 MIR6845-201ENST00000613182 61 ntBASIC1.37□□□□□ -2.19
CX3CL1P78423 U6.104-201ENST00000637979 90 ntBASIC1.37□□□□□ -2.19
CX3CL1P78423 AC068700.1-201ENST00000565862 3754 ntBASIC1.37□□□□□ -2.19
CX3CL1P78423 RNU6-199P-201ENST00000362954 107 ntBASIC1.36□□□□□ -2.19
CX3CL1P78423 Y_RNA.275-201ENST00000364726 110 ntBASIC1.36□□□□□ -2.19
CX3CL1P78423 RNU6-163P-201ENST00000384396 106 ntBASIC1.36□□□□□ -2.19
CX3CL1P78423 MIR568-201ENST00000385036 95 ntBASIC1.36□□□□□ -2.19
CX3CL1P78423 SNORA26.9-201ENST00000391322 122 ntBASIC1.36□□□□□ -2.19
CX3CL1P78423 MLLT10P1-201ENST00000418346 262 ntBASIC1.36□□□□□ -2.19
CX3CL1P78423 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.36□□□□□ -2.19
CX3CL1P78423 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.36□□□□□ -2.19
CX3CL1P78423 AC245517.4-201ENST00000448601 281 ntBASIC1.36□□□□□ -2.19
CX3CL1P78423 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.36□□□□□ -2.19
CX3CL1P78423 MIR3937-201ENST00000580135 106 ntBASIC1.36□□□□□ -2.19
CX3CL1P78423 AL008718.3-201ENST00000610217 321 ntBASIC1.36□□□□□ -2.19
CX3CL1P78423 U2.14-201ENST00000615943 113 ntBASIC1.36□□□□□ -2.19
CX3CL1P78423 AC013791.1-201ENST00000616619 62 ntBASIC1.36□□□□□ -2.19
CX3CL1P78423 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.35□□□□□ -2.19
CX3CL1P78423 MIR335-201ENST00000362173 94 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 Y_RNA.44-201ENST00000362676 108 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 SNORD33-201ENST00000362761 85 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 RNU6-833P-201ENST00000363486 107 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 RNU6-1205P-201ENST00000363625 106 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 RNU6-674P-201ENST00000363831 107 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 RNU6-457P-201ENST00000363999 107 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 Y_RNA.796-201ENST00000364268 102 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 Y_RNA.799-201ENST00000364992 102 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 RNA5SP363-201ENST00000365072 115 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 RNU6-969P-201ENST00000383900 105 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 RNU6-131P-201ENST00000391144 107 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 MIR891A-201ENST00000401237 79 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 MIR1278-201ENST00000408753 81 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.35□□□□□ -2.19
CX3CL1P78423 AC114811.1-201ENST00000507207 168 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 RNU6-250P-201ENST00000516958 103 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 MIR8081-201ENST00000611533 95 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 AC027279.3-201ENST00000625055 122 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 snoU18.1-201ENST00000629629 71 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CX3CL1P78423 WWP1P1-201ENST00000466609 2769 ntBASIC1.35□□□□□ -2.19
CX3CL1P78423 RNU6-1209P-201ENST00000363655 107 ntBASIC1.34□□□□□ -2.19
CX3CL1P78423 RNU6-1289P-201ENST00000384431 106 ntBASIC1.34□□□□□ -2.19
CX3CL1P78423 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.34□□□□□ -2.19
CX3CL1P78423 SNX2P2-201ENST00000424553 323 ntBASIC1.34□□□□□ -2.19
CX3CL1P78423 MIR5692C2-201ENST00000577959 77 ntBASIC1.34□□□□□ -2.19
CX3CL1P78423 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.34□□□□□ -2.19
CX3CL1P78423 JPX_2.1-201ENST00000614161 69 ntBASIC1.34□□□□□ -2.19
CX3CL1P78423 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.34□□□□□ -2.2
CX3CL1P78423 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.33□□□□□ -2.2
CX3CL1P78423 Y_RNA.117-201ENST00000363294 101 ntBASIC1.33□□□□□ -2.2
CX3CL1P78423 RNU6-740P-201ENST00000364734 105 ntBASIC1.33□□□□□ -2.2
CX3CL1P78423 RNU6-1065P-201ENST00000384513 106 ntBASIC1.33□□□□□ -2.2
CX3CL1P78423 RNU6-997P-201ENST00000384725 107 ntBASIC1.33□□□□□ -2.2
CX3CL1P78423 RN7SKP51-201ENST00000410781 304 ntBASIC1.33□□□□□ -2.2
CX3CL1P78423 RPL39P38-201ENST00000467018 153 ntBASIC1.33□□□□□ -2.2
CX3CL1P78423 NDUFA4P2-201ENST00000489989 244 ntBASIC1.33□□□□□ -2.2
CX3CL1P78423 RNU6-917P-201ENST00000516294 104 ntBASIC1.33□□□□□ -2.2
CX3CL1P78423 SNORA25.15-201ENST00000516487 89 ntBASIC1.33□□□□□ -2.2
CX3CL1P78423 RNU6-902P-201ENST00000517212 91 ntBASIC1.33□□□□□ -2.2
CX3CL1P78423 MIR502-201ENST00000606349 86 ntBASIC1.33□□□□□ -2.2
CX3CL1P78423 RNU6-144P-201ENST00000383951 107 ntBASIC1.32□□□□□ -2.2
CX3CL1P78423 RNU6-211P-201ENST00000384047 107 ntBASIC1.32□□□□□ -2.2
CX3CL1P78423 MIR526A1-201ENST00000384897 85 ntBASIC1.32□□□□□ -2.2
CX3CL1P78423 AL627390.1-201ENST00000396055 340 ntBASIC1.32□□□□□ -2.2
CX3CL1P78423 RNU2-38P-201ENST00000410856 79 ntBASIC1.32□□□□□ -2.2
CX3CL1P78423 MTND3P2-201ENST00000438452 342 ntBASIC1.32□□□□□ -2.2
CX3CL1P78423 SNORD45.4-201ENST00000516629 73 ntBASIC1.32□□□□□ -2.2
CX3CL1P78423 Y_RNA.714-201ENST00000517065 90 ntBASIC1.32□□□□□ -2.2
CX3CL1P78423 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.32□□□□□ -2.2
CX3CL1P78423 RPL23AP91-201ENST00000569211 455 ntBASIC1.32□□□□□ -2.2
CX3CL1P78423 MIR2681-201ENST00000581814 105 ntBASIC1.32□□□□□ -2.2
CX3CL1P78423 RNU6-1084P-201ENST00000362498 107 ntBASIC1.31□□□□□ -2.2
CX3CL1P78423 Y_RNA.293-201ENST00000364908 93 ntBASIC1.31□□□□□ -2.2
CX3CL1P78423 SNORD50B-201ENST00000364995 70 ntBASIC1.31□□□□□ -2.2
CX3CL1P78423 snoU2-30.1-201ENST00000365012 70 ntBASIC1.31□□□□□ -2.2
CX3CL1P78423 MIR653-201ENST00000385279 96 ntBASIC1.31□□□□□ -2.2
CX3CL1P78423 MIR1302-3-201ENST00000408128 138 ntBASIC1.31□□□□□ -2.2
CX3CL1P78423 RNU6-383P-201ENST00000410864 94 ntBASIC1.31□□□□□ -2.2
CX3CL1P78423 RNU6-651P-201ENST00000411040 105 ntBASIC1.31□□□□□ -2.2
CX3CL1P78423 CYCSP49-201ENST00000420810 319 ntBASIC1.31□□□□□ -2.2
CX3CL1P78423 SNORD11-201ENST00000459124 84 ntBASIC1.31□□□□□ -2.2
CX3CL1P78423 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.31□□□□□ -2.2
CX3CL1P78423 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.31□□□□□ -2.2
CX3CL1P78423 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.31□□□□□ -2.2
CX3CL1P78423 RNU6-970P-201ENST00000516312 107 ntBASIC1.31□□□□□ -2.2
CX3CL1P78423 RNU6-922P-201ENST00000516753 99 ntBASIC1.31□□□□□ -2.2
CX3CL1P78423 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CX3CL1P78423 AC012433.1-201ENST00000588916 398 ntBASIC1.31□□□□□ -2.2
CX3CL1P78423 AP001485.1-201ENST00000604799 199 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms