Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 MIR1302-7-201ENST00000408841 72 ntBASIC0.64□□□□□ -2.31
PKNOX1P55347 RPS26P5-201ENST00000418544 335 ntBASIC0.64□□□□□ -2.31
PKNOX1P55347 AF228730.4-201ENST00000421457 183 ntBASIC0.64□□□□□ -2.31
PKNOX1P55347 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.64□□□□□ -2.31
PKNOX1P55347 U8.19-201ENST00000459095 133 ntBASIC0.64□□□□□ -2.31
PKNOX1P55347 AC084781.2-201ENST00000615568 161 ntBASIC0.64□□□□□ -2.31
PKNOX1P55347 AC010205.1-201ENST00000616668 449 ntBASIC0.64□□□□□ -2.31
PKNOX1P55347 MIR6835-201ENST00000621552 64 ntBASIC0.64□□□□□ -2.31
PKNOX1P55347 MIR337-201ENST00000362281 93 ntBASIC0.63□□□□□ -2.31
PKNOX1P55347 RNY1P10-201ENST00000363268 113 ntBASIC0.63□□□□□ -2.31
PKNOX1P55347 Y_RNA.341-201ENST00000365341 102 ntBASIC0.63□□□□□ -2.31
PKNOX1P55347 Y_RNA.496-201ENST00000384444 101 ntBASIC0.63□□□□□ -2.31
PKNOX1P55347 RNU6-710P-201ENST00000410424 105 ntBASIC0.63□□□□□ -2.31
PKNOX1P55347 MTCO2P27-201ENST00000420740 428 ntBASIC0.63□□□□□ -2.31
PKNOX1P55347 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.63□□□□□ -2.31
PKNOX1P55347 AL392103.1-201ENST00000447000 198 ntBASIC0.63□□□□□ -2.31
PKNOX1P55347 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.63□□□□□ -2.31
PKNOX1P55347 RNU6-237P-201ENST00000515985 71 ntBASIC0.63□□□□□ -2.31
PKNOX1P55347 DEFB117-201ENST00000602356 141 ntBASIC0.63□□□□□ -2.31
PKNOX1P55347 AL590095.2-201ENST00000604136 117 ntBASIC0.63□□□□□ -2.31
PKNOX1P55347 AL132765.2-201ENST00000610812 351 ntBASIC0.63□□□□□ -2.31
PKNOX1P55347 AC091925.1-201ENST00000623204 462 ntBASIC0.63□□□□□ -2.31
PKNOX1P55347 MIR1302-1-201ENST00000637932 143 ntBASIC0.63□□□□□ -2.31
PKNOX1P55347 AC134026.1-201ENST00000623249 2239 ntBASIC0.62□□□□□ -2.31
PKNOX1P55347 AC023934.1-201ENST00000574529 2389 ntBASIC0.62□□□□□ -2.31
PKNOX1P55347 RNU6-1115P-201ENST00000362490 106 ntBASIC0.62□□□□□ -2.31
PKNOX1P55347 RNU6-1283P-201ENST00000365314 105 ntBASIC0.62□□□□□ -2.31
PKNOX1P55347 Y_RNA.456-201ENST00000384232 111 ntBASIC0.62□□□□□ -2.31
PKNOX1P55347 RNU6-110P-201ENST00000384508 104 ntBASIC0.62□□□□□ -2.31
PKNOX1P55347 SNORD28B-201ENST00000390993 75 ntBASIC0.62□□□□□ -2.31
PKNOX1P55347 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.62□□□□□ -2.31
PKNOX1P55347 AL603825.1-201ENST00000438481 80 ntBASIC0.62□□□□□ -2.31
PKNOX1P55347 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.62□□□□□ -2.31
PKNOX1P55347 AC036111.3-201ENST00000526389 112 ntBASIC0.62□□□□□ -2.31
PKNOX1P55347 AC024405.2-202ENST00000532731 184 ntBASIC0.62□□□□□ -2.31
PKNOX1P55347 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.62□□□□□ -2.31
PKNOX1P55347 MIR3124-201ENST00000582636 67 ntBASIC0.62□□□□□ -2.31
PKNOX1P55347 POLR3GP1-201ENST00000594073 261 ntBASIC0.62□□□□□ -2.31
PKNOX1P55347 AP003357.1-201ENST00000604497 148 ntBASIC0.62□□□□□ -2.31
PKNOX1P55347 RNU6-94P-201ENST00000607728 107 ntBASIC0.62□□□□□ -2.31
PKNOX1P55347 AC104985.2-201ENST00000620598 500 ntBASIC0.62□□□□□ -2.31
PKNOX1P55347 Y_RNA.203-201ENST00000364106 102 ntBASIC0.61□□□□□ -2.31
PKNOX1P55347 RNU6-654P-201ENST00000364373 107 ntBASIC0.61□□□□□ -2.31
PKNOX1P55347 Y_RNA.331-201ENST00000365267 102 ntBASIC0.61□□□□□ -2.31
PKNOX1P55347 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.61□□□□□ -2.31
PKNOX1P55347 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
PKNOX1P55347 SNRPGP14-201ENST00000435400 219 ntBASIC0.61□□□□□ -2.31
PKNOX1P55347 RNU7-152P-201ENST00000458982 64 ntBASIC0.61□□□□□ -2.31
PKNOX1P55347 RNU6-1053P-201ENST00000515930 101 ntBASIC0.61□□□□□ -2.31
PKNOX1P55347 RNA5SP102-201ENST00000516865 106 ntBASIC0.61□□□□□ -2.31
PKNOX1P55347 RNU7-116P-201ENST00000516940 62 ntBASIC0.61□□□□□ -2.31
PKNOX1P55347 DEFB108E-201ENST00000524692 240 ntBASIC0.61□□□□□ -2.31
PKNOX1P55347 AP003484.1-201ENST00000530974 250 ntBASIC0.61□□□□□ -2.31
PKNOX1P55347 AC004817.2-201ENST00000561794 651 ntBASIC0.61□□□□□ -2.31
PKNOX1P55347 MIR548AR-201ENST00000582191 57 ntBASIC0.61□□□□□ -2.31
PKNOX1P55347 AC104465.1-201ENST00000611365 139 ntBASIC0.61□□□□□ -2.31
PKNOX1P55347 AC008133.2-201ENST00000624540 351 ntBASIC0.61□□□□□ -2.31
PKNOX1P55347 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.61□□□□□ -2.31
PKNOX1P55347 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
PKNOX1P55347 MIR96-201ENST00000362288 78 ntBASIC0.6□□□□□ -2.31
PKNOX1P55347 Y_RNA.148-201ENST00000363557 117 ntBASIC0.6□□□□□ -2.31
PKNOX1P55347 SNORD14E-201ENST00000364009 85 ntBASIC0.6□□□□□ -2.31
PKNOX1P55347 U8.7-201ENST00000364940 136 ntBASIC0.6□□□□□ -2.31
PKNOX1P55347 Y_RNA.428-201ENST00000384078 102 ntBASIC0.6□□□□□ -2.31
PKNOX1P55347 Y_RNA.458-201ENST00000384240 102 ntBASIC0.6□□□□□ -2.31
PKNOX1P55347 Y_RNA.462-201ENST00000384268 102 ntBASIC0.6□□□□□ -2.31
PKNOX1P55347 SNORD89-201ENST00000390981 114 ntBASIC0.6□□□□□ -2.31
PKNOX1P55347 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.6□□□□□ -2.31
PKNOX1P55347 U7.7-201ENST00000459276 60 ntBASIC0.6□□□□□ -2.31
PKNOX1P55347 NDUFA4P2-201ENST00000489989 244 ntBASIC0.6□□□□□ -2.31
PKNOX1P55347 AC113410.1-201ENST00000505029 247 ntBASIC0.6□□□□□ -2.31
PKNOX1P55347 Y_RNA.714-201ENST00000517065 90 ntBASIC0.6□□□□□ -2.31
PKNOX1P55347 SNORD116.3-201ENST00000517176 78 ntBASIC0.6□□□□□ -2.31
PKNOX1P55347 AC127455.1-201ENST00000565496 145 ntBASIC0.6□□□□□ -2.31
PKNOX1P55347 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.6□□□□□ -2.31
PKNOX1P55347 MIR3145-201ENST00000580727 82 ntBASIC0.6□□□□□ -2.31
PKNOX1P55347 AC005730.3-201ENST00000583067 366 ntBASIC0.6□□□□□ -2.31
PKNOX1P55347 MIR5188-201ENST00000583467 113 ntBASIC0.6□□□□□ -2.31
PKNOX1P55347 MIR4251-201ENST00000635819 61 ntBASIC0.6□□□□□ -2.31
PKNOX1P55347 Y_RNA.796-201ENST00000364268 102 ntBASIC0.59□□□□□ -2.31
PKNOX1P55347 RNU1-93P-201ENST00000364704 169 ntBASIC0.59□□□□□ -2.31
PKNOX1P55347 Y_RNA.799-201ENST00000364992 102 ntBASIC0.59□□□□□ -2.31
PKNOX1P55347 Y_RNA.384-201ENST00000383909 102 ntBASIC0.59□□□□□ -2.31
PKNOX1P55347 Y_RNA.632-201ENST00000459189 102 ntBASIC0.59□□□□□ -2.31
PKNOX1P55347 AC010655.3-201ENST00000478818 450 ntBASIC0.59□□□□□ -2.31
PKNOX1P55347 COX6CP6-201ENST00000490840 228 ntBASIC0.59□□□□□ -2.31
PKNOX1P55347 RNU7-115P-201ENST00000516433 55 ntBASIC0.59□□□□□ -2.31
PKNOX1P55347 RNU4-77P-201ENST00000516692 156 ntBASIC0.59□□□□□ -2.31
PKNOX1P55347 RNU11-2P-201ENST00000516898 142 ntBASIC0.59□□□□□ -2.31
PKNOX1P55347 UBE2V2P2-201ENST00000587677 504 ntBASIC0.59□□□□□ -2.31
PKNOX1P55347 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.59□□□□□ -2.31
PKNOX1P55347 MIR6516-201ENST00000630554 81 ntBASIC0.59□□□□□ -2.31
PKNOX1P55347 RNU6-1209P-201ENST00000363655 107 ntBASIC0.58□□□□□ -2.32
PKNOX1P55347 Y_RNA.187-201ENST00000363918 113 ntBASIC0.58□□□□□ -2.32
PKNOX1P55347 MIR508-201ENST00000384857 115 ntBASIC0.58□□□□□ -2.32
PKNOX1P55347 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
PKNOX1P55347 SNORD99-201ENST00000408612 74 ntBASIC0.58□□□□□ -2.32
PKNOX1P55347 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.58□□□□□ -2.32
PKNOX1P55347 HMGN1P10-201ENST00000474557 553 ntBASIC0.58□□□□□ -2.32
PKNOX1P55347 AC098869.1-201ENST00000481627 292 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms