Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.11□□□□□ -2.23
VCPP55072 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.11□□□□□ -2.23
VCPP55072 AC093850.1-201ENST00000454121 251 ntBASIC1.11□□□□□ -2.23
VCPP55072 RNA5SP121-201ENST00000516537 101 ntBASIC1.11□□□□□ -2.23
VCPP55072 MIR3973-201ENST00000579824 107 ntBASIC1.11□□□□□ -2.23
VCPP55072 MIR4423-201ENST00000580922 80 ntBASIC1.11□□□□□ -2.23
VCPP55072 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.11□□□□□ -2.23
VCPP55072 AL080274.1-201ENST00000605565 220 ntBASIC1.11□□□□□ -2.23
VCPP55072 AC006157.1-201ENST00000611750 366 ntBASIC1.11□□□□□ -2.23
VCPP55072 AL109933.3-201ENST00000619095 188 ntBASIC1.11□□□□□ -2.23
VCPP55072 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
VCPP55072 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
VCPP55072 Y_RNA.329-201ENST00000365209 107 ntBASIC1.1□□□□□ -2.23
VCPP55072 Y_RNA.462-201ENST00000384268 102 ntBASIC1.1□□□□□ -2.23
VCPP55072 MIR653-201ENST00000385279 96 ntBASIC1.1□□□□□ -2.23
VCPP55072 Y_RNA.621-201ENST00000411065 96 ntBASIC1.1□□□□□ -2.23
VCPP55072 AC022028.1-201ENST00000412054 408 ntBASIC1.1□□□□□ -2.23
VCPP55072 AL390729.2-201ENST00000416137 156 ntBASIC1.1□□□□□ -2.23
VCPP55072 MCFD2P1-201ENST00000417812 300 ntBASIC1.1□□□□□ -2.23
VCPP55072 MTND1P14-201ENST00000427400 950 ntBASIC1.1□□□□□ -2.23
VCPP55072 DYNLT3P2-201ENST00000442517 295 ntBASIC1.1□□□□□ -2.23
VCPP55072 AC005042.3-201ENST00000453230 174 ntBASIC1.1□□□□□ -2.23
VCPP55072 RNU6-1170P-201ENST00000515974 106 ntBASIC1.1□□□□□ -2.23
VCPP55072 RNU6-922P-201ENST00000516753 99 ntBASIC1.1□□□□□ -2.23
VCPP55072 RNA5SP330-201ENST00000517096 96 ntBASIC1.1□□□□□ -2.23
VCPP55072 SNORD114-21-201ENST00000606412 72 ntBASIC1.1□□□□□ -2.23
VCPP55072 AC004832.4-201ENST00000608952 331 ntBASIC1.1□□□□□ -2.23
VCPP55072 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.1□□□□□ -2.23
VCPP55072 SNORA25-201ENST00000384384 134 ntBASIC1.09□□□□□ -2.23
VCPP55072 Y_RNA.526-201ENST00000384572 110 ntBASIC1.09□□□□□ -2.23
VCPP55072 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.09□□□□□ -2.23
VCPP55072 RNU6-165P-201ENST00000517170 99 ntBASIC1.09□□□□□ -2.23
VCPP55072 AC090049.2-201ENST00000550377 109 ntBASIC1.09□□□□□ -2.23
VCPP55072 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.09□□□□□ -2.23
VCPP55072 BX284668.6-201ENST00000606899 438 ntBASIC1.09□□□□□ -2.23
VCPP55072 uc_338.22-201ENST00000622722 187 ntBASIC1.09□□□□□ -2.23
VCPP55072 AL008636.1-201ENST00000625038 1018 ntBASIC1.09□□□□□ -2.23
VCPP55072 AC068647.2-201ENST00000637380 353 ntBASIC1.09□□□□□ -2.23
VCPP55072 SNORA2.2-201ENST00000365473 135 ntBASIC1.08□□□□□ -2.24
VCPP55072 SNORA22-201ENST00000383907 134 ntBASIC1.08□□□□□ -2.24
VCPP55072 Y_RNA.395-201ENST00000383945 109 ntBASIC1.08□□□□□ -2.24
VCPP55072 Y_RNA.419-201ENST00000384041 102 ntBASIC1.08□□□□□ -2.24
VCPP55072 Y_RNA.431-201ENST00000384086 102 ntBASIC1.08□□□□□ -2.24
VCPP55072 SNORA22C-201ENST00000384614 134 ntBASIC1.08□□□□□ -2.24
VCPP55072 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.08□□□□□ -2.24
VCPP55072 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.08□□□□□ -2.24
VCPP55072 RNU6-917P-201ENST00000516294 104 ntBASIC1.08□□□□□ -2.24
VCPP55072 RNU6-1116P-201ENST00000517269 99 ntBASIC1.08□□□□□ -2.24
VCPP55072 AC005972.2-201ENST00000604690 348 ntBASIC1.08□□□□□ -2.24
VCPP55072 GHRLOS.1-201ENST00000610995 70 ntBASIC1.08□□□□□ -2.24
VCPP55072 AC007485.1-201ENST00000616755 206 ntBASIC1.08□□□□□ -2.24
VCPP55072 AC027335.2-201ENST00000624030 375 ntBASIC1.08□□□□□ -2.24
VCPP55072 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
VCPP55072 SNORD68-201ENST00000363214 84 ntBASIC1.07□□□□□ -2.24
VCPP55072 Y_RNA.258-201ENST00000364613 105 ntBASIC1.07□□□□□ -2.24
VCPP55072 Y_RNA.331-201ENST00000365267 102 ntBASIC1.07□□□□□ -2.24
VCPP55072 Y_RNA.439-201ENST00000384119 94 ntBASIC1.07□□□□□ -2.24
VCPP55072 RNU6-710P-201ENST00000410424 105 ntBASIC1.07□□□□□ -2.24
VCPP55072 RPS20P10-201ENST00000451209 253 ntBASIC1.07□□□□□ -2.24
VCPP55072 U8.20-201ENST00000459445 131 ntBASIC1.07□□□□□ -2.24
VCPP55072 RNU6-322P-201ENST00000516010 103 ntBASIC1.07□□□□□ -2.24
VCPP55072 RNU6-475P-201ENST00000516073 104 ntBASIC1.07□□□□□ -2.24
VCPP55072 Y_RNA.713-201ENST00000517013 96 ntBASIC1.07□□□□□ -2.24
VCPP55072 AC022616.4-201ENST00000522985 181 ntBASIC1.07□□□□□ -2.24
VCPP55072 AC040926.1-201ENST00000530195 238 ntBASIC1.07□□□□□ -2.24
VCPP55072 MIR4714-201ENST00000580728 77 ntBASIC1.07□□□□□ -2.24
VCPP55072 AL022345.2-201ENST00000606307 135 ntBASIC1.07□□□□□ -2.24
VCPP55072 AC011373.1-201ENST00000607270 237 ntBASIC1.07□□□□□ -2.24
VCPP55072 AL591926.4-201ENST00000616895 298 ntBASIC1.07□□□□□ -2.24
VCPP55072 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
VCPP55072 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
VCPP55072 MIR369-201ENST00000362155 70 ntBASIC1.06□□□□□ -2.24
VCPP55072 SNORD81.1-201ENST00000363064 77 ntBASIC1.06□□□□□ -2.24
VCPP55072 RNU6-833P-201ENST00000363486 107 ntBASIC1.06□□□□□ -2.24
VCPP55072 RNU4-50P-201ENST00000364361 141 ntBASIC1.06□□□□□ -2.24
VCPP55072 SNORD42.2-201ENST00000365570 69 ntBASIC1.06□□□□□ -2.24
VCPP55072 SNORD14.1-201ENST00000365609 90 ntBASIC1.06□□□□□ -2.24
VCPP55072 SNORD63-201ENST00000384262 68 ntBASIC1.06□□□□□ -2.24
VCPP55072 Y_RNA.509-201ENST00000384506 99 ntBASIC1.06□□□□□ -2.24
VCPP55072 RNU6-35P-201ENST00000384530 107 ntBASIC1.06□□□□□ -2.24
VCPP55072 SNORD41-201ENST00000386967 70 ntBASIC1.06□□□□□ -2.24
VCPP55072 MIR891A-201ENST00000401237 79 ntBASIC1.06□□□□□ -2.24
VCPP55072 AL451046.2-201ENST00000403074 277 ntBASIC1.06□□□□□ -2.24
VCPP55072 MIR1302-11-201ENST00000408051 138 ntBASIC1.06□□□□□ -2.24
VCPP55072 MIR1302-9-201ENST00000408365 138 ntBASIC1.06□□□□□ -2.24
VCPP55072 MIR1302-10-201ENST00000408734 138 ntBASIC1.06□□□□□ -2.24
VCPP55072 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
VCPP55072 CYCTP-201ENST00000504253 315 ntBASIC1.06□□□□□ -2.24
VCPP55072 SNORA25.10-201ENST00000515926 124 ntBASIC1.06□□□□□ -2.24
VCPP55072 RNU7-110P-201ENST00000516891 62 ntBASIC1.06□□□□□ -2.24
VCPP55072 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
VCPP55072 AC120024.3-201ENST00000603167 156 ntBASIC1.06□□□□□ -2.24
VCPP55072 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
VCPP55072 MIR1302-2-201ENST00000607096 138 ntBASIC1.06□□□□□ -2.24
VCPP55072 AC027279.3-201ENST00000625055 122 ntBASIC1.06□□□□□ -2.24
VCPP55072 Y_RNA.143-201ENST00000363520 106 ntBASIC1.05□□□□□ -2.24
VCPP55072 RNU1-124P-201ENST00000363861 145 ntBASIC1.05□□□□□ -2.24
VCPP55072 Y_RNA.471-201ENST00000384312 102 ntBASIC1.05□□□□□ -2.24
VCPP55072 RNU6-937P-201ENST00000384325 106 ntBASIC1.05□□□□□ -2.24
VCPP55072 RNU6-163P-201ENST00000384396 106 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms