Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 SNORD58B-201ENST00000607313 66 ntBASIC1.32□□□□□ -2.2
CAPN3P20807 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.32□□□□□ -2.2
CAPN3P20807 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CAPN3P20807 Y_RNA.336-201ENST00000365307 109 ntBASIC1.31□□□□□ -2.2
CAPN3P20807 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
CAPN3P20807 MTND1P14-201ENST00000427400 950 ntBASIC1.31□□□□□ -2.2
CAPN3P20807 SNRPGP13-201ENST00000442212 177 ntBASIC1.31□□□□□ -2.2
CAPN3P20807 RNU6-1116P-201ENST00000517269 99 ntBASIC1.31□□□□□ -2.2
CAPN3P20807 JPX_2.1-201ENST00000614161 69 ntBASIC1.31□□□□□ -2.2
CAPN3P20807 MIR6779-201ENST00000617283 64 ntBASIC1.31□□□□□ -2.2
CAPN3P20807 AC090971.5-201ENST00000621102 293 ntBASIC1.31□□□□□ -2.2
CAPN3P20807 AC027335.2-201ENST00000624030 375 ntBASIC1.31□□□□□ -2.2
CAPN3P20807 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CAPN3P20807 SNORA63.7-201ENST00000365579 123 ntBASIC1.3□□□□□ -2.2
CAPN3P20807 MIR136-201ENST00000385207 82 ntBASIC1.3□□□□□ -2.2
CAPN3P20807 RNU6-910P-201ENST00000390844 107 ntBASIC1.3□□□□□ -2.2
CAPN3P20807 MIR1302-11-201ENST00000408051 138 ntBASIC1.3□□□□□ -2.2
CAPN3P20807 MIR1302-9-201ENST00000408365 138 ntBASIC1.3□□□□□ -2.2
CAPN3P20807 MIR1302-10-201ENST00000408734 138 ntBASIC1.3□□□□□ -2.2
CAPN3P20807 MTATP6P23-201ENST00000440153 476 ntBASIC1.3□□□□□ -2.2
CAPN3P20807 AL133373.1-201ENST00000497098 94 ntBASIC1.3□□□□□ -2.2
CAPN3P20807 SEPT14P8-201ENST00000508026 178 ntBASIC1.3□□□□□ -2.2
CAPN3P20807 SNORD116-28-201ENST00000516123 91 ntBASIC1.3□□□□□ -2.2
CAPN3P20807 RNA5SP404-201ENST00000517118 132 ntBASIC1.3□□□□□ -2.2
CAPN3P20807 POLR3GP1-201ENST00000594073 261 ntBASIC1.3□□□□□ -2.2
CAPN3P20807 MIR1302-2-201ENST00000607096 138 ntBASIC1.3□□□□□ -2.2
CAPN3P20807 Y_RNA.172-201ENST00000363765 102 ntBASIC1.29□□□□□ -2.2
CAPN3P20807 MIR522-201ENST00000385071 87 ntBASIC1.29□□□□□ -2.2
CAPN3P20807 SNRPGP10-201ENST00000432323 225 ntBASIC1.29□□□□□ -2.2
CAPN3P20807 POLR2KP2-201ENST00000438155 177 ntBASIC1.29□□□□□ -2.2
CAPN3P20807 AC048334.1-201ENST00000477975 159 ntBASIC1.29□□□□□ -2.2
CAPN3P20807 RNU6-1223P-201ENST00000517124 104 ntBASIC1.29□□□□□ -2.2
CAPN3P20807 AC087685.1-201ENST00000587507 141 ntBASIC1.29□□□□□ -2.2
CAPN3P20807 SNORD113-5-201ENST00000607261 78 ntBASIC1.29□□□□□ -2.2
CAPN3P20807 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
CAPN3P20807 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.29□□□□□ -2.2
CAPN3P20807 RNU1-124P-201ENST00000363861 145 ntBASIC1.28□□□□□ -2.2
CAPN3P20807 Y_RNA.310-201ENST00000365063 113 ntBASIC1.28□□□□□ -2.2
CAPN3P20807 Y_RNA.354-201ENST00000365448 111 ntBASIC1.28□□□□□ -2.2
CAPN3P20807 SNORA80D-201ENST00000384488 135 ntBASIC1.28□□□□□ -2.2
CAPN3P20807 MIR598-201ENST00000384868 97 ntBASIC1.28□□□□□ -2.2
CAPN3P20807 MIR526A1-201ENST00000384897 85 ntBASIC1.28□□□□□ -2.2
CAPN3P20807 MIR1298-201ENST00000408783 112 ntBASIC1.28□□□□□ -2.2
CAPN3P20807 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.28□□□□□ -2.2
CAPN3P20807 SNORA25.10-201ENST00000515926 124 ntBASIC1.28□□□□□ -2.2
CAPN3P20807 RNU6-966P-201ENST00000516479 104 ntBASIC1.28□□□□□ -2.2
CAPN3P20807 RNU6-1007P-201ENST00000516586 107 ntBASIC1.28□□□□□ -2.2
CAPN3P20807 SNORD45.4-201ENST00000516629 73 ntBASIC1.28□□□□□ -2.2
CAPN3P20807 DEFB117-201ENST00000602356 141 ntBASIC1.28□□□□□ -2.2
CAPN3P20807 Y_RNA.143-201ENST00000363520 106 ntBASIC1.27□□□□□ -2.21
CAPN3P20807 RNA5SP325-201ENST00000363756 130 ntBASIC1.27□□□□□ -2.21
CAPN3P20807 Y_RNA.242-201ENST00000364473 110 ntBASIC1.27□□□□□ -2.21
CAPN3P20807 Y_RNA.395-201ENST00000383945 109 ntBASIC1.27□□□□□ -2.21
CAPN3P20807 RNU6-937P-201ENST00000384325 106 ntBASIC1.27□□□□□ -2.21
CAPN3P20807 MIR802-201ENST00000390235 94 ntBASIC1.27□□□□□ -2.21
CAPN3P20807 RPL23AP54-201ENST00000495129 419 ntBASIC1.27□□□□□ -2.21
CAPN3P20807 MIR2681-201ENST00000581814 105 ntBASIC1.27□□□□□ -2.21
CAPN3P20807 AP003357.1-201ENST00000604497 148 ntBASIC1.27□□□□□ -2.21
CAPN3P20807 AC012676.2-201ENST00000619258 186 ntBASIC1.27□□□□□ -2.21
CAPN3P20807 uc_338.22-201ENST00000622722 187 ntBASIC1.27□□□□□ -2.21
CAPN3P20807 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.27□□□□□ -2.21
CAPN3P20807 SNORD14E-201ENST00000364009 85 ntBASIC1.26□□□□□ -2.21
CAPN3P20807 RNU6-53P-201ENST00000365367 106 ntBASIC1.26□□□□□ -2.21
CAPN3P20807 AC117470.1-201ENST00000381974 330 ntBASIC1.26□□□□□ -2.21
CAPN3P20807 Y_RNA.445-201ENST00000384168 102 ntBASIC1.26□□□□□ -2.21
CAPN3P20807 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.26□□□□□ -2.21
CAPN3P20807 AC063976.4-201ENST00000421971 163 ntBASIC1.26□□□□□ -2.21
CAPN3P20807 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.26□□□□□ -2.21
CAPN3P20807 HMGN1P10-201ENST00000474557 553 ntBASIC1.26□□□□□ -2.21
CAPN3P20807 Y_RNA.80-201ENST00000362996 102 ntBASIC1.25□□□□□ -2.21
CAPN3P20807 Y_RNA.485-201ENST00000384395 102 ntBASIC1.25□□□□□ -2.21
CAPN3P20807 MIR19B1-201ENST00000384829 87 ntBASIC1.25□□□□□ -2.21
CAPN3P20807 AC015922.2-201ENST00000435593 184 ntBASIC1.25□□□□□ -2.21
CAPN3P20807 RPS23P4-201ENST00000487908 423 ntBASIC1.25□□□□□ -2.21
CAPN3P20807 Y_RNA.721-201ENST00000517207 102 ntBASIC1.25□□□□□ -2.21
CAPN3P20807 AC090821.2-201ENST00000523552 176 ntBASIC1.25□□□□□ -2.21
CAPN3P20807 AC024405.2-202ENST00000532731 184 ntBASIC1.25□□□□□ -2.21
CAPN3P20807 MIR548AY-201ENST00000617669 107 ntBASIC1.25□□□□□ -2.21
CAPN3P20807 AC090574.1-201ENST00000623186 233 ntBASIC1.25□□□□□ -2.21
CAPN3P20807 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.25□□□□□ -2.21
CAPN3P20807 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.25□□□□□ -2.21
CAPN3P20807 Y_RNA.203-201ENST00000364106 102 ntBASIC1.24□□□□□ -2.21
CAPN3P20807 RNU1-93P-201ENST00000364704 169 ntBASIC1.24□□□□□ -2.21
CAPN3P20807 Y_RNA.383-201ENST00000383855 97 ntBASIC1.24□□□□□ -2.21
CAPN3P20807 RNU4-30P-201ENST00000410245 143 ntBASIC1.24□□□□□ -2.21
CAPN3P20807 AL591704.2-201ENST00000421658 181 ntBASIC1.24□□□□□ -2.21
CAPN3P20807 AC245047.8-201ENST00000456455 284 ntBASIC1.24□□□□□ -2.21
CAPN3P20807 AC004223.1-201ENST00000479840 271 ntBASIC1.24□□□□□ -2.21
CAPN3P20807 SNORD79.1-201ENST00000516069 84 ntBASIC1.24□□□□□ -2.21
CAPN3P20807 RNU7-115P-201ENST00000516433 55 ntBASIC1.24□□□□□ -2.21
CAPN3P20807 AC127455.1-201ENST00000565496 145 ntBASIC1.24□□□□□ -2.21
CAPN3P20807 AC007485.1-201ENST00000616755 206 ntBASIC1.24□□□□□ -2.21
CAPN3P20807 PVT1_3.1-201ENST00000620853 95 ntBASIC1.24□□□□□ -2.21
CAPN3P20807 AC091812.1-201ENST00000432235 1948 ntBASIC1.23□□□□□ -2.21
CAPN3P20807 SNORD81.1-201ENST00000363064 77 ntBASIC1.23□□□□□ -2.21
CAPN3P20807 Y_RNA.460-201ENST00000384255 102 ntBASIC1.23□□□□□ -2.21
CAPN3P20807 SNORD38C-201ENST00000384381 69 ntBASIC1.23□□□□□ -2.21
CAPN3P20807 AL590004.1-201ENST00000405321 300 ntBASIC1.23□□□□□ -2.21
CAPN3P20807 MTND4P19-201ENST00000446659 478 ntBASIC1.23□□□□□ -2.21
CAPN3P20807 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms