Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
HLA-DPB1P04440 Y_RNA.230-201ENST00000364348 109 ntBASIC0.59□□□□□ -2.31
HLA-DPB1P04440 snoU2-30.1-201ENST00000365012 70 ntBASIC0.59□□□□□ -2.31
HLA-DPB1P04440 SNORD14.1-201ENST00000365609 90 ntBASIC0.59□□□□□ -2.31
HLA-DPB1P04440 Y_RNA.463-201ENST00000384271 102 ntBASIC0.59□□□□□ -2.31
HLA-DPB1P04440 Y_RNA.496-201ENST00000384444 101 ntBASIC0.59□□□□□ -2.31
HLA-DPB1P04440 MIR508-201ENST00000384857 115 ntBASIC0.59□□□□□ -2.31
HLA-DPB1P04440 MTCO2P27-201ENST00000420740 428 ntBASIC0.59□□□□□ -2.31
HLA-DPB1P04440 AC099799.1-201ENST00000439809 192 ntBASIC0.59□□□□□ -2.31
HLA-DPB1P04440 SNORD123-201ENST00000459473 70 ntBASIC0.59□□□□□ -2.31
HLA-DPB1P04440 AC091951.2-201ENST00000500762 203 ntBASIC0.59□□□□□ -2.31
HLA-DPB1P04440 Y_RNA.718-201ENST00000517110 102 ntBASIC0.59□□□□□ -2.31
HLA-DPB1P04440 AC109810.1-201ENST00000534066 224 ntBASIC0.59□□□□□ -2.31
HLA-DPB1P04440 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.59□□□□□ -2.31
HLA-DPB1P04440 MIR4423-201ENST00000580922 80 ntBASIC0.59□□□□□ -2.31
HLA-DPB1P04440 DEFB117-201ENST00000602356 141 ntBASIC0.59□□□□□ -2.31
HLA-DPB1P04440 AC104985.2-201ENST00000620598 500 ntBASIC0.59□□□□□ -2.31
HLA-DPB1P04440 MIR4272-201ENST00000635924 64 ntBASIC0.59□□□□□ -2.31
HLA-DPB1P04440 AC099654.14-201ENST00000638599 341 ntBASIC0.59□□□□□ -2.31
HLA-DPB1P04440 Y_RNA.142-201ENST00000363491 102 ntBASIC0.58□□□□□ -2.32
HLA-DPB1P04440 Y_RNA.224-201ENST00000364308 111 ntBASIC0.58□□□□□ -2.32
HLA-DPB1P04440 Y_RNA.310-201ENST00000365063 113 ntBASIC0.58□□□□□ -2.32
HLA-DPB1P04440 Y_RNA.387-201ENST00000383918 102 ntBASIC0.58□□□□□ -2.32
HLA-DPB1P04440 RNU6-131P-201ENST00000391144 107 ntBASIC0.58□□□□□ -2.32
HLA-DPB1P04440 MIR1302-7-201ENST00000408841 72 ntBASIC0.58□□□□□ -2.32
HLA-DPB1P04440 RPS26P5-201ENST00000418544 335 ntBASIC0.58□□□□□ -2.32
HLA-DPB1P04440 AF228730.4-201ENST00000421457 183 ntBASIC0.58□□□□□ -2.32
HLA-DPB1P04440 VN1R91P-201ENST00000594377 169 ntBASIC0.58□□□□□ -2.32
HLA-DPB1P04440 RNU6-94P-201ENST00000607728 107 ntBASIC0.58□□□□□ -2.32
HLA-DPB1P04440 MIR1302-1-201ENST00000637932 143 ntBASIC0.58□□□□□ -2.32
HLA-DPB1P04440 AL442644.1-201ENST00000454390 3105 ntBASIC0.58□□□□□ -2.32
HLA-DPB1P04440 HSBP1P2-201ENST00000299671 229 ntBASIC0.57□□□□□ -2.32
HLA-DPB1P04440 RNU6-1283P-201ENST00000365314 105 ntBASIC0.57□□□□□ -2.32
HLA-DPB1P04440 Y_RNA.368-201ENST00000365547 113 ntBASIC0.57□□□□□ -2.32
HLA-DPB1P04440 RNU6-1323P-201ENST00000384025 107 ntBASIC0.57□□□□□ -2.32
HLA-DPB1P04440 SNORD28B-201ENST00000390993 75 ntBASIC0.57□□□□□ -2.32
HLA-DPB1P04440 MIR548J-201ENST00000408833 112 ntBASIC0.57□□□□□ -2.32
HLA-DPB1P04440 AL606490.4-201ENST00000423117 127 ntBASIC0.57□□□□□ -2.32
HLA-DPB1P04440 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.57□□□□□ -2.32
HLA-DPB1P04440 AC005042.3-201ENST00000453230 174 ntBASIC0.57□□□□□ -2.32
HLA-DPB1P04440 AC010655.3-201ENST00000478818 450 ntBASIC0.57□□□□□ -2.32
HLA-DPB1P04440 AC133485.1-201ENST00000567176 124 ntBASIC0.57□□□□□ -2.32
HLA-DPB1P04440 AC138907.6-201ENST00000568401 126 ntBASIC0.57□□□□□ -2.32
HLA-DPB1P04440 MIR3145-201ENST00000580727 82 ntBASIC0.57□□□□□ -2.32
HLA-DPB1P04440 MIR4653-201ENST00000585107 83 ntBASIC0.57□□□□□ -2.32
HLA-DPB1P04440 AL590095.2-201ENST00000604136 117 ntBASIC0.57□□□□□ -2.32
HLA-DPB1P04440 AL353765.1-201ENST00000605514 183 ntBASIC0.57□□□□□ -2.32
HLA-DPB1P04440 AL132765.2-201ENST00000610812 351 ntBASIC0.57□□□□□ -2.32
HLA-DPB1P04440 AC133104.2-201ENST00000615272 193 ntBASIC0.57□□□□□ -2.32
HLA-DPB1P04440 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.57□□□□□ -2.32
HLA-DPB1P04440 AC134026.1-201ENST00000623249 2239 ntBASIC0.56□□□□□ -2.32
HLA-DPB1P04440 RNU6-1115P-201ENST00000362490 106 ntBASIC0.56□□□□□ -2.32
HLA-DPB1P04440 RNU6-654P-201ENST00000364373 107 ntBASIC0.56□□□□□ -2.32
HLA-DPB1P04440 Y_RNA.238-201ENST00000364441 102 ntBASIC0.56□□□□□ -2.32
HLA-DPB1P04440 Y_RNA.341-201ENST00000365341 102 ntBASIC0.56□□□□□ -2.32
HLA-DPB1P04440 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
HLA-DPB1P04440 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.56□□□□□ -2.32
HLA-DPB1P04440 HMGN2P32-201ENST00000444648 269 ntBASIC0.56□□□□□ -2.32
HLA-DPB1P04440 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.56□□□□□ -2.32
HLA-DPB1P04440 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.56□□□□□ -2.32
HLA-DPB1P04440 RNU7-43P-201ENST00000516554 64 ntBASIC0.56□□□□□ -2.32
HLA-DPB1P04440 AC136628.3-201ENST00000521868 290 ntBASIC0.56□□□□□ -2.32
HLA-DPB1P04440 AC036111.3-201ENST00000526389 112 ntBASIC0.56□□□□□ -2.32
HLA-DPB1P04440 AC024405.2-202ENST00000532731 184 ntBASIC0.56□□□□□ -2.32
HLA-DPB1P04440 POLR3GP1-201ENST00000594073 261 ntBASIC0.56□□□□□ -2.32
HLA-DPB1P04440 MIR6788-201ENST00000618842 66 ntBASIC0.56□□□□□ -2.32
HLA-DPB1P04440 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.55□□□□□ -2.32
HLA-DPB1P04440 Y_RNA.148-201ENST00000363557 117 ntBASIC0.55□□□□□ -2.32
HLA-DPB1P04440 U8.7-201ENST00000364940 136 ntBASIC0.55□□□□□ -2.32
HLA-DPB1P04440 Y_RNA.331-201ENST00000365267 102 ntBASIC0.55□□□□□ -2.32
HLA-DPB1P04440 MIR15B-201ENST00000385045 98 ntBASIC0.55□□□□□ -2.32
HLA-DPB1P04440 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
HLA-DPB1P04440 MTND1P14-201ENST00000427400 950 ntBASIC0.55□□□□□ -2.32
HLA-DPB1P04440 FABP5P4-201ENST00000437203 171 ntBASIC0.55□□□□□ -2.32
HLA-DPB1P04440 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.55□□□□□ -2.32
HLA-DPB1P04440 Y_RNA.632-201ENST00000459189 102 ntBASIC0.55□□□□□ -2.32
HLA-DPB1P04440 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.55□□□□□ -2.32
HLA-DPB1P04440 AC004812.1-201ENST00000540773 146 ntBASIC0.55□□□□□ -2.32
HLA-DPB1P04440 MIR4714-201ENST00000580728 77 ntBASIC0.55□□□□□ -2.32
HLA-DPB1P04440 MIR548AR-201ENST00000582191 57 ntBASIC0.55□□□□□ -2.32
HLA-DPB1P04440 AP003357.1-201ENST00000604497 148 ntBASIC0.55□□□□□ -2.32
HLA-DPB1P04440 AC010205.1-201ENST00000616668 449 ntBASIC0.55□□□□□ -2.32
HLA-DPB1P04440 AC091925.1-201ENST00000623204 462 ntBASIC0.55□□□□□ -2.32
HLA-DPB1P04440 RNA5SP48-201ENST00000363969 126 ntBASIC0.54□□□□□ -2.32
HLA-DPB1P04440 Y_RNA.203-201ENST00000364106 102 ntBASIC0.54□□□□□ -2.32
HLA-DPB1P04440 Y_RNA.428-201ENST00000384078 102 ntBASIC0.54□□□□□ -2.32
HLA-DPB1P04440 Y_RNA.458-201ENST00000384240 102 ntBASIC0.54□□□□□ -2.32
HLA-DPB1P04440 MIR570-201ENST00000384917 97 ntBASIC0.54□□□□□ -2.32
HLA-DPB1P04440 SNORD89-201ENST00000390981 114 ntBASIC0.54□□□□□ -2.32
HLA-DPB1P04440 RNU4-30P-201ENST00000410245 143 ntBASIC0.54□□□□□ -2.32
HLA-DPB1P04440 RNA5SP95-201ENST00000410319 137 ntBASIC0.54□□□□□ -2.32
HLA-DPB1P04440 RNU6-710P-201ENST00000410424 105 ntBASIC0.54□□□□□ -2.32
HLA-DPB1P04440 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.54□□□□□ -2.32
HLA-DPB1P04440 AL392103.1-201ENST00000447000 198 ntBASIC0.54□□□□□ -2.32
HLA-DPB1P04440 RNU7-152P-201ENST00000458982 64 ntBASIC0.54□□□□□ -2.32
HLA-DPB1P04440 NDUFA4P2-201ENST00000489989 244 ntBASIC0.54□□□□□ -2.32
HLA-DPB1P04440 RNU4-77P-201ENST00000516692 156 ntBASIC0.54□□□□□ -2.32
HLA-DPB1P04440 SNORD116.3-201ENST00000517176 78 ntBASIC0.54□□□□□ -2.32
HLA-DPB1P04440 AL355375.2-201ENST00000574825 175 ntBASIC0.54□□□□□ -2.32
HLA-DPB1P04440 AC005730.3-201ENST00000583067 366 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms