Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 HMGN2P32-201ENST00000444648 269 ntBASIC-1.75□□□□□ -2.69
LTN1O94822 RNU6-201P-201ENST00000517100 61 ntBASIC-1.75□□□□□ -2.69
LTN1O94822 MTND1P5-201ENST00000517906 940 ntBASIC-1.75□□□□□ -2.69
LTN1O94822 MTND1P35-201ENST00000526739 508 ntBASIC-1.75□□□□□ -2.69
LTN1O94822 MIR4423-201ENST00000580922 80 ntBASIC-1.75□□□□□ -2.69
LTN1O94822 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.75□□□□□ -2.69
LTN1O94822 AC026741.1-201ENST00000605892 482 ntBASIC-1.75□□□□□ -2.69
LTN1O94822 SNORA27.1-201ENST00000362604 124 ntBASIC-1.76□□□□□ -2.69
LTN1O94822 RNU6-784P-201ENST00000384330 106 ntBASIC-1.76□□□□□ -2.69
LTN1O94822 MIR588-201ENST00000384900 83 ntBASIC-1.76□□□□□ -2.69
LTN1O94822 SNORD64-201ENST00000386683 67 ntBASIC-1.76□□□□□ -2.69
LTN1O94822 RNA5SP261-201ENST00000410536 106 ntBASIC-1.76□□□□□ -2.69
LTN1O94822 RNU6-387P-201ENST00000411331 105 ntBASIC-1.76□□□□□ -2.69
LTN1O94822 AL354751.2-201ENST00000415471 210 ntBASIC-1.76□□□□□ -2.69
LTN1O94822 AC018865.2-201ENST00000423631 129 ntBASIC-1.76□□□□□ -2.69
LTN1O94822 AC236972.2-201ENST00000434979 310 ntBASIC-1.76□□□□□ -2.69
LTN1O94822 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.76□□□□□ -2.69
LTN1O94822 AL445193.1-201ENST00000441183 141 ntBASIC-1.76□□□□□ -2.69
LTN1O94822 RNU6-765P-201ENST00000516916 99 ntBASIC-1.76□□□□□ -2.69
LTN1O94822 AC138207.3-201ENST00000585289 166 ntBASIC-1.76□□□□□ -2.69
LTN1O94822 BNIP3P40-201ENST00000596017 556 ntBASIC-1.76□□□□□ -2.69
LTN1O94822 MIR30D-201ENST00000362283 70 ntBASIC-1.77□□□□□ -2.69
LTN1O94822 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.77□□□□□ -2.69
LTN1O94822 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.77□□□□□ -2.69
LTN1O94822 MTND1P11-201ENST00000456661 876 ntBASIC-1.77□□□□□ -2.69
LTN1O94822 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.77□□□□□ -2.69
LTN1O94822 RNU6-830P-201ENST00000516353 107 ntBASIC-1.77□□□□□ -2.69
LTN1O94822 AL445984.1-201ENST00000637834 659 ntBASIC-1.77□□□□□ -2.69
LTN1O94822 RNU6-502P-201ENST00000362419 108 ntBASIC-1.77□□□□□ -2.69
LTN1O94822 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.77□□□□□ -2.69
LTN1O94822 SNORD114-29-201ENST00000364819 70 ntBASIC-1.77□□□□□ -2.69
LTN1O94822 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.77□□□□□ -2.69
LTN1O94822 RNU6-900P-201ENST00000384498 102 ntBASIC-1.77□□□□□ -2.69
LTN1O94822 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.77□□□□□ -2.69
LTN1O94822 AC107027.2-201ENST00000512197 115 ntBASIC-1.77□□□□□ -2.69
LTN1O94822 SNORD22.1-201ENST00000516331 125 ntBASIC-1.77□□□□□ -2.69
LTN1O94822 MIR3118-1-201ENST00000581787 76 ntBASIC-1.77□□□□□ -2.69
LTN1O94822 SNORD56.2-201ENST00000363242 71 ntBASIC-1.78□□□□□ -2.69
LTN1O94822 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.78□□□□□ -2.69
LTN1O94822 RNU6-117P-201ENST00000365415 107 ntBASIC-1.78□□□□□ -2.69
LTN1O94822 RNU6-442P-201ENST00000383968 104 ntBASIC-1.78□□□□□ -2.69
LTN1O94822 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.78□□□□□ -2.69
LTN1O94822 AL512286.1-201ENST00000439244 400 ntBASIC-1.78□□□□□ -2.69
LTN1O94822 AP000533.3-201ENST00000447704 118 ntBASIC-1.78□□□□□ -2.69
LTN1O94822 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.78□□□□□ -2.69
LTN1O94822 AC023510.2-201ENST00000622162 746 ntBASIC-1.78□□□□□ -2.69
LTN1O94822 AC127459.3-201ENST00000624328 466 ntBASIC-1.78□□□□□ -2.69
LTN1O94822 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.79□□□□□ -2.7
LTN1O94822 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.79□□□□□ -2.7
LTN1O94822 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.79□□□□□ -2.7
LTN1O94822 RNU6-727P-201ENST00000363592 107 ntBASIC-1.79□□□□□ -2.7
LTN1O94822 SNORD41.1-201ENST00000391000 69 ntBASIC-1.79□□□□□ -2.7
LTN1O94822 MTCO2P27-201ENST00000420740 428 ntBASIC-1.79□□□□□ -2.7
LTN1O94822 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-1.79□□□□□ -2.7
LTN1O94822 MTCO3P42-201ENST00000509488 518 ntBASIC-1.79□□□□□ -2.7
LTN1O94822 MTCO3P39-201ENST00000514812 518 ntBASIC-1.79□□□□□ -2.7
LTN1O94822 RNU6-175P-201ENST00000516896 107 ntBASIC-1.79□□□□□ -2.7
LTN1O94822 AC131281.1-201ENST00000522984 164 ntBASIC-1.79□□□□□ -2.7
LTN1O94822 ZNF92P2-201ENST00000600543 1059 ntBASIC-1.79□□□□□ -2.7
LTN1O94822 RMST_3.1-201ENST00000611651 109 ntBASIC-1.79□□□□□ -2.7
LTN1O94822 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.79□□□□□ -2.7
LTN1O94822 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.8□□□□□ -2.7
LTN1O94822 RNU6-865P-201ENST00000364772 107 ntBASIC-1.8□□□□□ -2.7
LTN1O94822 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.8□□□□□ -2.7
LTN1O94822 MIR517B-201ENST00000385102 67 ntBASIC-1.8□□□□□ -2.7
LTN1O94822 RNU6-370P-201ENST00000411008 104 ntBASIC-1.8□□□□□ -2.7
LTN1O94822 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.8□□□□□ -2.7
LTN1O94822 AC108059.2-201ENST00000434626 151 ntBASIC-1.8□□□□□ -2.7
LTN1O94822 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.8□□□□□ -2.7
LTN1O94822 AC244505.6-201ENST00000452829 130 ntBASIC-1.8□□□□□ -2.7
LTN1O94822 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.8□□□□□ -2.7
LTN1O94822 RNA5SP33-201ENST00000516687 98 ntBASIC-1.8□□□□□ -2.7
LTN1O94822 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.8□□□□□ -2.7
LTN1O94822 RNU6-236P-201ENST00000363886 106 ntBASIC-1.8□□□□□ -2.7
LTN1O94822 SNORD74.6-201ENST00000364796 70 ntBASIC-1.8□□□□□ -2.7
LTN1O94822 SNORA24-201ENST00000384096 131 ntBASIC-1.8□□□□□ -2.7
LTN1O94822 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.8□□□□□ -2.7
LTN1O94822 HLA-S-202ENST00000425174 53 ntBASIC-1.8□□□□□ -2.7
LTN1O94822 AL137792.2-201ENST00000443484 235 ntBASIC-1.8□□□□□ -2.7
LTN1O94822 RNU6-329P-201ENST00000459618 107 ntBASIC-1.8□□□□□ -2.7
LTN1O94822 RNU6-958P-201ENST00000516995 106 ntBASIC-1.8□□□□□ -2.7
LTN1O94822 SNORA25.17-201ENST00000517184 124 ntBASIC-1.8□□□□□ -2.7
LTN1O94822 RNU7-161P-201ENST00000517289 62 ntBASIC-1.8□□□□□ -2.7
LTN1O94822 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.8□□□□□ -2.7
LTN1O94822 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.8□□□□□ -2.7
LTN1O94822 AL049777.1-201ENST00000622740 518 ntBASIC-1.8□□□□□ -2.7
LTN1O94822 SNORD115-8-201ENST00000363856 82 ntBASIC-1.81□□□□□ -2.7
LTN1O94822 SNORD115-38-201ENST00000365037 82 ntBASIC-1.81□□□□□ -2.7
LTN1O94822 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.81□□□□□ -2.7
LTN1O94822 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.81□□□□□ -2.7
LTN1O94822 Y_RNA.576-201ENST00000384781 102 ntBASIC-1.81□□□□□ -2.7
LTN1O94822 MTND2P32-201ENST00000521584 1038 ntBASIC-1.81□□□□□ -2.7
LTN1O94822 AP003072.1-201ENST00000531740 145 ntBASIC-1.81□□□□□ -2.7
LTN1O94822 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.81□□□□□ -2.7
LTN1O94822 RNU6-227P-201ENST00000362865 103 ntBASIC-1.82□□□□□ -2.7
LTN1O94822 RNA5SP245-201ENST00000364239 121 ntBASIC-1.82□□□□□ -2.7
LTN1O94822 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.82□□□□□ -2.7
LTN1O94822 MIR558-201ENST00000384920 94 ntBASIC-1.82□□□□□ -2.7
LTN1O94822 MTATP6P14-201ENST00000455189 673 ntBASIC-1.82□□□□□ -2.7
LTN1O94822 AC022137.1-201ENST00000483735 151 ntBASIC-1.82□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 472.2 ms