Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.09□□□□□ -2.4
SHOX2O60902 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.09□□□□□ -2.4
SHOX2O60902 MTND1P26-201ENST00000440488 538 ntBASIC0.09□□□□□ -2.4
SHOX2O60902 UBE2V1P7-201ENST00000446395 340 ntBASIC0.09□□□□□ -2.4
SHOX2O60902 MTCO3P10-201ENST00000455912 772 ntBASIC0.09□□□□□ -2.4
SHOX2O60902 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.09□□□□□ -2.4
SHOX2O60902 Y_RNA.684-201ENST00000516510 99 ntBASIC0.09□□□□□ -2.4
SHOX2O60902 SNORD45.4-201ENST00000516629 73 ntBASIC0.09□□□□□ -2.4
SHOX2O60902 RNU6-63P-201ENST00000516690 95 ntBASIC0.09□□□□□ -2.4
SHOX2O60902 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.09□□□□□ -2.4
SHOX2O60902 RAC1P9-201ENST00000604990 392 ntBASIC0.09□□□□□ -2.4
SHOX2O60902 AC090517.2-201ENST00000614966 680 ntBASIC0.09□□□□□ -2.4
SHOX2O60902 AC023510.2-201ENST00000622162 746 ntBASIC0.09□□□□□ -2.4
SHOX2O60902 Y_RNA.293-201ENST00000364908 93 ntBASIC0.08□□□□□ -2.4
SHOX2O60902 RNU6-396P-201ENST00000365369 105 ntBASIC0.08□□□□□ -2.4
SHOX2O60902 MIR522-201ENST00000385071 87 ntBASIC0.08□□□□□ -2.4
SHOX2O60902 Y_RNA.693-201ENST00000516641 110 ntBASIC0.08□□□□□ -2.4
SHOX2O60902 Y_RNA.714-201ENST00000517065 90 ntBASIC0.08□□□□□ -2.4
SHOX2O60902 MIR6863-201ENST00000636112 90 ntBASIC0.08□□□□□ -2.4
SHOX2O60902 MIR377-201ENST00000362145 69 ntBASIC0.07□□□□□ -2.4
SHOX2O60902 Y_RNA.212-201ENST00000364177 102 ntBASIC0.07□□□□□ -2.4
SHOX2O60902 Y_RNA.361-201ENST00000365515 120 ntBASIC0.07□□□□□ -2.4
SHOX2O60902 RNU6-1310P-201ENST00000384153 107 ntBASIC0.07□□□□□ -2.4
SHOX2O60902 MIR520H-201ENST00000385126 88 ntBASIC0.07□□□□□ -2.4
SHOX2O60902 SNORD71-201ENST00000411292 86 ntBASIC0.07□□□□□ -2.4
SHOX2O60902 BTF3P11-201ENST00000426582 477 ntBASIC0.07□□□□□ -2.4
SHOX2O60902 RNU6-625P-201ENST00000459412 107 ntBASIC0.07□□□□□ -2.4
SHOX2O60902 RNU7-66P-201ENST00000459469 62 ntBASIC0.07□□□□□ -2.4
SHOX2O60902 AC116353.2-201ENST00000505332 712 ntBASIC0.07□□□□□ -2.4
SHOX2O60902 AC022523.2-201ENST00000561045 150 ntBASIC0.07□□□□□ -2.4
SHOX2O60902 AL355375.2-201ENST00000574825 175 ntBASIC0.07□□□□□ -2.4
SHOX2O60902 AC010525.2-201ENST00000590920 195 ntBASIC0.07□□□□□ -2.4
SHOX2O60902 AC121247.2-201ENST00000604776 136 ntBASIC0.07□□□□□ -2.4
SHOX2O60902 MIR8064-201ENST00000612863 90 ntBASIC0.07□□□□□ -2.4
SHOX2O60902 RNU6-369P-201ENST00000362515 102 ntBASIC0.06□□□□□ -2.4
SHOX2O60902 Y_RNA.52-201ENST00000362760 96 ntBASIC0.06□□□□□ -2.4
SHOX2O60902 RNU6-454P-201ENST00000364292 107 ntBASIC0.06□□□□□ -2.4
SHOX2O60902 Y_RNA.228-201ENST00000364346 98 ntBASIC0.06□□□□□ -2.4
SHOX2O60902 Y_RNA.253-201ENST00000364562 112 ntBASIC0.06□□□□□ -2.4
SHOX2O60902 SNORD116-11-201ENST00000383882 92 ntBASIC0.06□□□□□ -2.4
SHOX2O60902 Y_RNA.410-201ENST00000383992 113 ntBASIC0.06□□□□□ -2.4
SHOX2O60902 RNU6-1042P-201ENST00000384204 107 ntBASIC0.06□□□□□ -2.4
SHOX2O60902 DLGAP5P1-201ENST00000430307 464 ntBASIC0.06□□□□□ -2.4
SHOX2O60902 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.06□□□□□ -2.4
SHOX2O60902 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.06□□□□□ -2.4
SHOX2O60902 AC010486.3-201ENST00000511602 785 ntBASIC0.06□□□□□ -2.4
SHOX2O60902 MIR3612-201ENST00000579753 87 ntBASIC0.06□□□□□ -2.4
SHOX2O60902 MIR3672-201ENST00000584290 82 ntBASIC0.06□□□□□ -2.4
SHOX2O60902 AL162413.1-201ENST00000603198 110 ntBASIC0.06□□□□□ -2.4
SHOX2O60902 Y_RNA.551-201ENST00000384661 102 ntBASIC0.05□□□□□ -2.4
SHOX2O60902 MIR520F-201ENST00000384824 87 ntBASIC0.05□□□□□ -2.4
SHOX2O60902 MIR518A1-201ENST00000385068 85 ntBASIC0.05□□□□□ -2.4
SHOX2O60902 MT-TN-201ENST00000387400 73 ntBASIC0.05□□□□□ -2.4
SHOX2O60902 MTCO3P40-201ENST00000392516 676 ntBASIC0.05□□□□□ -2.4
SHOX2O60902 RNA5SP95-201ENST00000410319 137 ntBASIC0.05□□□□□ -2.4
SHOX2O60902 Y_RNA.615-201ENST00000410769 117 ntBASIC0.05□□□□□ -2.4
SHOX2O60902 RNU4-63P-201ENST00000411313 118 ntBASIC0.05□□□□□ -2.4
SHOX2O60902 AL390729.2-201ENST00000416137 156 ntBASIC0.05□□□□□ -2.4
SHOX2O60902 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.05□□□□□ -2.4
SHOX2O60902 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.05□□□□□ -2.4
SHOX2O60902 MTND4LP11-201ENST00000422184 280 ntBASIC0.05□□□□□ -2.4
SHOX2O60902 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.05□□□□□ -2.4
SHOX2O60902 RNU6-138P-201ENST00000515952 107 ntBASIC0.05□□□□□ -2.4
SHOX2O60902 RNU6-977P-201ENST00000516411 103 ntBASIC0.05□□□□□ -2.4
SHOX2O60902 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.05□□□□□ -2.4
SHOX2O60902 AL359880.1-201ENST00000621879 266 ntBASIC0.05□□□□□ -2.4
SHOX2O60902 SNORD44.1-201ENST00000363202 61 ntBASIC0.04□□□□□ -2.4
SHOX2O60902 SNORA36.1-201ENST00000363424 132 ntBASIC0.04□□□□□ -2.4
SHOX2O60902 Y_RNA.364-201ENST00000365532 101 ntBASIC0.04□□□□□ -2.4
SHOX2O60902 Y_RNA.414-201ENST00000384011 101 ntBASIC0.04□□□□□ -2.4
SHOX2O60902 RNU6-306P-201ENST00000384617 107 ntBASIC0.04□□□□□ -2.4
SHOX2O60902 Y_RNA.553-201ENST00000384670 102 ntBASIC0.04□□□□□ -2.4
SHOX2O60902 RNU6-131P-201ENST00000391144 107 ntBASIC0.04□□□□□ -2.4
SHOX2O60902 SNORA40.8-201ENST00000411034 126 ntBASIC0.04□□□□□ -2.4
SHOX2O60902 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.04□□□□□ -2.4
SHOX2O60902 SNORA25.12-201ENST00000516202 82 ntBASIC0.04□□□□□ -2.4
SHOX2O60902 RNU6-1337P-201ENST00000516525 95 ntBASIC0.04□□□□□ -2.4
SHOX2O60902 AL512360.1-201ENST00000555346 234 ntBASIC0.04□□□□□ -2.4
SHOX2O60902 MIR378F-201ENST00000578143 78 ntBASIC0.04□□□□□ -2.4
SHOX2O60902 MIR4667-201ENST00000578933 66 ntBASIC0.04□□□□□ -2.4
SHOX2O60902 RBM11P1-201ENST00000604951 799 ntBASIC0.04□□□□□ -2.4
SHOX2O60902 MIR4315-1-201ENST00000636800 73 ntBASIC0.04□□□□□ -2.4
SHOX2O60902 MIR4315-2-201ENST00000640925 73 ntBASIC0.04□□□□□ -2.4
SHOX2O60902 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
SHOX2O60902 RNU6-580P-201ENST00000365159 107 ntBASIC0.03□□□□□ -2.4
SHOX2O60902 Y_RNA.447-201ENST00000384184 113 ntBASIC0.03□□□□□ -2.4
SHOX2O60902 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
SHOX2O60902 MIR190B-201ENST00000401119 79 ntBASIC0.03□□□□□ -2.4
SHOX2O60902 MLLT10P1-201ENST00000418346 262 ntBASIC0.03□□□□□ -2.4
SHOX2O60902 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.03□□□□□ -2.4
SHOX2O60902 SCARNA8-201ENST00000515924 131 ntBASIC0.03□□□□□ -2.4
SHOX2O60902 RNU6-863P-201ENST00000515989 104 ntBASIC0.03□□□□□ -2.4
SHOX2O60902 RNU6-782P-201ENST00000516852 104 ntBASIC0.03□□□□□ -2.4
SHOX2O60902 IGKV1-22-201ENST00000524313 326 ntBASIC0.03□□□□□ -2.4
SHOX2O60902 MIR3678-201ENST00000578455 94 ntBASIC0.03□□□□□ -2.4
SHOX2O60902 NBR2-204ENST00000587322 63 ntBASIC0.03□□□□□ -2.4
SHOX2O60902 uc_338.16-201ENST00000621804 95 ntBASIC0.03□□□□□ -2.4
SHOX2O60902 RNU6-879P-201ENST00000364328 108 ntBASIC0.02□□□□□ -2.41
SHOX2O60902 U8.7-201ENST00000364940 136 ntBASIC0.02□□□□□ -2.41
SHOX2O60902 SNORD38C-201ENST00000384381 69 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 217.2 ms