Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.19□□□□□ -2.6
SSSCA1O60232 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
SSSCA1O60232 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.19□□□□□ -2.6
SSSCA1O60232 SNORD93-201ENST00000408813 74 ntBASIC-1.19□□□□□ -2.6
SSSCA1O60232 HMGN2P32-201ENST00000444648 269 ntBASIC-1.19□□□□□ -2.6
SSSCA1O60232 snoU13.2-201ENST00000459201 104 ntBASIC-1.19□□□□□ -2.6
SSSCA1O60232 RNU2-69P-201ENST00000516061 100 ntBASIC-1.19□□□□□ -2.6
SSSCA1O60232 AC069113.1-201ENST00000517763 267 ntBASIC-1.19□□□□□ -2.6
SSSCA1O60232 MTND1P35-201ENST00000526739 508 ntBASIC-1.19□□□□□ -2.6
SSSCA1O60232 RNU6-85P-201ENST00000605989 107 ntBASIC-1.19□□□□□ -2.6
SSSCA1O60232 AC068137.4-201ENST00000638485 296 ntBASIC-1.19□□□□□ -2.6
SSSCA1O60232 ZNF299P-201ENST00000406845 1804 ntBASIC-1.19□□□□□ -2.6
SSSCA1O60232 MIR409-201ENST00000362237 79 ntBASIC-1.2□□□□□ -2.6
SSSCA1O60232 Y_RNA.18-201ENST00000362461 102 ntBASIC-1.2□□□□□ -2.6
SSSCA1O60232 SNORA27.1-201ENST00000362604 124 ntBASIC-1.2□□□□□ -2.6
SSSCA1O60232 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.2□□□□□ -2.6
SSSCA1O60232 RNU6-434P-201ENST00000384376 107 ntBASIC-1.2□□□□□ -2.6
SSSCA1O60232 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.2□□□□□ -2.6
SSSCA1O60232 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.2□□□□□ -2.6
SSSCA1O60232 MTCO3P38-201ENST00000468910 766 ntBASIC-1.2□□□□□ -2.6
SSSCA1O60232 SNORA25.10-201ENST00000515926 124 ntBASIC-1.2□□□□□ -2.6
SSSCA1O60232 AP003181.2-201ENST00000528941 181 ntBASIC-1.2□□□□□ -2.6
SSSCA1O60232 MIR3179-1-201ENST00000578940 84 ntBASIC-1.2□□□□□ -2.6
SSSCA1O60232 MIR3179-2-201ENST00000579107 84 ntBASIC-1.2□□□□□ -2.6
SSSCA1O60232 MIR3179-3-201ENST00000579566 84 ntBASIC-1.2□□□□□ -2.6
SSSCA1O60232 AC004223.4-201ENST00000612426 332 ntBASIC-1.2□□□□□ -2.6
SSSCA1O60232 MIR6082-201ENST00000613604 109 ntBASIC-1.2□□□□□ -2.6
SSSCA1O60232 MIR7844-201ENST00000616161 122 ntBASIC-1.2□□□□□ -2.6
SSSCA1O60232 MIR3179-4-201ENST00000617599 84 ntBASIC-1.2□□□□□ -2.6
SSSCA1O60232 AC127459.3-201ENST00000624328 466 ntBASIC-1.2□□□□□ -2.6
SSSCA1O60232 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.21□□□□□ -2.6
SSSCA1O60232 RNU6-226P-201ENST00000363778 107 ntBASIC-1.21□□□□□ -2.6
SSSCA1O60232 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.21□□□□□ -2.6
SSSCA1O60232 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.21□□□□□ -2.6
SSSCA1O60232 RNU6-535P-201ENST00000384722 107 ntBASIC-1.21□□□□□ -2.6
SSSCA1O60232 MIR147A-201ENST00000385079 72 ntBASIC-1.21□□□□□ -2.6
SSSCA1O60232 SNORD70.1-201ENST00000391007 85 ntBASIC-1.21□□□□□ -2.6
SSSCA1O60232 SNORD110-201ENST00000408189 75 ntBASIC-1.21□□□□□ -2.6
SSSCA1O60232 RNA5SP266-201ENST00000410273 108 ntBASIC-1.21□□□□□ -2.6
SSSCA1O60232 HSPE1P23-201ENST00000509838 286 ntBASIC-1.21□□□□□ -2.6
SSSCA1O60232 SNORA25.13-201ENST00000516395 103 ntBASIC-1.21□□□□□ -2.6
SSSCA1O60232 AC013244.3-201ENST00000605614 388 ntBASIC-1.21□□□□□ -2.6
SSSCA1O60232 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.22□□□□□ -2.6
SSSCA1O60232 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.22□□□□□ -2.6
SSSCA1O60232 Y_RNA.97-201ENST00000363094 102 ntBASIC-1.22□□□□□ -2.6
SSSCA1O60232 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.22□□□□□ -2.6
SSSCA1O60232 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.22□□□□□ -2.6
SSSCA1O60232 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.22□□□□□ -2.6
SSSCA1O60232 RNU6-926P-201ENST00000384075 107 ntBASIC-1.22□□□□□ -2.6
SSSCA1O60232 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.22□□□□□ -2.6
SSSCA1O60232 Y_RNA.472-201ENST00000384322 102 ntBASIC-1.22□□□□□ -2.6
SSSCA1O60232 RNU7-188P-201ENST00000517063 64 ntBASIC-1.22□□□□□ -2.6
SSSCA1O60232 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.22□□□□□ -2.6
SSSCA1O60232 RNU6-403P-201ENST00000363163 104 ntBASIC-1.23□□□□□ -2.61
SSSCA1O60232 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.23□□□□□ -2.61
SSSCA1O60232 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.23□□□□□ -2.61
SSSCA1O60232 MT-TF-201ENST00000387314 71 ntBASIC-1.23□□□□□ -2.61
SSSCA1O60232 MIR8485-201ENST00000401372 91 ntBASIC-1.23□□□□□ -2.61
SSSCA1O60232 AL354751.2-201ENST00000415471 210 ntBASIC-1.23□□□□□ -2.61
SSSCA1O60232 AC006210.1-201ENST00000424882 111 ntBASIC-1.23□□□□□ -2.61
SSSCA1O60232 HLA-S-202ENST00000425174 53 ntBASIC-1.23□□□□□ -2.61
SSSCA1O60232 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.23□□□□□ -2.61
SSSCA1O60232 AC091179.3-201ENST00000474761 144 ntBASIC-1.23□□□□□ -2.61
SSSCA1O60232 SCARNA24.1-201ENST00000516465 137 ntBASIC-1.23□□□□□ -2.61
SSSCA1O60232 RNU6-1220P-201ENST00000517126 108 ntBASIC-1.23□□□□□ -2.61
SSSCA1O60232 AC131281.1-201ENST00000522984 164 ntBASIC-1.23□□□□□ -2.61
SSSCA1O60232 AL512427.1-201ENST00000618593 349 ntBASIC-1.23□□□□□ -2.61
SSSCA1O60232 MTND5P17-201ENST00000418405 1603 ntBASIC-1.23□□□□□ -2.61
SSSCA1O60232 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.24□□□□□ -2.61
SSSCA1O60232 RNU6-784P-201ENST00000384330 106 ntBASIC-1.24□□□□□ -2.61
SSSCA1O60232 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.24□□□□□ -2.61
SSSCA1O60232 SNORD73A-201ENST00000386062 65 ntBASIC-1.24□□□□□ -2.61
SSSCA1O60232 SNORD12C-201ENST00000386307 89 ntBASIC-1.24□□□□□ -2.61
SSSCA1O60232 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.24□□□□□ -2.61
SSSCA1O60232 MRPL42P2-201ENST00000403169 426 ntBASIC-1.24□□□□□ -2.61
SSSCA1O60232 AC244505.6-201ENST00000452829 130 ntBASIC-1.24□□□□□ -2.61
SSSCA1O60232 RNA5SP180-201ENST00000516181 101 ntBASIC-1.24□□□□□ -2.61
SSSCA1O60232 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.24□□□□□ -2.61
SSSCA1O60232 AC008507.2-201ENST00000588402 1176 ntBASIC-1.24□□□□□ -2.61
SSSCA1O60232 AL596211.1-201ENST00000569873 2277 ntBASIC-1.25□□□□□ -2.61
SSSCA1O60232 RNU6-502P-201ENST00000362419 108 ntBASIC-1.25□□□□□ -2.61
SSSCA1O60232 SNORA63.5-201ENST00000363548 123 ntBASIC-1.25□□□□□ -2.61
SSSCA1O60232 SNORD38B-201ENST00000384690 67 ntBASIC-1.25□□□□□ -2.61
SSSCA1O60232 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.25□□□□□ -2.61
SSSCA1O60232 RNA5SP118-201ENST00000410385 109 ntBASIC-1.25□□□□□ -2.61
SSSCA1O60232 AC236972.2-201ENST00000434979 310 ntBASIC-1.25□□□□□ -2.61
SSSCA1O60232 AC022137.1-201ENST00000483735 151 ntBASIC-1.25□□□□□ -2.61
SSSCA1O60232 AC112204.1-201ENST00000502591 103 ntBASIC-1.25□□□□□ -2.61
SSSCA1O60232 SNORD22.1-201ENST00000516331 125 ntBASIC-1.25□□□□□ -2.61
SSSCA1O60232 RNU6-107P-201ENST00000516643 102 ntBASIC-1.25□□□□□ -2.61
SSSCA1O60232 MTND4LP18-201ENST00000526864 291 ntBASIC-1.25□□□□□ -2.61
SSSCA1O60232 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.25□□□□□ -2.61
SSSCA1O60232 AC073869.9-201ENST00000641610 120 ntBASIC-1.25□□□□□ -2.61
SSSCA1O60232 SNORD115-8-201ENST00000363856 82 ntBASIC-1.26□□□□□ -2.61
SSSCA1O60232 SNORD115-38-201ENST00000365037 82 ntBASIC-1.26□□□□□ -2.61
SSSCA1O60232 SNORD115.1-201ENST00000391109 76 ntBASIC-1.26□□□□□ -2.61
SSSCA1O60232 AC096949.1-201ENST00000412047 152 ntBASIC-1.26□□□□□ -2.61
SSSCA1O60232 USP9YP16-201ENST00000430287 407 ntBASIC-1.26□□□□□ -2.61
SSSCA1O60232 SNRPGP14-201ENST00000435400 219 ntBASIC-1.26□□□□□ -2.61
SSSCA1O60232 SNORA13-201ENST00000458790 133 ntBASIC-1.26□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms