Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 Y_RNA.341-201ENST00000365341 102 ntBASIC0.68□□□□□ -2.3
CXCL13O43927 Y_RNA.428-201ENST00000384078 102 ntBASIC0.68□□□□□ -2.3
CXCL13O43927 MIR1185-1-201ENST00000408598 86 ntBASIC0.68□□□□□ -2.3
CXCL13O43927 MIR548J-201ENST00000408833 112 ntBASIC0.68□□□□□ -2.3
CXCL13O43927 AC004941.2-201ENST00000427009 228 ntBASIC0.68□□□□□ -2.3
CXCL13O43927 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.68□□□□□ -2.3
CXCL13O43927 SNORD123-201ENST00000459473 70 ntBASIC0.68□□□□□ -2.3
CXCL13O43927 Y_RNA.718-201ENST00000517110 102 ntBASIC0.68□□□□□ -2.3
CXCL13O43927 DEFB108E-201ENST00000524692 240 ntBASIC0.68□□□□□ -2.3
CXCL13O43927 AP003716.2-201ENST00000528260 108 ntBASIC0.68□□□□□ -2.3
CXCL13O43927 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.68□□□□□ -2.3
CXCL13O43927 AC023827.1-201ENST00000569247 97 ntBASIC0.68□□□□□ -2.3
CXCL13O43927 MIR4653-201ENST00000585107 83 ntBASIC0.68□□□□□ -2.3
CXCL13O43927 AL078603.1-201ENST00000603824 313 ntBASIC0.68□□□□□ -2.3
CXCL13O43927 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CXCL13O43927 RNA5SP48-201ENST00000363969 126 ntBASIC0.67□□□□□ -2.3
CXCL13O43927 RNU6-1323P-201ENST00000384025 107 ntBASIC0.67□□□□□ -2.3
CXCL13O43927 MIR605-201ENST00000385078 83 ntBASIC0.67□□□□□ -2.3
CXCL13O43927 RNU7-116P-201ENST00000516940 62 ntBASIC0.67□□□□□ -2.3
CXCL13O43927 SNORD116.3-201ENST00000517176 78 ntBASIC0.67□□□□□ -2.3
CXCL13O43927 AC136628.3-201ENST00000521868 290 ntBASIC0.67□□□□□ -2.3
CXCL13O43927 MIR151B-201ENST00000584249 96 ntBASIC0.67□□□□□ -2.3
CXCL13O43927 AC131055.1-201ENST00000584626 316 ntBASIC0.67□□□□□ -2.3
CXCL13O43927 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.67□□□□□ -2.3
CXCL13O43927 AC084781.2-201ENST00000615568 161 ntBASIC0.67□□□□□ -2.3
CXCL13O43927 MIR4272-201ENST00000635924 64 ntBASIC0.67□□□□□ -2.3
CXCL13O43927 Y_RNA.310-201ENST00000365063 113 ntBASIC0.66□□□□□ -2.3
CXCL13O43927 Y_RNA.331-201ENST00000365267 102 ntBASIC0.66□□□□□ -2.3
CXCL13O43927 Y_RNA.368-201ENST00000365547 113 ntBASIC0.66□□□□□ -2.3
CXCL13O43927 Y_RNA.390-201ENST00000383932 102 ntBASIC0.66□□□□□ -2.3
CXCL13O43927 Y_RNA.456-201ENST00000384232 111 ntBASIC0.66□□□□□ -2.3
CXCL13O43927 Y_RNA.463-201ENST00000384271 102 ntBASIC0.66□□□□□ -2.3
CXCL13O43927 AC006461.1-201ENST00000412637 326 ntBASIC0.66□□□□□ -2.3
CXCL13O43927 RBMX2P4-201ENST00000441256 376 ntBASIC0.66□□□□□ -2.3
CXCL13O43927 RN7SKP164-201ENST00000516138 266 ntBASIC0.66□□□□□ -2.3
CXCL13O43927 AC109810.1-201ENST00000534066 224 ntBASIC0.66□□□□□ -2.3
CXCL13O43927 MIR4423-201ENST00000580922 80 ntBASIC0.66□□□□□ -2.3
CXCL13O43927 POLR3GP1-201ENST00000594073 261 ntBASIC0.66□□□□□ -2.3
CXCL13O43927 Y_RNA.772-201ENST00000606692 102 ntBASIC0.66□□□□□ -2.3
CXCL13O43927 AC106800.4-201ENST00000614905 153 ntBASIC0.66□□□□□ -2.3
CXCL13O43927 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
CXCL13O43927 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
CXCL13O43927 Y_RNA.116-201ENST00000363292 103 ntBASIC0.65□□□□□ -2.31
CXCL13O43927 SNORD14E-201ENST00000364009 85 ntBASIC0.65□□□□□ -2.31
CXCL13O43927 MIR100-201ENST00000385259 80 ntBASIC0.65□□□□□ -2.31
CXCL13O43927 AL590004.1-201ENST00000405321 300 ntBASIC0.65□□□□□ -2.31
CXCL13O43927 AC024067.1-201ENST00000426199 223 ntBASIC0.65□□□□□ -2.31
CXCL13O43927 AC005730.3-201ENST00000583067 366 ntBASIC0.65□□□□□ -2.31
CXCL13O43927 UBE2V2P2-201ENST00000587677 504 ntBASIC0.65□□□□□ -2.31
CXCL13O43927 DEFB117-201ENST00000602356 141 ntBASIC0.65□□□□□ -2.31
CXCL13O43927 AL132765.2-201ENST00000610812 351 ntBASIC0.65□□□□□ -2.31
CXCL13O43927 JPX_2.1-201ENST00000614161 69 ntBASIC0.65□□□□□ -2.31
CXCL13O43927 AC010205.1-201ENST00000616668 449 ntBASIC0.65□□□□□ -2.31
CXCL13O43927 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.64□□□□□ -2.31
CXCL13O43927 Y_RNA.203-201ENST00000364106 102 ntBASIC0.64□□□□□ -2.31
CXCL13O43927 Y_RNA.462-201ENST00000384268 102 ntBASIC0.64□□□□□ -2.31
CXCL13O43927 MIR508-201ENST00000384857 115 ntBASIC0.64□□□□□ -2.31
CXCL13O43927 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
CXCL13O43927 MTCO2P27-201ENST00000420740 428 ntBASIC0.64□□□□□ -2.31
CXCL13O43927 AL035398.1-201ENST00000430869 322 ntBASIC0.64□□□□□ -2.31
CXCL13O43927 AC117454.1-201ENST00000491120 168 ntBASIC0.64□□□□□ -2.31
CXCL13O43927 AC091951.2-201ENST00000500762 203 ntBASIC0.64□□□□□ -2.31
CXCL13O43927 RNA5SP220-201ENST00000516298 104 ntBASIC0.64□□□□□ -2.31
CXCL13O43927 RNU7-110P-201ENST00000516891 62 ntBASIC0.64□□□□□ -2.31
CXCL13O43927 AC024405.2-202ENST00000532731 184 ntBASIC0.64□□□□□ -2.31
CXCL13O43927 AC133485.1-201ENST00000567176 124 ntBASIC0.64□□□□□ -2.31
CXCL13O43927 AC138907.6-201ENST00000568401 126 ntBASIC0.64□□□□□ -2.31
CXCL13O43927 AP003357.1-201ENST00000604497 148 ntBASIC0.64□□□□□ -2.31
CXCL13O43927 AL353765.1-201ENST00000605514 183 ntBASIC0.64□□□□□ -2.31
CXCL13O43927 AC007742.2-201ENST00000618226 398 ntBASIC0.64□□□□□ -2.31
CXCL13O43927 MIR6734-201ENST00000621166 68 ntBASIC0.64□□□□□ -2.31
CXCL13O43927 AC134026.1-201ENST00000623249 2239 ntBASIC0.63□□□□□ -2.31
CXCL13O43927 HSBP1P2-201ENST00000299671 229 ntBASIC0.63□□□□□ -2.31
CXCL13O43927 Y_RNA.148-201ENST00000363557 117 ntBASIC0.63□□□□□ -2.31
CXCL13O43927 Y_RNA.187-201ENST00000363918 113 ntBASIC0.63□□□□□ -2.31
CXCL13O43927 SNORD38C-201ENST00000384381 69 ntBASIC0.63□□□□□ -2.31
CXCL13O43927 MIR146A-201ENST00000385201 99 ntBASIC0.63□□□□□ -2.31
CXCL13O43927 RPS26P5-201ENST00000418544 335 ntBASIC0.63□□□□□ -2.31
CXCL13O43927 AL606490.4-201ENST00000423117 127 ntBASIC0.63□□□□□ -2.31
CXCL13O43927 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.63□□□□□ -2.31
CXCL13O43927 RPL23AP54-201ENST00000495129 419 ntBASIC0.63□□□□□ -2.31
CXCL13O43927 AL355375.2-201ENST00000574825 175 ntBASIC0.63□□□□□ -2.31
CXCL13O43927 SNORA4-201ENST00000584302 138 ntBASIC0.63□□□□□ -2.31
CXCL13O43927 RPS29P30-201ENST00000600975 111 ntBASIC0.63□□□□□ -2.31
CXCL13O43927 AC011373.1-201ENST00000607270 237 ntBASIC0.63□□□□□ -2.31
CXCL13O43927 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.63□□□□□ -2.31
CXCL13O43927 AC008133.2-201ENST00000624540 351 ntBASIC0.63□□□□□ -2.31
CXCL13O43927 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.63□□□□□ -2.31
CXCL13O43927 RNU6-1115P-201ENST00000362490 106 ntBASIC0.62□□□□□ -2.31
CXCL13O43927 RNU6-1335P-201ENST00000365426 107 ntBASIC0.62□□□□□ -2.31
CXCL13O43927 RNY1P14-201ENST00000384426 108 ntBASIC0.62□□□□□ -2.31
CXCL13O43927 MIR518E-201ENST00000385252 88 ntBASIC0.62□□□□□ -2.31
CXCL13O43927 MIR802-201ENST00000390235 94 ntBASIC0.62□□□□□ -2.31
CXCL13O43927 SNORD89-201ENST00000390981 114 ntBASIC0.62□□□□□ -2.31
CXCL13O43927 AF228730.4-201ENST00000421457 183 ntBASIC0.62□□□□□ -2.31
CXCL13O43927 Y_RNA.632-201ENST00000459189 102 ntBASIC0.62□□□□□ -2.31
CXCL13O43927 U7.7-201ENST00000459276 60 ntBASIC0.62□□□□□ -2.31
CXCL13O43927 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.62□□□□□ -2.31
CXCL13O43927 Y_RNA.661-201ENST00000516003 99 ntBASIC0.62□□□□□ -2.31
CXCL13O43927 RNU7-115P-201ENST00000516433 55 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms