Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 AL050343.2-201ENST00000607338 280 ntBASIC1.29□□□□□ -2.2
CREB3O43889 JPX_2.1-201ENST00000614161 69 ntBASIC1.29□□□□□ -2.2
CREB3O43889 AC008163.1-202ENST00000636004 2889 ntBASIC1.28□□□□□ -2.2
CREB3O43889 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CREB3O43889 Y_RNA.363-201ENST00000365529 113 ntBASIC1.28□□□□□ -2.2
CREB3O43889 SNORD63-201ENST00000384262 68 ntBASIC1.28□□□□□ -2.2
CREB3O43889 MIR520C-201ENST00000385005 87 ntBASIC1.28□□□□□ -2.2
CREB3O43889 RNU7-21P-201ENST00000459430 62 ntBASIC1.28□□□□□ -2.2
CREB3O43889 RNU7-43P-201ENST00000516554 64 ntBASIC1.28□□□□□ -2.2
CREB3O43889 PRELID3BP2-201ENST00000605362 201 ntBASIC1.28□□□□□ -2.2
CREB3O43889 RNA5SP48-201ENST00000363969 126 ntBASIC1.27□□□□□ -2.21
CREB3O43889 Y_RNA.191-201ENST00000363972 113 ntBASIC1.27□□□□□ -2.21
CREB3O43889 SNORD14E-201ENST00000364009 85 ntBASIC1.27□□□□□ -2.21
CREB3O43889 Y_RNA.310-201ENST00000365063 113 ntBASIC1.27□□□□□ -2.21
CREB3O43889 Y_RNA.551-201ENST00000384661 102 ntBASIC1.27□□□□□ -2.21
CREB3O43889 RNU6-1248P-201ENST00000391096 64 ntBASIC1.27□□□□□ -2.21
CREB3O43889 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.27□□□□□ -2.21
CREB3O43889 MTND3P22-201ENST00000510932 243 ntBASIC1.27□□□□□ -2.21
CREB3O43889 RNU6-475P-201ENST00000516073 104 ntBASIC1.27□□□□□ -2.21
CREB3O43889 AC090142.3-201ENST00000519012 385 ntBASIC1.27□□□□□ -2.21
CREB3O43889 AC090821.2-201ENST00000523552 176 ntBASIC1.27□□□□□ -2.21
CREB3O43889 AC093027.1-201ENST00000546698 429 ntBASIC1.27□□□□□ -2.21
CREB3O43889 AP003357.1-201ENST00000604497 148 ntBASIC1.27□□□□□ -2.21
CREB3O43889 AC104985.2-201ENST00000620598 500 ntBASIC1.27□□□□□ -2.21
CREB3O43889 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CREB3O43889 AF228730.4-201ENST00000421457 183 ntBASIC1.26□□□□□ -2.21
CREB3O43889 MRPL35P3-201ENST00000421557 364 ntBASIC1.26□□□□□ -2.21
CREB3O43889 snoU13.18-201ENST00000459483 104 ntBASIC1.26□□□□□ -2.21
CREB3O43889 RNA5SP102-201ENST00000516865 106 ntBASIC1.26□□□□□ -2.21
CREB3O43889 DEFB117-201ENST00000602356 141 ntBASIC1.26□□□□□ -2.21
CREB3O43889 Y_RNA.5-201ENST00000362334 102 ntBASIC1.25□□□□□ -2.21
CREB3O43889 MIR802-201ENST00000390235 94 ntBASIC1.25□□□□□ -2.21
CREB3O43889 RPL23AP54-201ENST00000495129 419 ntBASIC1.25□□□□□ -2.21
CREB3O43889 PDCD5P2-201ENST00000507570 312 ntBASIC1.25□□□□□ -2.21
CREB3O43889 MIR3192-201ENST00000584920 77 ntBASIC1.25□□□□□ -2.21
CREB3O43889 AC112487.2-201ENST00000637950 304 ntBASIC1.25□□□□□ -2.21
CREB3O43889 RNA5SP264-201ENST00000363115 107 ntBASIC1.24□□□□□ -2.21
CREB3O43889 Y_RNA.203-201ENST00000364106 102 ntBASIC1.24□□□□□ -2.21
CREB3O43889 RNY3-201ENST00000365484 102 ntBASIC1.24□□□□□ -2.21
CREB3O43889 SNORD38C-201ENST00000384381 69 ntBASIC1.24□□□□□ -2.21
CREB3O43889 MIR942-201ENST00000401111 86 ntBASIC1.24□□□□□ -2.21
CREB3O43889 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.24□□□□□ -2.21
CREB3O43889 RNU6-507P-201ENST00000516045 100 ntBASIC1.24□□□□□ -2.21
CREB3O43889 AC024405.2-202ENST00000532731 184 ntBASIC1.24□□□□□ -2.21
CREB3O43889 AC127455.1-201ENST00000565496 145 ntBASIC1.24□□□□□ -2.21
CREB3O43889 MIR2681-201ENST00000581814 105 ntBASIC1.24□□□□□ -2.21
CREB3O43889 MIR4452-201ENST00000583004 71 ntBASIC1.24□□□□□ -2.21
CREB3O43889 AC006157.1-201ENST00000611750 366 ntBASIC1.24□□□□□ -2.21
CREB3O43889 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.24□□□□□ -2.21
CREB3O43889 MIR103A2-201ENST00000362154 78 ntBASIC1.23□□□□□ -2.21
CREB3O43889 Y_RNA.197-201ENST00000364004 102 ntBASIC1.23□□□□□ -2.21
CREB3O43889 Y_RNA.242-201ENST00000364473 110 ntBASIC1.23□□□□□ -2.21
CREB3O43889 SNORD50B-201ENST00000364995 70 ntBASIC1.23□□□□□ -2.21
CREB3O43889 RNU6-969P-201ENST00000383900 105 ntBASIC1.23□□□□□ -2.21
CREB3O43889 Y_RNA.471-201ENST00000384312 102 ntBASIC1.23□□□□□ -2.21
CREB3O43889 SNORA75.2-201ENST00000391138 150 ntBASIC1.23□□□□□ -2.21
CREB3O43889 SNORA75.3-201ENST00000391231 150 ntBASIC1.23□□□□□ -2.21
CREB3O43889 MIR1285-1-201ENST00000408593 84 ntBASIC1.23□□□□□ -2.21
CREB3O43889 MTND1P14-201ENST00000427400 950 ntBASIC1.23□□□□□ -2.21
CREB3O43889 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.23□□□□□ -2.21
CREB3O43889 SNORD124-201ENST00000459577 104 ntBASIC1.23□□□□□ -2.21
CREB3O43889 RPS26P48-201ENST00000491713 339 ntBASIC1.23□□□□□ -2.21
CREB3O43889 RNU6-1170P-201ENST00000515974 106 ntBASIC1.23□□□□□ -2.21
CREB3O43889 RNU6-1007P-201ENST00000516586 107 ntBASIC1.23□□□□□ -2.21
CREB3O43889 SNORA18.7-201ENST00000516910 131 ntBASIC1.23□□□□□ -2.21
CREB3O43889 MIR4764-201ENST00000580680 88 ntBASIC1.23□□□□□ -2.21
CREB3O43889 SNORD58B-201ENST00000607313 66 ntBASIC1.23□□□□□ -2.21
CREB3O43889 MIR548AY-201ENST00000617669 107 ntBASIC1.23□□□□□ -2.21
CREB3O43889 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
CREB3O43889 Y_RNA.58-201ENST00000362807 102 ntBASIC1.22□□□□□ -2.21
CREB3O43889 Y_RNA.154-201ENST00000363624 102 ntBASIC1.22□□□□□ -2.21
CREB3O43889 RNY3P1-201ENST00000365085 102 ntBASIC1.22□□□□□ -2.21
CREB3O43889 RNU6-53P-201ENST00000365367 106 ntBASIC1.22□□□□□ -2.21
CREB3O43889 MIR489-201ENST00000384923 84 ntBASIC1.22□□□□□ -2.21
CREB3O43889 AL590004.1-201ENST00000405321 300 ntBASIC1.22□□□□□ -2.21
CREB3O43889 FABP5P4-201ENST00000437203 171 ntBASIC1.22□□□□□ -2.21
CREB3O43889 HMGN1P10-201ENST00000474557 553 ntBASIC1.22□□□□□ -2.21
CREB3O43889 RNU7-115P-201ENST00000516433 55 ntBASIC1.22□□□□□ -2.21
CREB3O43889 AC040926.1-201ENST00000530195 238 ntBASIC1.22□□□□□ -2.21
CREB3O43889 SNORA4-201ENST00000584302 138 ntBASIC1.22□□□□□ -2.21
CREB3O43889 AL078603.1-201ENST00000603824 313 ntBASIC1.22□□□□□ -2.21
CREB3O43889 AL080274.1-201ENST00000605565 220 ntBASIC1.22□□□□□ -2.21
CREB3O43889 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.21□□□□□ -2.22
CREB3O43889 SNORD81.1-201ENST00000363064 77 ntBASIC1.21□□□□□ -2.22
CREB3O43889 RNU6-442P-201ENST00000383968 104 ntBASIC1.21□□□□□ -2.22
CREB3O43889 POLR2KP2-201ENST00000438155 177 ntBASIC1.21□□□□□ -2.22
CREB3O43889 SEPT14P8-201ENST00000508026 178 ntBASIC1.21□□□□□ -2.22
CREB3O43889 SNORD113-5-201ENST00000607261 78 ntBASIC1.21□□□□□ -2.22
CREB3O43889 Y_RNA.804-201ENST00000615262 101 ntBASIC1.21□□□□□ -2.22
CREB3O43889 RNU4-73P-201ENST00000363164 141 ntBASIC1.2□□□□□ -2.22
CREB3O43889 Y_RNA.143-201ENST00000363520 106 ntBASIC1.2□□□□□ -2.22
CREB3O43889 RNU1-36P-201ENST00000365130 165 ntBASIC1.2□□□□□ -2.22
CREB3O43889 Y_RNA.431-201ENST00000384086 102 ntBASIC1.2□□□□□ -2.22
CREB3O43889 RNU6-937P-201ENST00000384325 106 ntBASIC1.2□□□□□ -2.22
CREB3O43889 RNY1P14-201ENST00000384426 108 ntBASIC1.2□□□□□ -2.22
CREB3O43889 Y_RNA.579-201ENST00000390939 94 ntBASIC1.2□□□□□ -2.22
CREB3O43889 AC022028.1-201ENST00000412054 408 ntBASIC1.2□□□□□ -2.22
CREB3O43889 SNORD123-201ENST00000459473 70 ntBASIC1.2□□□□□ -2.22
CREB3O43889 AC117454.1-201ENST00000491120 168 ntBASIC1.2□□□□□ -2.22
CREB3O43889 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms