Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 MIR644A-201ENST00000385262 94 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-747P-201ENST00000390928 104 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-241P-201ENST00000391148 104 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-447P-201ENST00000410293 104 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-355P-201ENST00000410427 104 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-791P-201ENST00000410467 104 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-705P-201ENST00000410601 104 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-860P-201ENST00000410860 104 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-785P-201ENST00000411324 104 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 MIR18B-201ENST00000454574 71 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 AC091959.1-201ENST00000495857 238 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU2-12P-201ENST00000517216 168 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 U6.90-201ENST00000614007 104 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 U6.70-201ENST00000620287 104 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 AC097520.1-201ENST00000624435 385 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 AC010332.2-201ENST00000613083 1904 ntBASIC-0.28□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.28□□□□□ -2.45
TRAV1-1A0A0B4J248 RNA5SP128-201ENST00000365305 116 ntBASIC-0.28□□□□□ -2.45
TRAV1-1A0A0B4J248 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.28□□□□□ -2.45
TRAV1-1A0A0B4J248 MIR760-201ENST00000390220 80 ntBASIC-0.28□□□□□ -2.45
TRAV1-1A0A0B4J248 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.28□□□□□ -2.45
TRAV1-1A0A0B4J248 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-0.28□□□□□ -2.45
TRAV1-1A0A0B4J248 SCARNA8-201ENST00000515924 131 ntBASIC-0.28□□□□□ -2.45
TRAV1-1A0A0B4J248 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.28□□□□□ -2.45
TRAV1-1A0A0B4J248 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.28□□□□□ -2.45
TRAV1-1A0A0B4J248 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.28□□□□□ -2.45
TRAV1-1A0A0B4J248 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.29□□□□□ -2.46
TRAV1-1A0A0B4J248 RNY1P16-201ENST00000363063 111 ntBASIC-0.29□□□□□ -2.46
TRAV1-1A0A0B4J248 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.29□□□□□ -2.46
TRAV1-1A0A0B4J248 SNORD14E-201ENST00000364009 85 ntBASIC-0.29□□□□□ -2.46
TRAV1-1A0A0B4J248 SNORA63C-201ENST00000364578 129 ntBASIC-0.29□□□□□ -2.46
TRAV1-1A0A0B4J248 RNA5SP117-201ENST00000365294 118 ntBASIC-0.29□□□□□ -2.46
TRAV1-1A0A0B4J248 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.29□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.29□□□□□ -2.46
TRAV1-1A0A0B4J248 SNORA72-201ENST00000384339 132 ntBASIC-0.29□□□□□ -2.46
TRAV1-1A0A0B4J248 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.29□□□□□ -2.46
TRAV1-1A0A0B4J248 SNORA8.3-201ENST00000384679 139 ntBASIC-0.29□□□□□ -2.46
TRAV1-1A0A0B4J248 MIR802-201ENST00000390235 94 ntBASIC-0.29□□□□□ -2.46
TRAV1-1A0A0B4J248 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.29□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU7-62P-201ENST00000458856 62 ntBASIC-0.29□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU6-625P-201ENST00000459412 107 ntBASIC-0.29□□□□□ -2.46
TRAV1-1A0A0B4J248 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.29□□□□□ -2.46
TRAV1-1A0A0B4J248 SNORA18.4-201ENST00000516440 124 ntBASIC-0.29□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU7-181P-201ENST00000517234 74 ntBASIC-0.29□□□□□ -2.46
TRAV1-1A0A0B4J248 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.29□□□□□ -2.46
TRAV1-1A0A0B4J248 MIR6740-201ENST00000618268 113 ntBASIC-0.29□□□□□ -2.46
TRAV1-1A0A0B4J248 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.3□□□□□ -2.46
TRAV1-1A0A0B4J248 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.3□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU6-364P-201ENST00000384387 107 ntBASIC-0.3□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU6-35P-201ENST00000384530 107 ntBASIC-0.3□□□□□ -2.46
TRAV1-1A0A0B4J248 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.3□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU7-66P-201ENST00000459469 62 ntBASIC-0.3□□□□□ -2.46
TRAV1-1A0A0B4J248 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.3□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU6-448P-201ENST00000517052 107 ntBASIC-0.3□□□□□ -2.46
TRAV1-1A0A0B4J248 AL158211.1-201ENST00000566763 763 ntBASIC-0.3□□□□□ -2.46
TRAV1-1A0A0B4J248 MIR5701-3-201ENST00000578890 82 ntBASIC-0.3□□□□□ -2.46
TRAV1-1A0A0B4J248 MIR4752-201ENST00000579672 72 ntBASIC-0.3□□□□□ -2.46
TRAV1-1A0A0B4J248 MIR4645-201ENST00000583158 77 ntBASIC-0.3□□□□□ -2.46
TRAV1-1A0A0B4J248 MIR3672-201ENST00000584290 82 ntBASIC-0.3□□□□□ -2.46
TRAV1-1A0A0B4J248 MIR5701-1-201ENST00000585138 82 ntBASIC-0.3□□□□□ -2.46
TRAV1-1A0A0B4J248 AC087685.1-201ENST00000587507 141 ntBASIC-0.3□□□□□ -2.46
TRAV1-1A0A0B4J248 AC087752.4-201ENST00000605911 462 ntBASIC-0.3□□□□□ -2.46
TRAV1-1A0A0B4J248 MIR5701-2-201ENST00000615634 82 ntBASIC-0.3□□□□□ -2.46
TRAV1-1A0A0B4J248 AL603755.1-201ENST00000619504 163 ntBASIC-0.3□□□□□ -2.46
TRAV1-1A0A0B4J248 MIR6828-201ENST00000636181 60 ntBASIC-0.3□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU6-268P-201ENST00000364174 107 ntBASIC-0.31□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.31□□□□□ -2.46
TRAV1-1A0A0B4J248 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.31□□□□□ -2.46
TRAV1-1A0A0B4J248 MIR190B-201ENST00000401119 79 ntBASIC-0.31□□□□□ -2.46
TRAV1-1A0A0B4J248 MIR1912-201ENST00000410389 80 ntBASIC-0.31□□□□□ -2.46
TRAV1-1A0A0B4J248 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.31□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU6-847P-201ENST00000411115 108 ntBASIC-0.31□□□□□ -2.46
TRAV1-1A0A0B4J248 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.31□□□□□ -2.46
TRAV1-1A0A0B4J248 SUMO1P3-201ENST00000439961 304 ntBASIC-0.31□□□□□ -2.46
TRAV1-1A0A0B4J248 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.31□□□□□ -2.46
TRAV1-1A0A0B4J248 SNORA40.9-201ENST00000515895 93 ntBASIC-0.31□□□□□ -2.46
TRAV1-1A0A0B4J248 RNA5SP395-201ENST00000516567 118 ntBASIC-0.31□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU6-504P-201ENST00000516568 104 ntBASIC-0.31□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.31□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU7-156P-201ENST00000517214 74 ntBASIC-0.31□□□□□ -2.46
TRAV1-1A0A0B4J248 ZNF519P2-201ENST00000557032 169 ntBASIC-0.31□□□□□ -2.46
TRAV1-1A0A0B4J248 MIR4273-201ENST00000582824 84 ntBASIC-0.31□□□□□ -2.46
TRAV1-1A0A0B4J248 AC005176.2-201ENST00000596933 147 ntBASIC-0.31□□□□□ -2.46
TRAV1-1A0A0B4J248 AC005972.2-201ENST00000604690 348 ntBASIC-0.31□□□□□ -2.46
TRAV1-1A0A0B4J248 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.31□□□□□ -2.46
TRAV1-1A0A0B4J248 SNORD38B-202ENST00000625943 69 ntBASIC-0.31□□□□□ -2.46
TRAV1-1A0A0B4J248 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU6-324P-201ENST00000363957 106 ntBASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 SNORA1.2-201ENST00000365189 134 ntBASIC-0.32□□□□□ -2.46
TRAV1-1A0A0B4J248 RNU6-46P-201ENST00000383860 107 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms