Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb2S4R1M3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.05■□□□□ 0.16
H2afb2S4R1M3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb2S4R1M3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
H2afb2S4R1M3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb2S4R1M3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb2S4R1M3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.04■□□□□ 0.16
H2afb2S4R1M3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb2S4R1M3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb2S4R1M3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb2S4R1M3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb2S4R1M3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb2S4R1M3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb2S4R1M3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb2S4R1M3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb2S4R1M3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb2S4R1M3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb2S4R1M3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb2S4R1M3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.04■□□□□ 0.16
H2afb2S4R1M3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb2S4R1M3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.04■□□□□ 0.16
H2afb2S4R1M3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb2S4R1M3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb2S4R1M3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb2S4R1M3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb2S4R1M3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms