Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h3Q9Z0Y9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h3Q9Z0Y9 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.39■□□□□ 0.37
Nr1h3Q9Z0Y9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h3Q9Z0Y9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h3Q9Z0Y9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h3Q9Z0Y9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h3Q9Z0Y9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Nr1h3Q9Z0Y9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h3Q9Z0Y9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h3Q9Z0Y9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h3Q9Z0Y9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h3Q9Z0Y9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h3Q9Z0Y9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h3Q9Z0Y9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Gm15173-201ENSMUST00000122049 433 ntBASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Gm36967-201ENSMUST00000193814 266 ntBASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Gm9172-201ENSMUST00000212092 954 ntBASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Gm8655-201ENSMUST00000221159 852 ntBASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h3Q9Z0Y9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Gm4459-201ENSMUST00000118750 468 ntBASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Gm2213-201ENSMUST00000197485 688 ntBASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h3Q9Z0Y9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Nr1h3Q9Z0Y9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h3Q9Z0Y9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h3Q9Z0Y9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h3Q9Z0Y9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h3Q9Z0Y9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h3Q9Z0Y9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h3Q9Z0Y9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h3Q9Z0Y9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.36■□□□□ 0.37
Nr1h3Q9Z0Y9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h3Q9Z0Y9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
Nr1h3Q9Z0Y9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.36■□□□□ 0.37
Nr1h3Q9Z0Y9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
Nr1h3Q9Z0Y9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h3Q9Z0Y9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h3Q9Z0Y9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h3Q9Z0Y9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nr1h3Q9Z0Y9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h3Q9Z0Y9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h3Q9Z0Y9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nr1h3Q9Z0Y9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h3Q9Z0Y9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h3Q9Z0Y9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nr1h3Q9Z0Y9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h3Q9Z0Y9 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms