Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.21□□□□□ -0.29
Pfdn5Q9WU28 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn5Q9WU28 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn5Q9WU28 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn5Q9WU28 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn5Q9WU28 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn5Q9WU28 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn5Q9WU28 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn5Q9WU28 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfdn5Q9WU28 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pfdn5Q9WU28 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pfdn5Q9WU28 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pfdn5Q9WU28 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.21□□□□□ -0.3
Pfdn5Q9WU28 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pfdn5Q9WU28 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pfdn5Q9WU28 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pfdn5Q9WU28 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.21□□□□□ -0.3
Pfdn5Q9WU28 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pfdn5Q9WU28 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pfdn5Q9WU28 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pfdn5Q9WU28 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Gm10849-201ENSMUST00000100397 618 ntBASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.2□□□□□ -0.3
Pfdn5Q9WU28 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Gm42569-201ENSMUST00000200539 472 ntBASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn5Q9WU28 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn5Q9WU28 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn5Q9WU28 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn5Q9WU28 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn5Q9WU28 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn5Q9WU28 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn5Q9WU28 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pfdn5Q9WU28 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn5Q9WU28 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn5Q9WU28 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn5Q9WU28 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn5Q9WU28 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn5Q9WU28 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn5Q9WU28 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Pfdn5Q9WU28 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn5Q9WU28 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn5Q9WU28 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn5Q9WU28 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn5Q9WU28 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn5Q9WU28 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn5Q9WU28 Gm4974-201ENSMUST00000209974 875 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms