Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Htra1Q9R118 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Htra1Q9R118 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Htra1Q9R118 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Htra1Q9R118 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Htra1Q9R118 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Htra1Q9R118 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
Htra1Q9R118 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.89□□□□□ -0.03
Htra1Q9R118 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Htra1Q9R118 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Htra1Q9R118 Mir5122-201ENSMUST00000175004 89 ntBASIC14.89□□□□□ -0.03
Htra1Q9R118 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.89□□□□□ -0.03
Htra1Q9R118 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Htra1Q9R118 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Htra1Q9R118 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Htra1Q9R118 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.89□□□□□ -0.03
Htra1Q9R118 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Htra1Q9R118 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Htra1Q9R118 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Htra1Q9R118 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Htra1Q9R118 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Htra1Q9R118 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.89□□□□□ -0.03
Htra1Q9R118 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Htra1Q9R118 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Htra1Q9R118 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Htra1Q9R118 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Htra1Q9R118 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Htra1Q9R118 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.89□□□□□ -0.03
Htra1Q9R118 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Htra1Q9R118 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Htra1Q9R118 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Htra1Q9R118 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Htra1Q9R118 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Htra1Q9R118 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Htra1Q9R118 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Htra1Q9R118 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Htra1Q9R118 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Htra1Q9R118 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Htra1Q9R118 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Htra1Q9R118 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Htra1Q9R118 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Htra1Q9R118 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.88□□□□□ -0.03
Htra1Q9R118 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.88□□□□□ -0.03
Htra1Q9R118 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Htra1Q9R118 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.88□□□□□ -0.03
Htra1Q9R118 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.88□□□□□ -0.03
Htra1Q9R118 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Htra1Q9R118 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.88□□□□□ -0.03
Htra1Q9R118 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.88□□□□□ -0.03
Htra1Q9R118 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.88□□□□□ -0.03
Htra1Q9R118 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Htra1Q9R118 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Htra1Q9R118 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Htra1Q9R118 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Htra1Q9R118 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Htra1Q9R118 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Htra1Q9R118 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Htra1Q9R118 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Htra1Q9R118 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Htra1Q9R118 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Htra1Q9R118 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Htra1Q9R118 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Htra1Q9R118 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Htra1Q9R118 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Htra1Q9R118 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Htra1Q9R118 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Htra1Q9R118 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Htra1Q9R118 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Htra1Q9R118 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.87□□□□□ -0.03
Htra1Q9R118 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Htra1Q9R118 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Htra1Q9R118 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Htra1Q9R118 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Htra1Q9R118 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Htra1Q9R118 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.87□□□□□ -0.03
Htra1Q9R118 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.87□□□□□ -0.03
Htra1Q9R118 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.87□□□□□ -0.03
Htra1Q9R118 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Htra1Q9R118 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Htra1Q9R118 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Htra1Q9R118 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Htra1Q9R118 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Htra1Q9R118 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Htra1Q9R118 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Htra1Q9R118 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.87□□□□□ -0.03
Htra1Q9R118 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Htra1Q9R118 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Htra1Q9R118 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Htra1Q9R118 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Htra1Q9R118 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Htra1Q9R118 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Htra1Q9R118 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Htra1Q9R118 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Htra1Q9R118 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Htra1Q9R118 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Htra1Q9R118 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Htra1Q9R118 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Htra1Q9R118 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Htra1Q9R118 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Htra1Q9R118 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms