Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn2Q9R0A1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn2Q9R0A1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.42■□□□□ 0.22
Clcn2Q9R0A1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn2Q9R0A1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn2Q9R0A1 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 AA414768-201ENSMUST00000121924 1257 ntBASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn2Q9R0A1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Clcn2Q9R0A1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 App-207ENSMUST00000227737 2827 ntBASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Gm11355-201ENSMUST00000121120 306 ntBASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Gm5587-201ENSMUST00000206270 674 ntBASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn2Q9R0A1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn2Q9R0A1 Phf7-203ENSMUST00000226565 1971 ntBASIC16.38■□□□□ 0.21
Clcn2Q9R0A1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms