Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Gm38285-201ENSMUST00000192928 922 ntBASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.43□□□□□ -0.1
Trem1Q9JKE2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.43□□□□□ -0.1
Trem1Q9JKE2 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.43□□□□□ -0.1
Trem1Q9JKE2 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trem1Q9JKE2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trem1Q9JKE2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Trem1Q9JKE2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms