Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scn5aQ9JJV9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn5aQ9JJV9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Scn5aQ9JJV9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Scn5aQ9JJV9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn5aQ9JJV9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Scn5aQ9JJV9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Scn5aQ9JJV9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn5aQ9JJV9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Gm15427-201ENSMUST00000117288 531 ntBASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Gm11025-201ENSMUST00000140773 466 ntBASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Gm27321-201ENSMUST00000185021 205 ntBASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn5aQ9JJV9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.46■□□□□ 0.23
Scn5aQ9JJV9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
Scn5aQ9JJV9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn5aQ9JJV9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scn5aQ9JJV9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn5aQ9JJV9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn5aQ9JJV9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn5aQ9JJV9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn5aQ9JJV9 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.46■□□□□ 0.23
Scn5aQ9JJV9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.46■□□□□ 0.23
Scn5aQ9JJV9 Gm15920-201ENSMUST00000118998 402 ntBASIC16.46■□□□□ 0.23
Scn5aQ9JJV9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.46■□□□□ 0.23
Scn5aQ9JJV9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Scn5aQ9JJV9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn5aQ9JJV9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scn5aQ9JJV9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Scn5aQ9JJV9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scn5aQ9JJV9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scn5aQ9JJV9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Gm13616-201ENSMUST00000120600 222 ntBASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Gm11745-201ENSMUST00000121669 448 ntBASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.45■□□□□ 0.22
Scn5aQ9JJV9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms