Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ube3bQ9ES34 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ube3bQ9ES34 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube3bQ9ES34 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube3bQ9ES34 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube3bQ9ES34 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube3bQ9ES34 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube3bQ9ES34 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube3bQ9ES34 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube3bQ9ES34 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ube3bQ9ES34 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube3bQ9ES34 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube3bQ9ES34 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Ube3bQ9ES34 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube3bQ9ES34 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ube3bQ9ES34 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ube3bQ9ES34 Gm7230-201ENSMUST00000173026 815 ntBASIC19.03■□□□□ 0.64
Ube3bQ9ES34 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.03■□□□□ 0.64
Ube3bQ9ES34 Gm18733-201ENSMUST00000173950 856 ntBASIC19.03■□□□□ 0.64
Ube3bQ9ES34 Gm44771-201ENSMUST00000206975 626 ntBASIC19.03■□□□□ 0.64
Ube3bQ9ES34 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.03■□□□□ 0.64
Ube3bQ9ES34 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube3bQ9ES34 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.03■□□□□ 0.64
Ube3bQ9ES34 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ube3bQ9ES34 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ube3bQ9ES34 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube3bQ9ES34 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube3bQ9ES34 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube3bQ9ES34 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube3bQ9ES34 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.02■□□□□ 0.64
Ube3bQ9ES34 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ube3bQ9ES34 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ube3bQ9ES34 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube3bQ9ES34 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube3bQ9ES34 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube3bQ9ES34 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube3bQ9ES34 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.02■□□□□ 0.64
Ube3bQ9ES34 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube3bQ9ES34 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ube3bQ9ES34 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.02■□□□□ 0.64
Ube3bQ9ES34 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ube3bQ9ES34 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ube3bQ9ES34 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.02■□□□□ 0.63
Ube3bQ9ES34 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
Ube3bQ9ES34 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ube3bQ9ES34 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ube3bQ9ES34 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.02■□□□□ 0.63
Ube3bQ9ES34 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.01■□□□□ 0.63
Ube3bQ9ES34 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Gm2651-201ENSMUST00000203560 838 ntBASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.01■□□□□ 0.63
Ube3bQ9ES34 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ube3bQ9ES34 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ube3bQ9ES34 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ube3bQ9ES34 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ube3bQ9ES34 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ube3bQ9ES34 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ube3bQ9ES34 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ube3bQ9ES34 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ube3bQ9ES34 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19■□□□□ 0.63
Ube3bQ9ES34 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ube3bQ9ES34 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ube3bQ9ES34 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ube3bQ9ES34 Mir5131-201ENSMUST00000175426 93 ntBASIC19■□□□□ 0.63
Ube3bQ9ES34 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19■□□□□ 0.63
Ube3bQ9ES34 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19■□□□□ 0.63
Ube3bQ9ES34 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19■□□□□ 0.63
Ube3bQ9ES34 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ube3bQ9ES34 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19■□□□□ 0.63
Ube3bQ9ES34 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19■□□□□ 0.63
Ube3bQ9ES34 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ube3bQ9ES34 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ube3bQ9ES34 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19■□□□□ 0.63
Ube3bQ9ES34 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms