Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn3Q9DCB1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Hmgn3Q9DCB1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn3Q9DCB1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.12■□□□□ 0.01
Hmgn3Q9DCB1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn3Q9DCB1 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.12■□□□□ 0.01
Hmgn3Q9DCB1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn3Q9DCB1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn3Q9DCB1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn3Q9DCB1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.12■□□□□ 0.01
Hmgn3Q9DCB1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn3Q9DCB1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn3Q9DCB1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn3Q9DCB1 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.12■□□□□ 0.01
Hmgn3Q9DCB1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn3Q9DCB1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn3Q9DCB1 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn3Q9DCB1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgn3Q9DCB1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgn3Q9DCB1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgn3Q9DCB1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgn3Q9DCB1 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.09■□□□□ 0.01
Hmgn3Q9DCB1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgn3Q9DCB1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgn3Q9DCB1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgn3Q9DCB1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgn3Q9DCB1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgn3Q9DCB1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Hmgn3Q9DCB1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgn3Q9DCB1 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgn3Q9DCB1 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgn3Q9DCB1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Hmgn3Q9DCB1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgn3Q9DCB1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgn3Q9DCB1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Hmgn3Q9DCB1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgn3Q9DCB1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgn3Q9DCB1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
Hmgn3Q9DCB1 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.08■□□□□ 0.01
Hmgn3Q9DCB1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.08■□□□□ 0.01
Hmgn3Q9DCB1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.08■□□□□ 0.01
Hmgn3Q9DCB1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hmgn3Q9DCB1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hmgn3Q9DCB1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgn3Q9DCB1 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgn3Q9DCB1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.08■□□□□ 0
Hmgn3Q9DCB1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hmgn3Q9DCB1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms