Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gtf3c6Q9D8P7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gtf3c6Q9D8P7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Gtf3c6Q9D8P7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gtf3c6Q9D8P7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gtf3c6Q9D8P7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gtf3c6Q9D8P7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gtf3c6Q9D8P7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gtf3c6Q9D8P7 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gtf3c6Q9D8P7 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gtf3c6Q9D8P7 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.16■□□□□ 0.34
Gtf3c6Q9D8P7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gtf3c6Q9D8P7 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gtf3c6Q9D8P7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gtf3c6Q9D8P7 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gtf3c6Q9D8P7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gtf3c6Q9D8P7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gtf3c6Q9D8P7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gtf3c6Q9D8P7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gtf3c6Q9D8P7 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gtf3c6Q9D8P7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.16■□□□□ 0.34
Gtf3c6Q9D8P7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gtf3c6Q9D8P7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gtf3c6Q9D8P7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Gm6345-202ENSMUST00000180900 204 ntBASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gtf3c6Q9D8P7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gtf3c6Q9D8P7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gtf3c6Q9D8P7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gtf3c6Q9D8P7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Gtf3c6Q9D8P7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gtf3c6Q9D8P7 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gtf3c6Q9D8P7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.14■□□□□ 0.33
Gtf3c6Q9D8P7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gtf3c6Q9D8P7 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gtf3c6Q9D8P7 Gm11950-201ENSMUST00000121615 838 ntBASIC17.14■□□□□ 0.33
Gtf3c6Q9D8P7 Gm6659-201ENSMUST00000174752 547 ntBASIC17.14■□□□□ 0.33
Gtf3c6Q9D8P7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gtf3c6Q9D8P7 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gtf3c6Q9D8P7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gtf3c6Q9D8P7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.14■□□□□ 0.33
Gtf3c6Q9D8P7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gtf3c6Q9D8P7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gtf3c6Q9D8P7 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.14■□□□□ 0.33
Gtf3c6Q9D8P7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gtf3c6Q9D8P7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gtf3c6Q9D8P7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gtf3c6Q9D8P7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gtf3c6Q9D8P7 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Gtf3c6Q9D8P7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gtf3c6Q9D8P7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gtf3c6Q9D8P7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gtf3c6Q9D8P7 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gtf3c6Q9D8P7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gtf3c6Q9D8P7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Gtf3c6Q9D8P7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gtf3c6Q9D8P7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Gtf3c6Q9D8P7 Gm45328-201ENSMUST00000210942 917 ntBASIC17.13■□□□□ 0.33
Gtf3c6Q9D8P7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gtf3c6Q9D8P7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gtf3c6Q9D8P7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gtf3c6Q9D8P7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gtf3c6Q9D8P7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Gtf3c6Q9D8P7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gtf3c6Q9D8P7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gtf3c6Q9D8P7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gtf3c6Q9D8P7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf3c6Q9D8P7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf3c6Q9D8P7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf3c6Q9D8P7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gtf3c6Q9D8P7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf3c6Q9D8P7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf3c6Q9D8P7 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.12■□□□□ 0.33
Gtf3c6Q9D8P7 Gm23634-201ENSMUST00000175071 91 ntBASIC17.12■□□□□ 0.33
Gtf3c6Q9D8P7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf3c6Q9D8P7 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.12■□□□□ 0.33
Gtf3c6Q9D8P7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms