Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sh2d4aQ9D7V1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Sh2d4aQ9D7V1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2d4aQ9D7V1 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2d4aQ9D7V1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2d4aQ9D7V1 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2d4aQ9D7V1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2d4aQ9D7V1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2d4aQ9D7V1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2d4aQ9D7V1 Gm715-201ENSMUST00000117865 831 ntBASIC15.58■□□□□ 0.08
Sh2d4aQ9D7V1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2d4aQ9D7V1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.58■□□□□ 0.08
Sh2d4aQ9D7V1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2d4aQ9D7V1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2d4aQ9D7V1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2d4aQ9D7V1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2d4aQ9D7V1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Sh2d4aQ9D7V1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2d4aQ9D7V1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Sh2d4aQ9D7V1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2d4aQ9D7V1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2d4aQ9D7V1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.57■□□□□ 0.08
Sh2d4aQ9D7V1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2d4aQ9D7V1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2d4aQ9D7V1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2d4aQ9D7V1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2d4aQ9D7V1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2d4aQ9D7V1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2d4aQ9D7V1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2d4aQ9D7V1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.57■□□□□ 0.08
Sh2d4aQ9D7V1 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.57■□□□□ 0.08
Sh2d4aQ9D7V1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2d4aQ9D7V1 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.57■□□□□ 0.08
Sh2d4aQ9D7V1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2d4aQ9D7V1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Sh2d4aQ9D7V1 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Sh2d4aQ9D7V1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2d4aQ9D7V1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2d4aQ9D7V1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2d4aQ9D7V1 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2d4aQ9D7V1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2d4aQ9D7V1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.56■□□□□ 0.08
Sh2d4aQ9D7V1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2d4aQ9D7V1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.56■□□□□ 0.08
Sh2d4aQ9D7V1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.56■□□□□ 0.08
Sh2d4aQ9D7V1 Gm21814-202ENSMUST00000203277 873 ntBASIC15.56■□□□□ 0.08
Sh2d4aQ9D7V1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2d4aQ9D7V1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.56■□□□□ 0.08
Sh2d4aQ9D7V1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2d4aQ9D7V1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2d4aQ9D7V1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Sh2d4aQ9D7V1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2d4aQ9D7V1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2d4aQ9D7V1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2d4aQ9D7V1 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Sh2d4aQ9D7V1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2d4aQ9D7V1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2d4aQ9D7V1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Phf7-203ENSMUST00000226565 1971 ntBASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh2d4aQ9D7V1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.54■□□□□ 0.08
Sh2d4aQ9D7V1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh2d4aQ9D7V1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh2d4aQ9D7V1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sh2d4aQ9D7V1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh2d4aQ9D7V1 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh2d4aQ9D7V1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Sh2d4aQ9D7V1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh2d4aQ9D7V1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh2d4aQ9D7V1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Sh2d4aQ9D7V1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh2d4aQ9D7V1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.54■□□□□ 0.08
Sh2d4aQ9D7V1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.54■□□□□ 0.08
Sh2d4aQ9D7V1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.54■□□□□ 0.08
Sh2d4aQ9D7V1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms