Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShpkQ9D5J6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.46□□□□□ -0.25
ShpkQ9D5J6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ShpkQ9D5J6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
ShpkQ9D5J6 Gm27000-201ENSMUST00000182943 842 ntBASIC13.46□□□□□ -0.25
ShpkQ9D5J6 Gm7291-201ENSMUST00000199147 382 ntBASIC13.46□□□□□ -0.25
ShpkQ9D5J6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShpkQ9D5J6 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.46□□□□□ -0.25
ShpkQ9D5J6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ShpkQ9D5J6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
ShpkQ9D5J6 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
ShpkQ9D5J6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
ShpkQ9D5J6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
ShpkQ9D5J6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
ShpkQ9D5J6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Gm43034-201ENSMUST00000198678 1364 ntBASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ShpkQ9D5J6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Gm17661-201ENSMUST00000170317 270 ntBASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Gm5408-201ENSMUST00000197998 747 ntBASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Gm10138-203ENSMUST00000206952 366 ntBASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Gm7514-201ENSMUST00000209475 934 ntBASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShpkQ9D5J6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShpkQ9D5J6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.43□□□□□ -0.26
ShpkQ9D5J6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms