Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Gm15467-201ENSMUST00000120582 445 ntBASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Stag1Q9D3E6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.05■□□□□ 0.64
Stag1Q9D3E6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Stag1Q9D3E6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Stag1Q9D3E6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Stag1Q9D3E6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Stag1Q9D3E6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Stag1Q9D3E6 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.05■□□□□ 0.64
Stag1Q9D3E6 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.05■□□□□ 0.64
Stag1Q9D3E6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Stag1Q9D3E6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.05■□□□□ 0.64
Stag1Q9D3E6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.05■□□□□ 0.64
Stag1Q9D3E6 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.05■□□□□ 0.64
Stag1Q9D3E6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.05■□□□□ 0.64
Stag1Q9D3E6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Stag1Q9D3E6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Stag1Q9D3E6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Stag1Q9D3E6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Stag1Q9D3E6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Stag1Q9D3E6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Stag1Q9D3E6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Stag1Q9D3E6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Stag1Q9D3E6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Stag1Q9D3E6 Gm14140-201ENSMUST00000119999 995 ntBASIC19.04■□□□□ 0.64
Stag1Q9D3E6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.04■□□□□ 0.64
Stag1Q9D3E6 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Stag1Q9D3E6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.04■□□□□ 0.64
Stag1Q9D3E6 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Stag1Q9D3E6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Stag1Q9D3E6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Stag1Q9D3E6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Stag1Q9D3E6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Stag1Q9D3E6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Stag1Q9D3E6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Stag1Q9D3E6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Stag1Q9D3E6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Stag1Q9D3E6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Stag1Q9D3E6 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.04■□□□□ 0.64
Stag1Q9D3E6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Stag1Q9D3E6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Stag1Q9D3E6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Gm12260-201ENSMUST00000122447 411 ntBASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Stag1Q9D3E6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Stag1Q9D3E6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Stag1Q9D3E6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Stag1Q9D3E6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Stag1Q9D3E6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Stag1Q9D3E6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Stag1Q9D3E6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Stag1Q9D3E6 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Stag1Q9D3E6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Stag1Q9D3E6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms