Protein–RNA interactions for Protein: Q9D394

Rufy3, Protein RUFY3, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy3Q9D394 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rufy3Q9D394 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rufy3Q9D394 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rufy3Q9D394 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rufy3Q9D394 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rufy3Q9D394 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.85■□□□□ 0.61
Rufy3Q9D394 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rufy3Q9D394 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Gm9013-201ENSMUST00000132939 882 ntBASIC18.84■□□□□ 0.61
Rufy3Q9D394 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rufy3Q9D394 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
Rufy3Q9D394 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rufy3Q9D394 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rufy3Q9D394 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rufy3Q9D394 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rufy3Q9D394 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.83■□□□□ 0.61
Rufy3Q9D394 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.83■□□□□ 0.61
Rufy3Q9D394 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rufy3Q9D394 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Rufy3Q9D394 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Rufy3Q9D394 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rufy3Q9D394 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Rufy3Q9D394 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rufy3Q9D394 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Rufy3Q9D394 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Rufy3Q9D394 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rufy3Q9D394 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Rufy3Q9D394 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.83■□□□□ 0.6
Rufy3Q9D394 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rufy3Q9D394 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rufy3Q9D394 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rufy3Q9D394 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rufy3Q9D394 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rufy3Q9D394 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Rufy3Q9D394 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.83■□□□□ 0.6
Rufy3Q9D394 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rufy3Q9D394 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rufy3Q9D394 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rufy3Q9D394 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rufy3Q9D394 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.82■□□□□ 0.6
Rufy3Q9D394 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rufy3Q9D394 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rufy3Q9D394 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rufy3Q9D394 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.81■□□□□ 0.6
Rufy3Q9D394 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rufy3Q9D394 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rufy3Q9D394 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rufy3Q9D394 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
Rufy3Q9D394 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rufy3Q9D394 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rufy3Q9D394 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rufy3Q9D394 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rufy3Q9D394 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rufy3Q9D394 Gm5587-201ENSMUST00000206270 674 ntBASIC18.8■□□□□ 0.6
Rufy3Q9D394 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms