Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Mir770-201ENSMUST00000103252 94 ntBASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Gm25016-201ENSMUST00000158399 131 ntBASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc80Q9D0F1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.33■□□□□ 0.21
Ndc80Q9D0F1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ndc80Q9D0F1 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Ndc80Q9D0F1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ndc80Q9D0F1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Ndc80Q9D0F1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ndc80Q9D0F1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ndc80Q9D0F1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndc80Q9D0F1 AA414768-201ENSMUST00000121924 1257 ntBASIC16.33■□□□□ 0.2
Ndc80Q9D0F1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.33■□□□□ 0.2
Ndc80Q9D0F1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Ndc80Q9D0F1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ndc80Q9D0F1 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.33■□□□□ 0.2
Ndc80Q9D0F1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndc80Q9D0F1 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.33■□□□□ 0.2
Ndc80Q9D0F1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndc80Q9D0F1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndc80Q9D0F1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndc80Q9D0F1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndc80Q9D0F1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.33■□□□□ 0.2
Ndc80Q9D0F1 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ndc80Q9D0F1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndc80Q9D0F1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc80Q9D0F1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Gm6623-201ENSMUST00000173570 544 ntBASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms