Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim13Q9CYB0 Gm13168-201ENSMUST00000121771 632 ntBASIC14.87□□□□□ -0.03
Trim13Q9CYB0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trim13Q9CYB0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim13Q9CYB0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim13Q9CYB0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim13Q9CYB0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim13Q9CYB0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim13Q9CYB0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim13Q9CYB0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim13Q9CYB0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim13Q9CYB0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim13Q9CYB0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim13Q9CYB0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Gm22240-201ENSMUST00000175225 82 ntBASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim13Q9CYB0 Prob1-201ENSMUST00000097619 3021 ntBASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.84□□□□□ -0.03
Trim13Q9CYB0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim13Q9CYB0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim13Q9CYB0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim13Q9CYB0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms